RNA–Protein interactions for RNA: ENST00000381209.7

RPAIN-203, Transcript of RPA interacting protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPAIN, Length 1,535 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-203ENST00000381209 TMEM243Q9BU79 118 aa12.17□□□□□ -0.46
RPAIN-203ENST00000381209 TEP1Q99973 2627 aaKnown RBP12.17□□□□□ -0.46
RPAIN-203ENST00000381209 ZNF815PA8K554 130 aa12.16□□□□□ -0.46
RPAIN-203ENST00000381209 LEPROTO15243 131 aa12.16□□□□□ -0.46
RPAIN-203ENST00000381209 Q8NAQ8 132 aa12.16□□□□□ -0.46
RPAIN-203ENST00000381209 ATRQ13535 2644 aa12.16□□□□□ -0.46
RPAIN-203ENST00000381209 TENM1Q9UKZ4 2725 aa12.16□□□□□ -0.46
RPAIN-203ENST00000381209 A6NDN8 102 aa12.16□□□□□ -0.46
RPAIN-203ENST00000381209 UBE2D1P51668 147 aa12.16□□□□□ -0.46
RPAIN-203ENST00000381209 KRTAP10-11P60412 298 aa12.16□□□□□ -0.46
RPAIN-203ENST00000381209 RNASE13Q5GAN3 156 aaKnown RBP12.16□□□□□ -0.46
RPAIN-203ENST00000381209 PRO0255Q9UI72 69 aa12.16□□□□□ -0.46
RPAIN-203ENST00000381209 TAX1BP3O14907 124 aa12.15□□□□□ -0.46
RPAIN-203ENST00000381209 TIRAPP58753 221 aa12.15□□□□□ -0.46
RPAIN-203ENST00000381209 TM2D2Q9BX73 214 aa12.15□□□□□ -0.46
RPAIN-203ENST00000381209 COX11Q9Y6N1 276 aa12.15□□□□□ -0.46
RPAIN-203ENST00000381209 J3QQQ9 107 aa12.14□□□□□ -0.47
RPAIN-203ENST00000381209 UBE2L6O14933 153 aa12.14□□□□□ -0.47
RPAIN-203ENST00000381209 PLEKHB2Q96CS7 222 aa12.14□□□□□ -0.47
RPAIN-203ENST00000381209 NOTCH3Q9UM47 2321 aa12.13□□□□□ -0.47
RPAIN-203ENST00000381209 TRBV6-8A0A0A6YYG3 113 aa12.13□□□□□ -0.47
RPAIN-203ENST00000381209 LGALS3P17931 250 aaKnown RBP12.13□□□□□ -0.47
RPAIN-203ENST00000381209 FAM19A3Q7Z5A8 133 aa12.13□□□□□ -0.47
RPAIN-203ENST00000381209 CEND1Q8N111 149 aa12.13□□□□□ -0.47
RPAIN-203ENST00000381209 OR5A1Q8NGJ0 315 aa12.13□□□□□ -0.47
RPAIN-203ENST00000381209 VWFP04275 2813 aa12.12□□□□□ -0.47
RPAIN-203ENST00000381209 GCSHP23434 173 aa12.12□□□□□ -0.47
RPAIN-203ENST00000381209 TSPEAR-AS2P59090 65 aa12.12□□□□□ -0.47
RPAIN-203ENST00000381209 AMMECR1LQ6DCA0 310 aa12.12□□□□□ -0.47
RPAIN-203ENST00000381209 TMEM101Q96IK0 257 aa12.12□□□□□ -0.47
RPAIN-203ENST00000381209 CDC42SE2Q9NRR3 84 aa12.12□□□□□ -0.47
RPAIN-203ENST00000381209 IGLV5-45A0A087WSX0 123 aa12.11□□□□□ -0.47
RPAIN-203ENST00000381209 SPART-AS1P0CW21 52 aa12.11□□□□□ -0.47
RPAIN-203ENST00000381209 GYPEP15421 78 aa12.11□□□□□ -0.47
RPAIN-203ENST00000381209 DAD1P61803 113 aa12.11□□□□□ -0.47
RPAIN-203ENST00000381209 GEMIN7Q9H840 131 aaKnown RBP12.11□□□□□ -0.47
RPAIN-203ENST00000381209 H3BRM9 83 aa12.11□□□□□ -0.47
RPAIN-203ENST00000381209 DEFB4AO15263 64 aa12.11□□□□□ -0.47
RPAIN-203ENST00000381209 SCGB1D4Q6XE38 83 aa12.11□□□□□ -0.47
RPAIN-203ENST00000381209 ATP6V0E2Q8NHE4 81 aa12.11□□□□□ -0.47
RPAIN-203ENST00000381209 HIST1H4GQ99525 98 aa12.11□□□□□ -0.47
RPAIN-203ENST00000381209 TEX48A0A1B0GUV7 120 aa12.1□□□□□ -0.47
RPAIN-203ENST00000381209 PAX4O43316 350 aa12.1□□□□□ -0.47
RPAIN-203ENST00000381209 FXYD2P54710 66 aa12.1□□□□□ -0.47
RPAIN-203ENST00000381209 IGHV1-58A0A0C4DH39 117 aa12.09□□□□□ -0.47
RPAIN-203ENST00000381209 ATP5G1P05496 136 aa12.09□□□□□ -0.47
RPAIN-203ENST00000381209 HERVK_113P63121 156 aa12.09□□□□□ -0.47
RPAIN-203ENST00000381209 LINC00469Q8N7U9 141 aa12.09□□□□□ -0.47
RPAIN-203ENST00000381209 A0A0J9YY99 117 aa12.08□□□□□ -0.48
RPAIN-203ENST00000381209 Q6ZVH6 145 aa12.08□□□□□ -0.48
RPAIN-203ENST00000381209 CELA1Q9UNI1 258 aa12.08□□□□□ -0.48
RPAIN-203ENST00000381209 IGHV3-30-3P0DP02 117 aa12.07□□□□□ -0.48
RPAIN-203ENST00000381209 PTTG1IPP53801 180 aa12.07□□□□□ -0.48
RPAIN-203ENST00000381209 LINC00242Q5T6M2 205 aa12.07□□□□□ -0.48
RPAIN-203ENST00000381209 SPANXB1Q9NS25 103 aaPredicted RBP12.07□□□□□ -0.48
RPAIN-203ENST00000381209 SMIM13P0DJ93 91 aa12.06□□□□□ -0.48
RPAIN-203ENST00000381209 GAGE6Q13070 117 aa12.06□□□□□ -0.48
RPAIN-203ENST00000381209 VSIG2Q96IQ7 327 aa12.06□□□□□ -0.48
RPAIN-203ENST00000381209 IGHV3-64A0A075B6Q5 118 aa12.06□□□□□ -0.48
RPAIN-203ENST00000381209 CHCHD5Q9BSY4 110 aa12.06□□□□□ -0.48
RPAIN-203ENST00000381209 CDKN2A-AS1Q9UH64 79 aa12.05□□□□□ -0.48
RPAIN-203ENST00000381209 TRAV26-1A0A087WT03 109 aa12.04□□□□□ -0.48
RPAIN-203ENST00000381209 TRAV13-1A0A0B4J241 112 aa12.04□□□□□ -0.48
RPAIN-203ENST00000381209 C9orf118A6NHY6 69 aa12.04□□□□□ -0.48
RPAIN-203ENST00000381209 K7EP13 123 aa12.04□□□□□ -0.48
RPAIN-203ENST00000381209 COX6A2Q02221 97 aa12.04□□□□□ -0.48
RPAIN-203ENST00000381209 SRSF9Q13242 221 aaKnown RBP eCLIP12.04□□□□□ -0.48
RPAIN-203ENST00000381209 TRAV8-3A0A0A6YYJ7 113 aa12.03□□□□□ -0.48
RPAIN-203ENST00000381209 G3V4G9 280 aa12.03□□□□□ -0.48
RPAIN-203ENST00000381209 SPINK8P0C7L1 97 aa12.03□□□□□ -0.48
RPAIN-203ENST00000381209 SAMD5Q5TGI4 173 aa12.03□□□□□ -0.48
RPAIN-203ENST00000381209 TMEM238LA0A1B0GVL6 79 aa12.01□□□□□ -0.49
RPAIN-203ENST00000381209 A0A1B0GWB2 263 aa12.01□□□□□ -0.49
RPAIN-203ENST00000381209 A6NJY4 79 aa12.01□□□□□ -0.49
RPAIN-203ENST00000381209 F5H768 121 aa12.01□□□□□ -0.49
RPAIN-203ENST00000381209 NHP2Q9NX24 153 aaKnown RBP12.01□□□□□ -0.49
RPAIN-203ENST00000381209 TRRAPQ9Y4A5 3859 aa12.01□□□□□ -0.49
RPAIN-203ENST00000381209 IGLV4-60A0A075B6I1 120 aa12.01□□□□□ -0.49
RPAIN-203ENST00000381209 IGLV5-39A0A0G2JS06 123 aa12.01□□□□□ -0.49
RPAIN-203ENST00000381209 A0A1B0GUV1 79 aa12.01□□□□□ -0.49
RPAIN-203ENST00000381209 VAMP3Q15836 100 aa12.01□□□□□ -0.49
RPAIN-203ENST00000381209 ZFAND6Q6FIF0 208 aa12.01□□□□□ -0.49
RPAIN-203ENST00000381209 SH2D6Q7Z4S9 175 aa12.01□□□□□ -0.49
RPAIN-203ENST00000381209 C10orf126Q8N4M7 172 aa12.01□□□□□ -0.49
RPAIN-203ENST00000381209 NDUFA12Q9UI09 145 aa12.01□□□□□ -0.49
RPAIN-203ENST00000381209 FBN1P35555 2871 aaKnown RBP12□□□□□ -0.49
RPAIN-203ENST00000381209 A0A0J9YXY3 114 aa12□□□□□ -0.49
RPAIN-203ENST00000381209 UBE2V1Q13404 147 aa12□□□□□ -0.49
RPAIN-203ENST00000381209 MRPL23Q16540 153 aaKnown RBP12□□□□□ -0.49
RPAIN-203ENST00000381209 C12orf74Q32Q52 190 aa12□□□□□ -0.49
RPAIN-203ENST00000381209 C11orf68Q9H3H3 251 aaKnown RBP12□□□□□ -0.49
RPAIN-203ENST00000381209 IGHV3-30P01768 117 aa11.99□□□□□ -0.49
RPAIN-203ENST00000381209 IGHV3-30-5P0DP03 117 aa11.99□□□□□ -0.49
RPAIN-203ENST00000381209 RAB37Q96AX2 223 aa11.99□□□□□ -0.49
RPAIN-203ENST00000381209 TMEM238C9JI98 176 aa11.98□□□□□ -0.49
RPAIN-203ENST00000381209 RETNQ9HD89 108 aa11.98□□□□□ -0.49
RPAIN-203ENST00000381209 SMIM1B2RUZ4 78 aa11.97□□□□□ -0.49
RPAIN-203ENST00000381209 ICOSQ9Y6W8 199 aa11.97□□□□□ -0.49
RPAIN-203ENST00000381209 A0A096LPF7 62 aa11.96□□□□□ -0.49
RPAIN-203ENST00000381209 TMEM262E9PQX1 116 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms