RNA–Protein interactions for RNA: ENST00000380877.7

GABPB1-203, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABPB1, Length 4,816 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-203ENST00000380877 IGLV1-51P01701 117 aa8.99□□□□□ -0.97
GABPB1-203ENST00000380877 RPL32P62910 135 aaKnown RBP8.99□□□□□ -0.97
GABPB1-203ENST00000380877 FAM110AQ9BQ89 295 aa8.99□□□□□ -0.97
GABPB1-203ENST00000380877 TINCRA0A1B0GVN0 87 aa8.98□□□□□ -0.97
GABPB1-203ENST00000380877 LINC00310P59036 64 aa8.98□□□□□ -0.97
GABPB1-203ENST00000380877 GTSF1LQ9H1H1 148 aa8.98□□□□□ -0.97
GABPB1-203ENST00000380877 CDKN2A-AS1Q9UH64 79 aa8.98□□□□□ -0.97
GABPB1-203ENST00000380877 SPAG11BQ08648 103 aa8.98□□□□□ -0.97
GABPB1-203ENST00000380877 PPDPFLQ8WWR9 84 aa8.98□□□□□ -0.97
GABPB1-203ENST00000380877 GAGE2AQ6NT46 116 aa8.98□□□□□ -0.97
GABPB1-203ENST00000380877 CARD19Q96LW7 228 aa8.98□□□□□ -0.97
GABPB1-203ENST00000380877 C16orf95Q9H693 158 aa8.98□□□□□ -0.97
GABPB1-203ENST00000380877 INAFM2P0DMQ5 153 aa8.97□□□□□ -0.97
GABPB1-203ENST00000380877 CRYBA4P53673 196 aa8.97□□□□□ -0.97
GABPB1-203ENST00000380877 TP73-AS1Q9UF72 201 aa8.97□□□□□ -0.97
GABPB1-203ENST00000380877 F8WEM9 126 aa8.97□□□□□ -0.97
GABPB1-203ENST00000380877 GAGE2BQ13066 116 aa8.97□□□□□ -0.97
GABPB1-203ENST00000380877 GAGE2EQ4V326 116 aa8.97□□□□□ -0.97
GABPB1-203ENST00000380877 GAGE2DQ9UEU5 116 aa8.97□□□□□ -0.97
GABPB1-203ENST00000380877 ZNF22P17026 224 aaPredicted RBP8.97□□□□□ -0.97
GABPB1-203ENST00000380877 TRBV6-8A0A0A6YYG3 113 aa8.96□□□□□ -0.97
GABPB1-203ENST00000380877 IGHV4-28A0A0C4DH34 117 aa8.96□□□□□ -0.97
GABPB1-203ENST00000380877 TAX1BP3O14907 124 aa8.96□□□□□ -0.97
GABPB1-203ENST00000380877 TSHBP01222 138 aa8.96□□□□□ -0.97
GABPB1-203ENST00000380877 KIR2DL5BQ8NHK3 375 aa8.96□□□□□ -0.97
GABPB1-203ENST00000380877 LINC00269Q8N2A0 174 aa8.96□□□□□ -0.97
GABPB1-203ENST00000380877 CFAP54Q96N23 3096 aa8.96□□□□□ -0.98
GABPB1-203ENST00000380877 IGKV2D-26A0A0A0MRZ7 120 aa8.96□□□□□ -0.98
GABPB1-203ENST00000380877 OXLD1Q5BKU9 147 aa8.96□□□□□ -0.98
GABPB1-203ENST00000380877 NDUFA1O15239 70 aa8.95□□□□□ -0.98
GABPB1-203ENST00000380877 CXCL5P42830 114 aa8.95□□□□□ -0.98
GABPB1-203ENST00000380877 MIR7-3HGQ8N6C7 128 aa8.95□□□□□ -0.98
GABPB1-203ENST00000380877 PIK3CD-AS1Q5SR53 167 aa8.95□□□□□ -0.98
GABPB1-203ENST00000380877 Q8N976 141 aa8.95□□□□□ -0.98
GABPB1-203ENST00000380877 DEFB131BA0A096LNP1 70 aa8.95□□□□□ -0.98
GABPB1-203ENST00000380877 URB1-AS1Q96HZ7 61 aa8.94□□□□□ -0.98
GABPB1-203ENST00000380877 PYGO1Q9Y3Y4 419 aa8.94□□□□□ -0.98
GABPB1-203ENST00000380877 REG3AQ06141 175 aa8.94□□□□□ -0.98
GABPB1-203ENST00000380877 H7C423 109 aa8.94□□□□□ -0.98
GABPB1-203ENST00000380877 SPATA25Q9BR10 227 aa8.93□□□□□ -0.98
GABPB1-203ENST00000380877 AGRNO00468 2067 aa8.93□□□□□ -0.98
GABPB1-203ENST00000380877 A0A0J9YXY3 114 aa8.93□□□□□ -0.98
GABPB1-203ENST00000380877 NTN5Q8WTR8 489 aaPredicted RBP8.93□□□□□ -0.98
GABPB1-203ENST00000380877 GAGE12HA6NDE8 117 aa8.93□□□□□ -0.98
GABPB1-203ENST00000380877 RPL18AQ02543 176 aaKnown RBP8.93□□□□□ -0.98
GABPB1-203ENST00000380877 NFE4Q86UQ8 179 aa8.93□□□□□ -0.98
GABPB1-203ENST00000380877 Q8N2B8 174 aa8.93□□□□□ -0.98
GABPB1-203ENST00000380877 LOC100131303A0A0U1RQF7 123 aa8.92□□□□□ -0.98
GABPB1-203ENST00000380877 TMEM223A0PJW6 202 aa8.92□□□□□ -0.98
GABPB1-203ENST00000380877 COL27A1Q8IZC6 1860 aaPredicted RBP8.92□□□□□ -0.98
GABPB1-203ENST00000380877 IGHV4-30-4P0DP06 118 aa8.92□□□□□ -0.98
GABPB1-203ENST00000380877 C1orf158Q8N1D5 194 aa8.92□□□□□ -0.98
GABPB1-203ENST00000380877 MAPKAPK5-AS1Q8N8E1 139 aa8.92□□□□□ -0.98
GABPB1-203ENST00000380877 ZFAND6Q6FIF0 208 aa8.91□□□□□ -0.98
GABPB1-203ENST00000380877 HIST1H4AP62805 103 aaKnown RBP8.91□□□□□ -0.98
GABPB1-203ENST00000380877 HELZ2Q9BYK8 2649 aaKnown RBP8.91□□□□□ -0.98
GABPB1-203ENST00000380877 CHCHD10Q8WYQ3 142 aaPredicted RBP8.91□□□□□ -0.98
GABPB1-203ENST00000380877 SZT2Q5T011 3432 aa8.91□□□□□ -0.98
GABPB1-203ENST00000380877 RBX1P62877 108 aa8.91□□□□□ -0.98
GABPB1-203ENST00000380877 MIAQ16674 131 aa8.91□□□□□ -0.98
GABPB1-203ENST00000380877 TIRAPP58753 221 aa8.9□□□□□ -0.98
GABPB1-203ENST00000380877 CFAP46Q8IYW2 2715 aa8.9□□□□□ -0.98
GABPB1-203ENST00000380877 KLK5Q9Y337 293 aaPredicted RBP8.9□□□□□ -0.98
GABPB1-203ENST00000380877 H0YGX0 51 aa8.9□□□□□ -0.99
GABPB1-203ENST00000380877 BAALC-AS2P0C853 105 aa8.9□□□□□ -0.99
GABPB1-203ENST00000380877 TM2D2Q9BX73 214 aa8.9□□□□□ -0.99
GABPB1-203ENST00000380877 UBE2BP63146 152 aa8.89□□□□□ -0.99
GABPB1-203ENST00000380877 ANAPC13Q9BS18 74 aa8.89□□□□□ -0.99
GABPB1-203ENST00000380877 TMEM126AQ9H061 195 aa8.89□□□□□ -0.99
GABPB1-203ENST00000380877 FLNAP21333 2647 aaKnown RBP8.89□□□□□ -0.99
GABPB1-203ENST00000380877 VPS13AQ96RL7 3174 aa8.89□□□□□ -0.99
GABPB1-203ENST00000380877 UBE2D4Q9Y2X8 147 aa8.88□□□□□ -0.99
GABPB1-203ENST00000380877 UBE2D3P61077 147 aa8.88□□□□□ -0.99
GABPB1-203ENST00000380877 UBE2D2P62837 147 aa8.88□□□□□ -0.99
GABPB1-203ENST00000380877 LINC01620Q4KN68 170 aa8.88□□□□□ -0.99
GABPB1-203ENST00000380877 ANKRD29Q8N6D5 301 aa8.88□□□□□ -0.99
GABPB1-203ENST00000380877 HIGD2BQ4VC39 106 aa8.88□□□□□ -0.99
GABPB1-203ENST00000380877 DSPP15924 2871 aaKnown RBP8.87□□□□□ -0.99
GABPB1-203ENST00000380877 ORMDL1Q9P0S3 153 aa8.87□□□□□ -0.99
GABPB1-203ENST00000380877 IGIPA6NJ69 53 aa8.87□□□□□ -0.99
GABPB1-203ENST00000380877 PRB2P02812 416 aaPredicted RBP8.87□□□□□ -0.99
GABPB1-203ENST00000380877 WFDC2Q14508 124 aa8.86□□□□□ -0.99
GABPB1-203ENST00000380877 RNASE8Q8TDE3 154 aaKnown RBP8.86□□□□□ -0.99
GABPB1-203ENST00000380877 NCR3O14931 201 aa8.86□□□□□ -0.99
GABPB1-203ENST00000380877 KPRPQ5T749 579 aaPredicted RBP8.86□□□□□ -0.99
GABPB1-203ENST00000380877 A8MZ25 164 aa8.85□□□□□ -0.99
GABPB1-203ENST00000380877 MRPS36P82909 103 aaKnown RBP8.85□□□□□ -0.99
GABPB1-203ENST00000380877 ETDCA0A1B0GVM5 59 aa8.85□□□□□ -0.99
GABPB1-203ENST00000380877 ITPR3Q14573 2671 aa8.85□□□□□ -0.99
GABPB1-203ENST00000380877 FSHBP01225 129 aa8.85□□□□□ -0.99
GABPB1-203ENST00000380877 DSCR8Q96T75 97 aa8.85□□□□□ -0.99
GABPB1-203ENST00000380877 SPANXCQ9NY87 97 aa8.85□□□□□ -0.99
GABPB1-203ENST00000380877 UBL5Q9BZL1 73 aa8.84□□□□□ -0.99
GABPB1-203ENST00000380877 TRAV10A0A0B4J240 114 aa8.84□□□□□ -0.99
GABPB1-203ENST00000380877 AKAP13Q12802 2813 aa8.84□□□□□ -0.99
GABPB1-203ENST00000380877 A0A096LNJ9 63 aa8.84□□□□□ -0.99
GABPB1-203ENST00000380877 UFSP1Q6NVU6 142 aa8.84□□□□□ -0.99
GABPB1-203ENST00000380877 C2orf91Q6ZV80 131 aa8.84□□□□□ -0.99
GABPB1-203ENST00000380877 IL17DQ8TAD2 202 aa8.84□□□□□ -0.99
GABPB1-203ENST00000380877 CLEC2BQ92478 149 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 79 ms