RNA–Protein interactions for RNA: ENST00000380833.8

CLCN4-202, Transcript of chloride voltage-gated channel 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN4, Length 6,750 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-202ENST00000380833 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.09□□□□□ -1.11
CLCN4-202ENST00000380833 IGLV9-49A0A0B4J1Y8 123 aa8.09□□□□□ -1.11
CLCN4-202ENST00000380833 THSD7BQ9C0I4 1608 aa8.08□□□□□ -1.12
CLCN4-202ENST00000380833 LINC01561Q8N1V8 128 aa8.08□□□□□ -1.12
CLCN4-202ENST00000380833 RLFQ13129 1914 aa8.08□□□□□ -1.12
CLCN4-202ENST00000380833 LINC00311Q8N616 119 aa8.08□□□□□ -1.12
CLCN4-202ENST00000380833 MGAMO43451 1857 aa8.08□□□□□ -1.12
CLCN4-202ENST00000380833 GPR179Q6PRD1 2367 aa8.08□□□□□ -1.12
CLCN4-202ENST00000380833 H3BUA1 57 aa8.08□□□□□ -1.12
CLCN4-202ENST00000380833 LINC01548A6NM66 108 aa8.08□□□□□ -1.12
CLCN4-202ENST00000380833 CD164L2Q6UWJ8 174 aa8.08□□□□□ -1.12
CLCN4-202ENST00000380833 FNDC1Q4ZHG4 1894 aaPredicted RBP8.07□□□□□ -1.12
CLCN4-202ENST00000380833 IGKV2-28A0A075B6P5 120 aa8.07□□□□□ -1.12
CLCN4-202ENST00000380833 IGKV2D-28P01615 120 aa8.07□□□□□ -1.12
CLCN4-202ENST00000380833 Q6ZTI0 123 aa8.07□□□□□ -1.12
CLCN4-202ENST00000380833 VWA8A3KMH1 1905 aa8.07□□□□□ -1.12
CLCN4-202ENST00000380833 X6R8D5 127 aa8.07□□□□□ -1.12
CLCN4-202ENST00000380833 WFDC13Q8IUB5 93 aa8.07□□□□□ -1.12
CLCN4-202ENST00000380833 C3orf84H3BNL1 204 aa8.06□□□□□ -1.12
CLCN4-202ENST00000380833 C10orf99Q6UWK7 81 aa8.06□□□□□ -1.12
CLCN4-202ENST00000380833 XAGE1AQ9HD64 81 aa8.06□□□□□ -1.12
CLCN4-202ENST00000380833 PTPRQQ9UMZ3 2332 aa8.06□□□□□ -1.12
CLCN4-202ENST00000380833 PRM2P04554 102 aa8.06□□□□□ -1.12
CLCN4-202ENST00000380833 MAP6D1Q9H9H5 199 aa8.06□□□□□ -1.12
CLCN4-202ENST00000380833 PLA2G2AP14555 144 aa8.06□□□□□ -1.12
CLCN4-202ENST00000380833 Q8N3U1 123 aa8.06□□□□□ -1.12
CLCN4-202ENST00000380833 ODF3Q96PU9 254 aa8.06□□□□□ -1.12
CLCN4-202ENST00000380833 KTN1-AS1Q86SY8 53 aa8.06□□□□□ -1.12
CLCN4-202ENST00000380833 LINC00310P59036 64 aa8.05□□□□□ -1.12
CLCN4-202ENST00000380833 BCE1O60756 84 aa8.05□□□□□ -1.12
CLCN4-202ENST00000380833 C11orf53Q8IXP5 236 aa8.05□□□□□ -1.12
CLCN4-202ENST00000380833 EIF4EBP1Q13541 118 aaPredicted RBP8.05□□□□□ -1.12
CLCN4-202ENST00000380833 A0A0J9YX75 114 aa8.05□□□□□ -1.12
CLCN4-202ENST00000380833 RSPO1Q2MKA7 263 aaPredicted RBP8.05□□□□□ -1.12
CLCN4-202ENST00000380833 C7orf33Q8WU49 177 aa8.05□□□□□ -1.12
CLCN4-202ENST00000380833 K7EIM0 57 aa8.05□□□□□ -1.12
CLCN4-202ENST00000380833 REG3AQ06141 175 aa8.05□□□□□ -1.12
CLCN4-202ENST00000380833 LINC00208Q96KT6 92 aa8.05□□□□□ -1.12
CLCN4-202ENST00000380833 Q8N7P7 452 aa8.05□□□□□ -1.12
CLCN4-202ENST00000380833 FAM19A4Q96LR4 140 aa8.05□□□□□ -1.12
CLCN4-202ENST00000380833 RPL37AP8A6NKH3 93 aa8.04□□□□□ -1.12
CLCN4-202ENST00000380833 WNK1Q9H4A3 2382 aa8.04□□□□□ -1.12
CLCN4-202ENST00000380833 POM121L12Q8N7R1 296 aa8.04□□□□□ -1.12
CLCN4-202ENST00000380833 SHANK1Q9Y566 2161 aa8.04□□□□□ -1.12
CLCN4-202ENST00000380833 HCG22E2RYF7 251 aa8.04□□□□□ -1.12
CLCN4-202ENST00000380833 I3L2K1 104 aa8.04□□□□□ -1.12
CLCN4-202ENST00000380833 Q6ZS46 218 aa8.04□□□□□ -1.12
CLCN4-202ENST00000380833 RPL28P46779 137 aaKnown RBP8.04□□□□□ -1.12
CLCN4-202ENST00000380833 LINC00322Q6ZN03 302 aaPredicted RBP8.04□□□□□ -1.12
CLCN4-202ENST00000380833 IBA57-AS1B1ANH7 110 aa8.03□□□□□ -1.12
CLCN4-202ENST00000380833 LINC00336Q6ZUF6 198 aa8.03□□□□□ -1.12
CLCN4-202ENST00000380833 ZNF73O43830 326 aaPredicted RBP8.03□□□□□ -1.12
CLCN4-202ENST00000380833 PRO0255Q9UI72 69 aa8.03□□□□□ -1.12
CLCN4-202ENST00000380833 LCA10Q71F78 164 aa8.03□□□□□ -1.12
CLCN4-202ENST00000380833 CACNA1HO95180 2353 aa8.03□□□□□ -1.12
CLCN4-202ENST00000380833 ZFHX2Q9C0A1 2572 aaPredicted RBP8.03□□□□□ -1.12
CLCN4-202ENST00000380833 E7EUB6 86 aa8.03□□□□□ -1.12
CLCN4-202ENST00000380833 ZNF843Q8N446 348 aa8.03□□□□□ -1.12
CLCN4-202ENST00000380833 KAAG1Q9UBP8 84 aa8.03□□□□□ -1.12
CLCN4-202ENST00000380833 SMIM11BQ8TCY0 68 aa8.02□□□□□ -1.13
CLCN4-202ENST00000380833 IGLV2-11P01706 119 aa8.02□□□□□ -1.13
CLCN4-202ENST00000380833 IGLV11-55A0A075B6I3 123 aa8.02□□□□□ -1.13
CLCN4-202ENST00000380833 IGLV3-1P01715 115 aa8.02□□□□□ -1.13
CLCN4-202ENST00000380833 Q6ZQY7 126 aa8.02□□□□□ -1.13
CLCN4-202ENST00000380833 hDV103S1A0JD37 113 aa8.02□□□□□ -1.13
CLCN4-202ENST00000380833 TRBV6-5A0A0K0K1A5 114 aa8.02□□□□□ -1.13
CLCN4-202ENST00000380833 C18orf65Q6ZTR6 163 aa8.02□□□□□ -1.13
CLCN4-202ENST00000380833 SBSPONQ8IVN8 264 aa8.01□□□□□ -1.13
CLCN4-202ENST00000380833 FAM208BQ5VWN6 2430 aa8.01□□□□□ -1.13
CLCN4-202ENST00000380833 PLXNA3P51805 1871 aa8.01□□□□□ -1.13
CLCN4-202ENST00000380833 SPINT4Q6UDR6 99 aa8.01□□□□□ -1.13
CLCN4-202ENST00000380833 MALRD1Q5VYJ5 2156 aa8□□□□□ -1.13
CLCN4-202ENST00000380833 CHCHD10Q8WYQ3 142 aaPredicted RBP8□□□□□ -1.13
CLCN4-202ENST00000380833 IGLV4-3A0A075B6K6 122 aa8□□□□□ -1.13
CLCN4-202ENST00000380833 A0A1W2PNU3 283 aaPredicted RBP8□□□□□ -1.13
CLCN4-202ENST00000380833 NTM-AS1Q6ZSK4 140 aa8□□□□□ -1.13
CLCN4-202ENST00000380833 ARHGAP21Q5T5U3 1957 aa8□□□□□ -1.13
CLCN4-202ENST00000380833 RNASE3P12724 160 aaKnown RBP8□□□□□ -1.13
CLCN4-202ENST00000380833 C6orf99Q4VX62 202 aa8□□□□□ -1.13
CLCN4-202ENST00000380833 PROK1P58294 105 aa7.99□□□□□ -1.13
CLCN4-202ENST00000380833 C14orf177Q52M58 125 aa7.99□□□□□ -1.13
CLCN4-202ENST00000380833 C7orf65Q6ZTY9 151 aa7.99□□□□□ -1.13
CLCN4-202ENST00000380833 PLXNA4Q9HCM2 1894 aa7.99□□□□□ -1.13
CLCN4-202ENST00000380833 CDKN2A-AS1Q9UH64 79 aa7.99□□□□□ -1.13
CLCN4-202ENST00000380833 Q6ZVQ6 151 aa7.99□□□□□ -1.13
CLCN4-202ENST00000380833 RNF185Q96GF1 192 aa7.99□□□□□ -1.13
CLCN4-202ENST00000380833 ODF3L1Q8IXM7 274 aa7.98□□□□□ -1.13
CLCN4-202ENST00000380833 TANC2Q9HCD6 1990 aa7.98□□□□□ -1.13
CLCN4-202ENST00000380833 KIF26AQ9ULI4 1882 aaPredicted RBP7.98□□□□□ -1.13
CLCN4-202ENST00000380833 BBC3Q96PG8 261 aaPredicted RBP7.97□□□□□ -1.13
CLCN4-202ENST00000380833 LOC100131303A0A0U1RQF7 123 aa7.97□□□□□ -1.13
CLCN4-202ENST00000380833 Q8NA96 180 aa7.97□□□□□ -1.13
CLCN4-202ENST00000380833 LINC00846Q9NV44 126 aa7.97□□□□□ -1.13
CLCN4-202ENST00000380833 PRO3102Q9H379 93 aa7.96□□□□□ -1.13
CLCN4-202ENST00000380833 ZFAND2AQ8N6M9 145 aa7.96□□□□□ -1.14
CLCN4-202ENST00000380833 OTOGLQ3ZCN5 2332 aa7.96□□□□□ -1.14
CLCN4-202ENST00000380833 A6NDX4 124 aa7.95□□□□□ -1.14
CLCN4-202ENST00000380833 CIRBP-AS1Q8TBR5 109 aa7.95□□□□□ -1.14
CLCN4-202ENST00000380833 ZNF80P51504 273 aaPredicted RBP7.95□□□□□ -1.14
CLCN4-202ENST00000380833 LINC00467Q9BRT7 94 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms