RNA–Protein interactions for RNA: ENST00000379883.2

DDX58-202, Transcript of DExD/H-box helicase 58, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX58, Length 4,353 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX58-202ENST00000379883 LINC00336Q6ZUF6 198 aa5.22□□□□□ -1.57
DDX58-202ENST00000379883 HILS1P60008 231 aa5.21□□□□□ -1.57
DDX58-202ENST00000379883 HAMPP81172 84 aa5.21□□□□□ -1.57
DDX58-202ENST00000379883 TMEM89A2RUT3 159 aa5.21□□□□□ -1.58
DDX58-202ENST00000379883 NBL1P41271 181 aa5.21□□□□□ -1.58
DDX58-202ENST00000379883 KLKP1Q107X0 134 aa5.21□□□□□ -1.58
DDX58-202ENST00000379883 C11orf44Q8N8P7 122 aa5.21□□□□□ -1.58
DDX58-202ENST00000379883 DYNLRB2Q8TF09 96 aa5.21□□□□□ -1.58
DDX58-202ENST00000379883 SZT2Q5T011 3432 aa5.21□□□□□ -1.58
DDX58-202ENST00000379883 MUC4Q99102 2169 aa5.21□□□□□ -1.58
DDX58-202ENST00000379883 SEC61GP60059 68 aa5.21□□□□□ -1.58
DDX58-202ENST00000379883 SLPIP03973 132 aa5.2□□□□□ -1.58
DDX58-202ENST00000379883 WFDC11Q8NEX6 87 aa5.2□□□□□ -1.58
DDX58-202ENST00000379883 CCL18P55774 89 aa5.2□□□□□ -1.58
DDX58-202ENST00000379883 C6orf226Q5I0X4 101 aa5.2□□□□□ -1.58
DDX58-202ENST00000379883 FAM19A1Q7Z5A9 133 aa5.2□□□□□ -1.58
DDX58-202ENST00000379883 F8WEM9 126 aa5.2□□□□□ -1.58
DDX58-202ENST00000379883 CCL21O00585 134 aa5.2□□□□□ -1.58
DDX58-202ENST00000379883 IGLV1-40P01703 118 aa5.2□□□□□ -1.58
DDX58-202ENST00000379883 C11orf71Q6IPW1 123 aa5.2□□□□□ -1.58
DDX58-202ENST00000379883 CDC42SE2Q9NRR3 84 aa5.2□□□□□ -1.58
DDX58-202ENST00000379883 TPRP12270 2363 aaKnown RBP5.2□□□□□ -1.58
DDX58-202ENST00000379883 PKDREJQ9NTG1 2253 aa5.2□□□□□ -1.58
DDX58-202ENST00000379883 TRBV6-4A0A1B0GX49 114 aa5.2□□□□□ -1.58
DDX58-202ENST00000379883 H3BUX3 64 aa5.2□□□□□ -1.58
DDX58-202ENST00000379883 H7BZZ5 65 aa5.2□□□□□ -1.58
DDX58-202ENST00000379883 K7EQD1 137 aa5.2□□□□□ -1.58
DDX58-202ENST00000379883 WFDC9Q8NEX5 89 aa5.2□□□□□ -1.58
DDX58-202ENST00000379883 LYPD5Q6UWN5 251 aa5.19□□□□□ -1.58
DDX58-202ENST00000379883 CEP290O15078 2479 aa5.19□□□□□ -1.58
DDX58-202ENST00000379883 TRBV7-6A0A0J9YX20 115 aa5.19□□□□□ -1.58
DDX58-202ENST00000379883 EPM2AB3EWF7 344 aa5.19□□□□□ -1.58
DDX58-202ENST00000379883 DEFB131AP59861 70 aa5.19□□□□□ -1.58
DDX58-202ENST00000379883 RANBP2P49792 3224 aaKnown RBP5.19□□□□□ -1.58
DDX58-202ENST00000379883 ROS1P08922 2347 aa5.19□□□□□ -1.58
DDX58-202ENST00000379883 NACAE9PAV3 2078 aa5.19□□□□□ -1.58
DDX58-202ENST00000379883 IGKV2-28A0A075B6P5 120 aa5.19□□□□□ -1.58
DDX58-202ENST00000379883 IGKV2D-28P01615 120 aa5.19□□□□□ -1.58
DDX58-202ENST00000379883 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP5.19□□□□□ -1.58
DDX58-202ENST00000379883 Q8N814 137 aa5.19□□□□□ -1.58
DDX58-202ENST00000379883 A0A1W2PRX2 142 aa5.18□□□□□ -1.58
DDX58-202ENST00000379883 TRGV1A0A0A0MS02 117 aa5.18□□□□□ -1.58
DDX58-202ENST00000379883 A6NDX4 124 aa5.18□□□□□ -1.58
DDX58-202ENST00000379883 Q6ZSN1 163 aa5.18□□□□□ -1.58
DDX58-202ENST00000379883 IGKV3OR2-268A0A0C4DH90 116 aa5.18□□□□□ -1.58
DDX58-202ENST00000379883 MIFP14174 115 aa5.18□□□□□ -1.58
DDX58-202ENST00000379883 CXCL6P80162 114 aa5.18□□□□□ -1.58
DDX58-202ENST00000379883 ZNF561-AS1K7EIQ3 104 aa5.17□□□□□ -1.58
DDX58-202ENST00000379883 LINC00167Q96N53 147 aa5.17□□□□□ -1.58
DDX58-202ENST00000379883 SNURFQ9Y675 71 aa5.17□□□□□ -1.58
DDX58-202ENST00000379883 ABCA4P78363 2273 aa5.17□□□□□ -1.58
DDX58-202ENST00000379883 BRD3OSQ6XYD6 125 aa5.17□□□□□ -1.58
DDX58-202ENST00000379883 LINC00482Q8N8I6 264 aa5.17□□□□□ -1.58
DDX58-202ENST00000379883 BPESC1Q9GZL8 116 aa5.17□□□□□ -1.58
DDX58-202ENST00000379883 CEP250Q9BV73 2442 aa5.17□□□□□ -1.58
DDX58-202ENST00000379883 LY6G6DO95868 133 aa5.16□□□□□ -1.58
DDX58-202ENST00000379883 LMO4P61968 165 aa5.16□□□□□ -1.58
DDX58-202ENST00000379883 C9orf129Q5T035 196 aaKnown RBP5.16□□□□□ -1.58
DDX58-202ENST00000379883 A0A0U1RQV1 116 aa5.16□□□□□ -1.58
DDX58-202ENST00000379883 POLEQ07864 2286 aa5.16□□□□□ -1.58
DDX58-202ENST00000379883 LOC110117498A0A087WWA1 95 aa5.16□□□□□ -1.58
DDX58-202ENST00000379883 RMI2Q96E14 147 aa5.16□□□□□ -1.58
DDX58-202ENST00000379883 LINC01547P58512 204 aaPredicted RBP5.15□□□□□ -1.58
DDX58-202ENST00000379883 SS18Q15532 418 aa5.15□□□□□ -1.58
DDX58-202ENST00000379883 ERC2-IT1O76042 136 aa5.15□□□□□ -1.59
DDX58-202ENST00000379883 Q8NA96 180 aa5.15□□□□□ -1.59
DDX58-202ENST00000379883 RP1L1Q8IWN7 2480 aaPredicted RBP5.14□□□□□ -1.59
DDX58-202ENST00000379883 GRNP28799 593 aaKnown RBP5.14□□□□□ -1.59
DDX58-202ENST00000379883 USP34Q70CQ2 3546 aa5.14□□□□□ -1.59
DDX58-202ENST00000379883 FUSP35637 526 aaKnown RBP eCLIP5.14□□□□□ -1.59
DDX58-202ENST00000379883 A0A087WZ39 114 aa5.13□□□□□ -1.59
DDX58-202ENST00000379883 EDN2P20800 178 aa5.13□□□□□ -1.59
DDX58-202ENST00000379883 NTM-AS1Q6ZSK4 140 aa5.13□□□□□ -1.59
DDX58-202ENST00000379883 STHQ8IWL8 128 aa5.13□□□□□ -1.59
DDX58-202ENST00000379883 TRGV2A0A075B6R0 118 aa5.13□□□□□ -1.59
DDX58-202ENST00000379883 CFHR3Q02985 330 aa5.13□□□□□ -1.59
DDX58-202ENST00000379883 NREPQ16612 68 aa5.13□□□□□ -1.59
DDX58-202ENST00000379883 Q6ZQT0 140 aa5.13□□□□□ -1.59
DDX58-202ENST00000379883 Q6ZVQ6 151 aa5.13□□□□□ -1.59
DDX58-202ENST00000379883 COX17Q14061 63 aa5.13□□□□□ -1.59
DDX58-202ENST00000379883 C11orf72Q8NBR9 251 aa5.13□□□□□ -1.59
DDX58-202ENST00000379883 CDH23Q9H251 3354 aa5.12□□□□□ -1.59
DDX58-202ENST00000379883 A8MTW9 85 aa5.12□□□□□ -1.59
DDX58-202ENST00000379883 MPLKIPQ8TAP9 179 aa5.12□□□□□ -1.59
DDX58-202ENST00000379883 Q9UF83 564 aa5.12□□□□□ -1.59
DDX58-202ENST00000379883 TRGV4A0A0C4DH28 118 aa5.12□□□□□ -1.59
DDX58-202ENST00000379883 Q8N3U1 123 aa5.12□□□□□ -1.59
DDX58-202ENST00000379883 FP248Q71RG6 208 aaPredicted RBP5.12□□□□□ -1.59
DDX58-202ENST00000379883 TMEM254Q8TBM7 123 aa5.12□□□□□ -1.59
DDX58-202ENST00000379883 Q96MF0 132 aa5.12□□□□□ -1.59
DDX58-202ENST00000379883 TECTAO75443 2155 aa5.12□□□□□ -1.59
DDX58-202ENST00000379883 ESRGQ1W209 222 aa5.11□□□□□ -1.59
DDX58-202ENST00000379883 KHDC1LQ5JSQ8 128 aa5.11□□□□□ -1.59
DDX58-202ENST00000379883 UBE2E2Q96LR5 201 aa5.11□□□□□ -1.59
DDX58-202ENST00000379883 Q8IZM0 81 aa5.11□□□□□ -1.59
DDX58-202ENST00000379883 LAMA1P25391 3075 aa5.11□□□□□ -1.59
DDX58-202ENST00000379883 C6orf223Q8N319 242 aa5.11□□□□□ -1.59
DDX58-202ENST00000379883 MUC7Q8TAX7 377 aa5.11□□□□□ -1.59
DDX58-202ENST00000379883 TRAV10A0A0B4J240 114 aa5.11□□□□□ -1.59
DDX58-202ENST00000379883 PLAC8L1A1L4L8 177 aa5.11□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms