RNA–Protein interactions for RNA: ENST00000379013.6

UPK1A-202, Transcript of uroplakin 1A, humanhuman

TSL 1 (best) BASIC

Gene UPK1A, Length 1,016 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1A-202ENST00000379013 SERF1AO75920 110 aa9.46□□□□□ -0.9
UPK1A-202ENST00000379013 GAGE6Q13070 117 aa9.46□□□□□ -0.9
UPK1A-202ENST00000379013 COA6Q5JTJ3 125 aaKnown RBP9.46□□□□□ -0.9
UPK1A-202ENST00000379013 TOMM6Q96B49 74 aa9.46□□□□□ -0.9
UPK1A-202ENST00000379013 PYGO1Q9Y3Y4 419 aa9.46□□□□□ -0.9
UPK1A-202ENST00000379013 LRP1BQ9NZR2 4599 aa9.46□□□□□ -0.9
UPK1A-202ENST00000379013 ATP5LO75964 103 aa9.45□□□□□ -0.9
UPK1A-202ENST00000379013 CRPP02741 224 aa9.45□□□□□ -0.9
UPK1A-202ENST00000379013 DEFB104AQ8WTQ1 72 aa9.45□□□□□ -0.9
UPK1A-202ENST00000379013 TMEM141Q96I45 108 aa9.45□□□□□ -0.9
UPK1A-202ENST00000379013 TIMM17AQ99595 171 aa9.45□□□□□ -0.9
UPK1A-202ENST00000379013 M0R2N4 97 aa9.44□□□□□ -0.9
UPK1A-202ENST00000379013 ANGP03950 147 aaKnown RBP9.44□□□□□ -0.9
UPK1A-202ENST00000379013 NDUFA6P56556 154 aa9.44□□□□□ -0.9
UPK1A-202ENST00000379013 RBX1P62877 108 aa9.44□□□□□ -0.9
UPK1A-202ENST00000379013 MPV17L2Q567V2 206 aa9.44□□□□□ -0.9
UPK1A-202ENST00000379013 ERASQ7Z444 233 aa9.44□□□□□ -0.9
UPK1A-202ENST00000379013 SCGB3A1Q96QR1 104 aa9.44□□□□□ -0.9
UPK1A-202ENST00000379013 UBE2D4Q9Y2X8 147 aa9.44□□□□□ -0.9
UPK1A-202ENST00000379013 RYR1P21817 5038 aa9.43□□□□□ -0.9
UPK1A-202ENST00000379013 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.43□□□□□ -0.9
UPK1A-202ENST00000379013 RTL8CO15255 209 aa9.43□□□□□ -0.9
UPK1A-202ENST00000379013 RPL39P62891 51 aaKnown RBP9.43□□□□□ -0.9
UPK1A-202ENST00000379013 MRPS36P82909 103 aaKnown RBP9.43□□□□□ -0.9
UPK1A-202ENST00000379013 PACRGQ96M98 296 aaPredicted RBP9.43□□□□□ -0.9
UPK1A-202ENST00000379013 C2orf88Q9BSF0 95 aa9.43□□□□□ -0.9
UPK1A-202ENST00000379013 HSPB8Q9UJY1 196 aa9.43□□□□□ -0.9
UPK1A-202ENST00000379013 TRAV8-3A0A0A6YYJ7 113 aa9.42□□□□□ -0.9
UPK1A-202ENST00000379013 CCL25O15444 150 aa9.42□□□□□ -0.9
UPK1A-202ENST00000379013 IGHV3-30P01768 117 aa9.42□□□□□ -0.9
UPK1A-202ENST00000379013 IGHV3-33P01772 117 aa9.42□□□□□ -0.9
UPK1A-202ENST00000379013 IGHV3-30-3P0DP02 117 aa9.42□□□□□ -0.9
UPK1A-202ENST00000379013 IGHV3-30-5P0DP03 117 aa9.42□□□□□ -0.9
UPK1A-202ENST00000379013 TEX43Q6ZNM6 134 aa9.42□□□□□ -0.9
UPK1A-202ENST00000379013 ZNF664Q8N3J9 261 aa9.42□□□□□ -0.9
UPK1A-202ENST00000379013 RMI2Q96E14 147 aa9.42□□□□□ -0.9
UPK1A-202ENST00000379013 URB1-AS1Q96HZ7 61 aa9.42□□□□□ -0.9
UPK1A-202ENST00000379013 LEPROTL1O95214 131 aa9.41□□□□□ -0.9
UPK1A-202ENST00000379013 S100A2P29034 98 aa9.41□□□□□ -0.9
UPK1A-202ENST00000379013 DNAH5Q8TE73 4624 aa9.4□□□□□ -0.9
UPK1A-202ENST00000379013 TRAV8-4A0A0B4J246 113 aa9.4□□□□□ -0.9
UPK1A-202ENST00000379013 NBDYA0A0U1RRE5 68 aa9.4□□□□□ -0.9
UPK1A-202ENST00000379013 A0A1B0GVY2 172 aa9.4□□□□□ -0.9
UPK1A-202ENST00000379013 MIAQ16674 131 aa9.4□□□□□ -0.9
UPK1A-202ENST00000379013 Q6ZR54 194 aa9.4□□□□□ -0.9
UPK1A-202ENST00000379013 NFE4Q86UQ8 179 aa9.4□□□□□ -0.9
UPK1A-202ENST00000379013 Q8N976 141 aa9.4□□□□□ -0.9
UPK1A-202ENST00000379013 VCX2Q9H322 139 aa9.4□□□□□ -0.9
UPK1A-202ENST00000379013 CDC42SE2Q9NRR3 84 aa9.4□□□□□ -0.9
UPK1A-202ENST00000379013 KLK12Q9UKR0 248 aa9.4□□□□□ -0.9
UPK1A-202ENST00000379013 COX11Q9Y6N1 276 aa9.4□□□□□ -0.9
UPK1A-202ENST00000379013 HSPG2P98160 4391 aa9.4□□□□□ -0.9
UPK1A-202ENST00000379013 IGIPA6NJ69 53 aa9.39□□□□□ -0.91
UPK1A-202ENST00000379013 IBA57-AS1B1ANH7 110 aa9.39□□□□□ -0.91
UPK1A-202ENST00000379013 REG3AQ06141 175 aa9.39□□□□□ -0.91
UPK1A-202ENST00000379013 PMCHL1Q16048 86 aa9.39□□□□□ -0.91
UPK1A-202ENST00000379013 PDZD11Q5EBL8 140 aa9.39□□□□□ -0.91
UPK1A-202ENST00000379013 KRTAP17-1Q9BYP8 105 aa9.39□□□□□ -0.91
UPK1A-202ENST00000379013 IGLV4-60A0A075B6I1 120 aa9.38□□□□□ -0.91
UPK1A-202ENST00000379013 LINC00310P59036 64 aa9.38□□□□□ -0.91
UPK1A-202ENST00000379013 SEC11AP67812 179 aa9.38□□□□□ -0.91
UPK1A-202ENST00000379013 LINC00269Q8N2A0 174 aa9.38□□□□□ -0.91
UPK1A-202ENST00000379013 FAM19A2Q8N3H0 131 aa9.38□□□□□ -0.91
UPK1A-202ENST00000379013 IFI27L1Q96BM0 104 aa9.38□□□□□ -0.91
UPK1A-202ENST00000379013 PRR34Q9NV39 138 aa9.38□□□□□ -0.91
UPK1A-202ENST00000379013 IGLV4-3A0A075B6K6 122 aa9.37□□□□□ -0.91
UPK1A-202ENST00000379013 A0A096LNJ9 63 aa9.37□□□□□ -0.91
UPK1A-202ENST00000379013 IFITM10A6NMD0 228 aa9.37□□□□□ -0.91
UPK1A-202ENST00000379013 SS18Q15532 418 aa9.37□□□□□ -0.91
UPK1A-202ENST00000379013 Q6ZUT4 128 aa9.37□□□□□ -0.91
UPK1A-202ENST00000379013 UBE2WQ96B02 151 aa9.37□□□□□ -0.91
UPK1A-202ENST00000379013 C1orf43Q9BWL3 253 aa9.37□□□□□ -0.91
UPK1A-202ENST00000379013 TM2D2Q9BX73 214 aa9.37□□□□□ -0.91
UPK1A-202ENST00000379013 PCLOQ9Y6V0 5065 aa9.36□□□□□ -0.91
UPK1A-202ENST00000379013 PMVKQ15126 192 aa9.36□□□□□ -0.91
UPK1A-202ENST00000379013 MAP1LC3CQ9BXW4 147 aa9.36□□□□□ -0.91
UPK1A-202ENST00000379013 APOBP04114 4563 aaKnown RBP9.36□□□□□ -0.91
UPK1A-202ENST00000379013 PRSS1P07477 247 aa9.35□□□□□ -0.91
UPK1A-202ENST00000379013 AKR1D1P51857 326 aa9.35□□□□□ -0.91
UPK1A-202ENST00000379013 NUPR1O60356 82 aa9.34□□□□□ -0.91
UPK1A-202ENST00000379013 FABP4P15090 132 aa9.34□□□□□ -0.91
UPK1A-202ENST00000379013 AMELXQ99217 191 aa9.34□□□□□ -0.91
UPK1A-202ENST00000379013 TMA7Q9Y2S6 64 aaKnown RBP9.34□□□□□ -0.91
UPK1A-202ENST00000379013 TRAV12-1A0A0B4J245 112 aa9.33□□□□□ -0.92
UPK1A-202ENST00000379013 IGKV3OR2-268A0A0C4DH90 116 aa9.33□□□□□ -0.92
UPK1A-202ENST00000379013 SNRPEP62304 92 aaKnown RBP9.33□□□□□ -0.92
UPK1A-202ENST00000379013 CLPSL2Q6UWE3 100 aa9.33□□□□□ -0.92
UPK1A-202ENST00000379013 HIST3H2BBQ8N257 126 aa9.33□□□□□ -0.92
UPK1A-202ENST00000379013 Q8N3U1 123 aa9.33□□□□□ -0.92
UPK1A-202ENST00000379013 BAALCQ8WXS3 180 aa9.33□□□□□ -0.92
UPK1A-202ENST00000379013 TRAV13-1A0A0B4J241 112 aa9.32□□□□□ -0.92
UPK1A-202ENST00000379013 LINC00959A0A1B0GUT2 108 aa9.32□□□□□ -0.92
UPK1A-202ENST00000379013 C5orf52A6NGY3 159 aa9.32□□□□□ -0.92
UPK1A-202ENST00000379013 PRSS29PA6NIE9 313 aa9.32□□□□□ -0.92
UPK1A-202ENST00000379013 PSCAO43653 123 aa9.32□□□□□ -0.92
UPK1A-202ENST00000379013 Q9HAA7 133 aa9.32□□□□□ -0.92
UPK1A-202ENST00000379013 ABCA13Q86UQ4 5058 aa9.32□□□□□ -0.92
UPK1A-202ENST00000379013 IGKV2D-24A0A075B6R9 120 aa9.31□□□□□ -0.92
UPK1A-202ENST00000379013 C20orf202A1L168 122 aa9.31□□□□□ -0.92
UPK1A-202ENST00000379013 HERVK_113P63121 156 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms