RNA–Protein interactions for RNA: ENST00000379433.5

NEDD9-201, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 1 (best) BASIC

Gene NEDD9, Length 3,341 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-201ENST00000379433 C4orf3Q8WVX3 66 aa7.96□□□□□ -1.14
NEDD9-201ENST00000379433 RBMY1A1P0DJD3 496 aaKnown RBP7.96□□□□□ -1.14
NEDD9-201ENST00000379433 RBMY1CP0DJD4 496 aa7.96□□□□□ -1.14
NEDD9-201ENST00000379433 HILS1P60008 231 aa7.96□□□□□ -1.14
NEDD9-201ENST00000379433 RBMY1FQ15415 496 aaKnown RBP7.96□□□□□ -1.14
NEDD9-201ENST00000379433 NFE4Q86UQ8 179 aa7.96□□□□□ -1.14
NEDD9-201ENST00000379433 FAM19A4Q96LR4 140 aa7.96□□□□□ -1.14
NEDD9-201ENST00000379433 DPH3P1Q9H4G8 78 aa7.96□□□□□ -1.14
NEDD9-201ENST00000379433 IGHV1OR15-1A0A075B7D0 117 aa7.95□□□□□ -1.14
NEDD9-201ENST00000379433 A8MWV9 139 aa7.95□□□□□ -1.14
NEDD9-201ENST00000379433 IGHV3-53P01767 116 aa7.95□□□□□ -1.14
NEDD9-201ENST00000379433 LINC00526Q96FQ7 95 aa7.95□□□□□ -1.14
NEDD9-201ENST00000379433 LENEPQ9Y5L5 61 aa7.95□□□□□ -1.14
NEDD9-201ENST00000379433 COL6A5A8TX70 2615 aa7.95□□□□□ -1.14
NEDD9-201ENST00000379433 KLLNB2CW77 178 aa7.95□□□□□ -1.14
NEDD9-201ENST00000379433 SUMO2P61956 95 aaKnown RBP7.95□□□□□ -1.14
NEDD9-201ENST00000379433 DEFB114Q30KQ6 69 aa7.94□□□□□ -1.14
NEDD9-201ENST00000379433 NRACQ8N912 160 aa7.94□□□□□ -1.14
NEDD9-201ENST00000379433 CNFNQ9BYD5 112 aa7.94□□□□□ -1.14
NEDD9-201ENST00000379433 U3KQK5 164 aa7.94□□□□□ -1.14
NEDD9-201ENST00000379433 LAGE3Q14657 143 aa7.94□□□□□ -1.14
NEDD9-201ENST00000379433 MYOZ3Q8TDC0 251 aa7.94□□□□□ -1.14
NEDD9-201ENST00000379433 MAP6D1Q9H9H5 199 aa7.94□□□□□ -1.14
NEDD9-201ENST00000379433 NXT2Q9NPJ8 142 aaKnown RBP7.94□□□□□ -1.14
NEDD9-201ENST00000379433 ZNF580Q9UK33 172 aa7.94□□□□□ -1.14
NEDD9-201ENST00000379433 RBMY1BA6NDE4 496 aaKnown RBP7.93□□□□□ -1.14
NEDD9-201ENST00000379433 RBMY1EA6NEQ0 496 aaKnown RBP7.93□□□□□ -1.14
NEDD9-201ENST00000379433 RBMY1DP0C7P1 496 aaKnown RBP7.93□□□□□ -1.14
NEDD9-201ENST00000379433 RPL39P62891 51 aaKnown RBP7.93□□□□□ -1.14
NEDD9-201ENST00000379433 C15orf53Q8NAA6 179 aa7.93□□□□□ -1.14
NEDD9-201ENST00000379433 K7EMI3 77 aa7.93□□□□□ -1.14
NEDD9-201ENST00000379433 LGALS9O00182 355 aa7.93□□□□□ -1.14
NEDD9-201ENST00000379433 PAX4O43316 350 aa7.93□□□□□ -1.14
NEDD9-201ENST00000379433 PRIMA1Q86XR5 153 aa7.93□□□□□ -1.14
NEDD9-201ENST00000379433 ANK3Q12955 4377 aaKnown RBP7.93□□□□□ -1.14
NEDD9-201ENST00000379433 H3BMM0 161 aa7.93□□□□□ -1.14
NEDD9-201ENST00000379433 TMEM258P61165 79 aa7.93□□□□□ -1.14
NEDD9-201ENST00000379433 DAZ2Q13117 558 aaKnown RBP7.93□□□□□ -1.14
NEDD9-201ENST00000379433 SUMO4Q6EEV6 95 aa7.93□□□□□ -1.14
NEDD9-201ENST00000379433 DAZ4Q86SG3 579 aaKnown RBP7.93□□□□□ -1.14
NEDD9-201ENST00000379433 PCP2Q8IVA1 136 aa7.93□□□□□ -1.14
NEDD9-201ENST00000379433 SCGB3A1Q96QR1 104 aa7.93□□□□□ -1.14
NEDD9-201ENST00000379433 SCRT2Q9NQ03 307 aa7.93□□□□□ -1.14
NEDD9-201ENST00000379433 DAZ3Q9NR90 486 aaKnown RBP7.93□□□□□ -1.14
NEDD9-201ENST00000379433 SMIM2Q9BVW6 85 aa7.92□□□□□ -1.14
NEDD9-201ENST00000379433 IGHV3-38A0A0C4DH36 116 aa7.92□□□□□ -1.14
NEDD9-201ENST00000379433 hADV29S1A0JD25 119 aa7.92□□□□□ -1.14
NEDD9-201ENST00000379433 FCER1GP30273 86 aa7.92□□□□□ -1.14
NEDD9-201ENST00000379433 Q8N8P6 123 aa7.92□□□□□ -1.14
NEDD9-201ENST00000379433 OPRPNQ99935 248 aaPredicted RBP7.91□□□□□ -1.14
NEDD9-201ENST00000379433 MRPL35Q9NZE8 188 aaKnown RBP7.91□□□□□ -1.14
NEDD9-201ENST00000379433 HHLA3Q9XRX5 114 aa7.91□□□□□ -1.14
NEDD9-201ENST00000379433 CRXO43186 299 aaPredicted RBP7.91□□□□□ -1.14
NEDD9-201ENST00000379433 RNASE13Q5GAN3 156 aaKnown RBP7.91□□□□□ -1.14
NEDD9-201ENST00000379433 BAHCC1Q9P281 2608 aa7.91□□□□□ -1.14
NEDD9-201ENST00000379433 SDHAF1A6NFY7 115 aa7.91□□□□□ -1.14
NEDD9-201ENST00000379433 LINC01545Q5VT33 79 aa7.91□□□□□ -1.14
NEDD9-201ENST00000379433 C2orf91Q6ZV80 131 aa7.91□□□□□ -1.14
NEDD9-201ENST00000379433 PHLDA1Q8WV24 401 aaPredicted RBP7.91□□□□□ -1.14
NEDD9-201ENST00000379433 FBN1P35555 2871 aaKnown RBP7.9□□□□□ -1.14
NEDD9-201ENST00000379433 ODF3L2Q3SX64 289 aa7.9□□□□□ -1.14
NEDD9-201ENST00000379433 Q8N2B8 174 aa7.9□□□□□ -1.14
NEDD9-201ENST00000379433 NBEAL1Q6ZS30 2694 aa7.9□□□□□ -1.14
NEDD9-201ENST00000379433 K7ERJ3 54 aa7.9□□□□□ -1.14
NEDD9-201ENST00000379433 C2orf66Q6UXQ4 117 aa7.9□□□□□ -1.14
NEDD9-201ENST00000379433 HLA-DRB4P13762 266 aa7.89□□□□□ -1.15
NEDD9-201ENST00000379433 HLA-DRB4X5D2U9 266 aa7.89□□□□□ -1.15
NEDD9-201ENST00000379433 IGHV3-64A0A075B6Q5 118 aa7.89□□□□□ -1.15
NEDD9-201ENST00000379433 COX8AP10176 69 aa7.89□□□□□ -1.15
NEDD9-201ENST00000379433 PRO0461Q9UI25 63 aa7.89□□□□□ -1.15
NEDD9-201ENST00000379433 IGKV2D-26A0A0A0MRZ7 120 aa7.88□□□□□ -1.15
NEDD9-201ENST00000379433 TRGV1A0A0A0MS02 117 aa7.88□□□□□ -1.15
NEDD9-201ENST00000379433 M0R2P5 195 aa7.88□□□□□ -1.15
NEDD9-201ENST00000379433 SPATA3Q8NHX4 192 aa7.88□□□□□ -1.15
NEDD9-201ENST00000379433 NHP2Q9NX24 153 aaKnown RBP7.88□□□□□ -1.15
NEDD9-201ENST00000379433 INAFM2P0DMQ5 153 aa7.88□□□□□ -1.15
NEDD9-201ENST00000379433 HERVK_113P61574 105 aa7.88□□□□□ -1.15
NEDD9-201ENST00000379433 CEMP1Q6PRD7 247 aaPredicted RBP7.88□□□□□ -1.15
NEDD9-201ENST00000379433 TEN1Q86WV5 123 aa7.88□□□□□ -1.15
NEDD9-201ENST00000379433 CEND1Q8N111 149 aa7.88□□□□□ -1.15
NEDD9-201ENST00000379433 IGLV2-18A0A075B6J9 118 aa7.88□□□□□ -1.15
NEDD9-201ENST00000379433 RNASE1P07998 156 aaKnown RBP7.88□□□□□ -1.15
NEDD9-201ENST00000379433 TRAV2A0A0B4J234 112 aa7.87□□□□□ -1.15
NEDD9-201ENST00000379433 RRN3P1Q2M238 152 aa7.87□□□□□ -1.15
NEDD9-201ENST00000379433 MORN3Q6PF18 240 aaPredicted RBP7.87□□□□□ -1.15
NEDD9-201ENST00000379433 IGKCP01834 107 aa7.86□□□□□ -1.15
NEDD9-201ENST00000379433 PKD1L1Q8TDX9 2849 aa7.86□□□□□ -1.15
NEDD9-201ENST00000379433 TRGV11A0A075B6L2 103 aa7.86□□□□□ -1.15
NEDD9-201ENST00000379433 IGHV4-4A0A075B6R2 117 aa7.86□□□□□ -1.15
NEDD9-201ENST00000379433 LINC00315P59091 139 aa7.86□□□□□ -1.15
NEDD9-201ENST00000379433 C12orf74Q32Q52 190 aa7.86□□□□□ -1.15
NEDD9-201ENST00000379433 A0A0A0MQY5 61 aa7.85□□□□□ -1.15
NEDD9-201ENST00000379433 E9PLD3 99 aa7.85□□□□□ -1.15
NEDD9-201ENST00000379433 KRTAP10-3P60369 221 aa7.85□□□□□ -1.15
NEDD9-201ENST00000379433 Q6ZSN1 163 aa7.85□□□□□ -1.15
NEDD9-201ENST00000379433 TCL1BO95988 128 aa7.85□□□□□ -1.15
NEDD9-201ENST00000379433 INSP01308 110 aa7.85□□□□□ -1.15
NEDD9-201ENST00000379433 LGALS9BQ3B8N2 356 aa7.85□□□□□ -1.15
NEDD9-201ENST00000379433 LGALS9CQ6DKI2 356 aa7.85□□□□□ -1.15
NEDD9-201ENST00000379433 IGLL5B9A064 214 aa7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 82.7 ms