RNA–Protein interactions for RNA: ENST00000389194.6

LTN1-202, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 1 (best) BASIC

Gene LTN1, Length 7,749 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-202ENST00000389194 C1orf43Q9BWL3 253 aa3.73□□□□□ -1.81
LTN1-202ENST00000389194 ORMDL1Q9P0S3 153 aa3.73□□□□□ -1.81
LTN1-202ENST00000389194 FRYQ5TBA9 3013 aa3.73□□□□□ -1.81
LTN1-202ENST00000389194 A0A1B0GX51 115 aa3.73□□□□□ -1.81
LTN1-202ENST00000389194 AVPP01185 164 aa3.73□□□□□ -1.81
LTN1-202ENST00000389194 Q6ZSV7 163 aa3.73□□□□□ -1.81
LTN1-202ENST00000389194 ZFAND2AQ8N6M9 145 aa3.73□□□□□ -1.81
LTN1-202ENST00000389194 DSPP15924 2871 aaKnown RBP3.73□□□□□ -1.81
LTN1-202ENST00000389194 IGKV2-24A0A0C4DH68 120 aa3.73□□□□□ -1.81
LTN1-202ENST00000389194 XAGE1AQ9HD64 81 aa3.73□□□□□ -1.81
LTN1-202ENST00000389194 A0A0J9YXY3 114 aa3.73□□□□□ -1.81
LTN1-202ENST00000389194 GHRHP01286 108 aa3.73□□□□□ -1.81
LTN1-202ENST00000389194 RBM3P98179 157 aaKnown RBP3.73□□□□□ -1.81
LTN1-202ENST00000389194 OVOL2Q9BRP0 275 aa3.73□□□□□ -1.81
LTN1-202ENST00000389194 REV3LO60673 3130 aa3.72□□□□□ -1.81
LTN1-202ENST00000389194 IGHV1-58A0A0C4DH39 117 aa3.72□□□□□ -1.81
LTN1-202ENST00000389194 F8W735 103 aaPredicted RBP3.72□□□□□ -1.81
LTN1-202ENST00000389194 C2orf91Q6ZV80 131 aa3.72□□□□□ -1.81
LTN1-202ENST00000389194 C16orf74Q96GX8 76 aa3.72□□□□□ -1.81
LTN1-202ENST00000389194 MGAM2Q2M2H8 2515 aa3.72□□□□□ -1.81
LTN1-202ENST00000389194 LY6LH3BQJ8 138 aa3.72□□□□□ -1.81
LTN1-202ENST00000389194 RNF183Q96D59 192 aa3.72□□□□□ -1.81
LTN1-202ENST00000389194 NBEAQ8NFP9 2946 aa3.72□□□□□ -1.81
LTN1-202ENST00000389194 A0A1W2PPR1 153 aa3.72□□□□□ -1.81
LTN1-202ENST00000389194 INAFM1C9JVW0 142 aa3.72□□□□□ -1.81
LTN1-202ENST00000389194 SDIM1Q6ZPB5 146 aa3.72□□□□□ -1.81
LTN1-202ENST00000389194 TRAV23DV6A0A075B6W5 121 aa3.72□□□□□ -1.81
LTN1-202ENST00000389194 DAZ2Q13117 558 aaKnown RBP3.72□□□□□ -1.81
LTN1-202ENST00000389194 DAZ4Q86SG3 579 aaKnown RBP3.72□□□□□ -1.81
LTN1-202ENST00000389194 DAZ3Q9NR90 486 aaKnown RBP3.72□□□□□ -1.81
LTN1-202ENST00000389194 HECTD1Q9ULT8 2610 aa3.72□□□□□ -1.81
LTN1-202ENST00000389194 CRIP2P52943 208 aaPredicted RBP3.72□□□□□ -1.81
LTN1-202ENST00000389194 SPAG11BQ08648 103 aa3.72□□□□□ -1.81
LTN1-202ENST00000389194 RBMY1FQ15415 496 aaKnown RBP3.72□□□□□ -1.81
LTN1-202ENST00000389194 URB1-AS1Q96HZ7 61 aa3.72□□□□□ -1.81
LTN1-202ENST00000389194 LINC00574Q9H8X3 128 aa3.72□□□□□ -1.81
LTN1-202ENST00000389194 FAM222AQ5U5X8 452 aa3.72□□□□□ -1.81
LTN1-202ENST00000389194 NEXN-AS1Q8NBZ9 246 aa3.72□□□□□ -1.81
LTN1-202ENST00000389194 ZNF580Q9UK33 172 aa3.72□□□□□ -1.81
LTN1-202ENST00000389194 CFAP47Q6ZTR5 3102 aa3.71□□□□□ -1.81
LTN1-202ENST00000389194 IGLV4-3A0A075B6K6 122 aa3.71□□□□□ -1.81
LTN1-202ENST00000389194 TRBV6-1A0A0K0K1D8 114 aa3.71□□□□□ -1.81
LTN1-202ENST00000389194 SPART-AS1P0CW21 52 aa3.71□□□□□ -1.81
LTN1-202ENST00000389194 MYCNOSP40205 109 aa3.71□□□□□ -1.81
LTN1-202ENST00000389194 KRTAP10-9P60411 292 aa3.71□□□□□ -1.81
LTN1-202ENST00000389194 MAST4O15021 2626 aa3.71□□□□□ -1.81
LTN1-202ENST00000389194 RNASE3P12724 160 aaKnown RBP3.71□□□□□ -1.82
LTN1-202ENST00000389194 CLPSL1A2RUU4 121 aa3.71□□□□□ -1.82
LTN1-202ENST00000389194 PLA2G2AP14555 144 aa3.71□□□□□ -1.82
LTN1-202ENST00000389194 PRO3102Q9H379 93 aa3.71□□□□□ -1.82
LTN1-202ENST00000389194 HIGD1BQ9P298 99 aa3.71□□□□□ -1.82
LTN1-202ENST00000389194 ZNF22P17026 224 aaPredicted RBP3.71□□□□□ -1.82
LTN1-202ENST00000389194 IGHV4-31P0DP07 118 aa3.71□□□□□ -1.82
LTN1-202ENST00000389194 K7EMT4 169 aa3.71□□□□□ -1.82
LTN1-202ENST00000389194 K7EQG2 157 aa3.71□□□□□ -1.82
LTN1-202ENST00000389194 TRIAP1O43715 76 aa3.71□□□□□ -1.82
LTN1-202ENST00000389194 C5orf47Q569G3 176 aa3.71□□□□□ -1.82
LTN1-202ENST00000389194 ETDCA0A1B0GVM5 59 aa3.7□□□□□ -1.82
LTN1-202ENST00000389194 M0QY20 66 aa3.7□□□□□ -1.82
LTN1-202ENST00000389194 NRACQ8N912 160 aa3.7□□□□□ -1.82
LTN1-202ENST00000389194 BOD1L1Q8NFC6 3051 aa3.7□□□□□ -1.82
LTN1-202ENST00000389194 DEFB114Q30KQ6 69 aa3.7□□□□□ -1.82
LTN1-202ENST00000389194 C4orf3Q8WVX3 66 aa3.7□□□□□ -1.82
LTN1-202ENST00000389194 FBXL19-AS1Q494R0 122 aa3.7□□□□□ -1.82
LTN1-202ENST00000389194 TMEM263Q8WUH6 116 aaKnown RBP3.7□□□□□ -1.82
LTN1-202ENST00000389194 TRBV10-2A0A0K0K1G8 114 aa3.7□□□□□ -1.82
LTN1-202ENST00000389194 SPANXB1Q9NS25 103 aaPredicted RBP3.7□□□□□ -1.82
LTN1-202ENST00000389194 HERV-K104P63124 156 aa3.7□□□□□ -1.82
LTN1-202ENST00000389194 C9orf66Q5T8R8 295 aa3.7□□□□□ -1.82
LTN1-202ENST00000389194 CFAP126Q5VTH2 177 aa3.7□□□□□ -1.82
LTN1-202ENST00000389194 C11orf71Q6IPW1 123 aa3.69□□□□□ -1.82
LTN1-202ENST00000389194 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.69□□□□□ -1.82
LTN1-202ENST00000389194 TNFRSF13BO14836 293 aaPredicted RBP3.69□□□□□ -1.82
LTN1-202ENST00000389194 RBX1P62877 108 aa3.69□□□□□ -1.82
LTN1-202ENST00000389194 WFDC9Q8NEX5 89 aa3.69□□□□□ -1.82
LTN1-202ENST00000389194 BBC3Q96PG8 261 aaPredicted RBP3.69□□□□□ -1.82
LTN1-202ENST00000389194 MIAQ16674 131 aa3.69□□□□□ -1.82
LTN1-202ENST00000389194 ZMAT4Q9H898 229 aa3.69□□□□□ -1.82
LTN1-202ENST00000389194 POM121L12Q8N7R1 296 aa3.68□□□□□ -1.82
LTN1-202ENST00000389194 A0A0B4J2C4 111 aa3.68□□□□□ -1.82
LTN1-202ENST00000389194 TMEM223A0PJW6 202 aa3.68□□□□□ -1.82
LTN1-202ENST00000389194 PRR3P79522 188 aaKnown RBP3.68□□□□□ -1.82
LTN1-202ENST00000389194 USP34Q70CQ2 3546 aa3.68□□□□□ -1.82
LTN1-202ENST00000389194 MRPS12O15235 138 aaKnown RBP3.68□□□□□ -1.82
LTN1-202ENST00000389194 TIRAPP58753 221 aa3.68□□□□□ -1.82
LTN1-202ENST00000389194 IGKV2-28A0A075B6P5 120 aa3.68□□□□□ -1.82
LTN1-202ENST00000389194 IGKV2D-28P01615 120 aa3.68□□□□□ -1.82
LTN1-202ENST00000389194 REG3AQ06141 175 aa3.68□□□□□ -1.82
LTN1-202ENST00000389194 HIGD2AQ9BW72 106 aa3.68□□□□□ -1.82
LTN1-202ENST00000389194 TRBV10-1A0A0K0K1A3 114 aa3.68□□□□□ -1.82
LTN1-202ENST00000389194 Q6YL49 198 aa3.68□□□□□ -1.82
LTN1-202ENST00000389194 PRO0255Q9UI72 69 aa3.68□□□□□ -1.82
LTN1-202ENST00000389194 IGLV2-18A0A075B6J9 118 aa3.68□□□□□ -1.82
LTN1-202ENST00000389194 TSHBP01222 138 aa3.68□□□□□ -1.82
LTN1-202ENST00000389194 CHCHD10Q8WYQ3 142 aaPredicted RBP3.68□□□□□ -1.82
LTN1-202ENST00000389194 TM2D2Q9BX73 214 aa3.68□□□□□ -1.82
LTN1-202ENST00000389194 LRCOL1A6NCL2 159 aa3.67□□□□□ -1.82
LTN1-202ENST00000389194 NREPQ16612 68 aa3.67□□□□□ -1.82
LTN1-202ENST00000389194 A0A0J9YWU9 116 aa3.67□□□□□ -1.82
LTN1-202ENST00000389194 PSMB8P28062 276 aa3.67□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 96.1 ms