RNA–Protein interactions for RNA: ENST00000378125.4

PCDHA4-201, Transcript of protocadherin alpha 4, humanhuman

TSL 5 BASIC

Gene PCDHA4, Length 2,328 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4-201ENST00000378125 LOC100131303A0A0U1RQF7 123 aa13.73□□□□□ -0.21
PCDHA4-201ENST00000378125 IGHV3-30P01768 117 aa13.73□□□□□ -0.21
PCDHA4-201ENST00000378125 IGHV3-30-5P0DP03 117 aa13.73□□□□□ -0.21
PCDHA4-201ENST00000378125 RBX1P62877 108 aa13.73□□□□□ -0.21
PCDHA4-201ENST00000378125 NDUFA11Q86Y39 141 aa13.73□□□□□ -0.21
PCDHA4-201ENST00000378125 C16orf74Q96GX8 76 aa13.73□□□□□ -0.21
PCDHA4-201ENST00000378125 TMEM238LA0A1B0GVL6 79 aa13.72□□□□□ -0.21
PCDHA4-201ENST00000378125 A6NJY4 79 aa13.72□□□□□ -0.21
PCDHA4-201ENST00000378125 NTM-AS1Q6ZSK4 140 aa13.72□□□□□ -0.21
PCDHA4-201ENST00000378125 C10orf126Q8N4M7 172 aa13.72□□□□□ -0.21
PCDHA4-201ENST00000378125 TENM1Q9UKZ4 2725 aa13.72□□□□□ -0.21
PCDHA4-201ENST00000378125 H3BMG7 143 aa13.72□□□□□ -0.21
PCDHA4-201ENST00000378125 MTURNQ8N3F0 131 aa13.72□□□□□ -0.21
PCDHA4-201ENST00000378125 LINC00482Q8N8I6 264 aa13.72□□□□□ -0.21
PCDHA4-201ENST00000378125 DAZ2Q13117 558 aaKnown RBP13.71□□□□□ -0.21
PCDHA4-201ENST00000378125 NSD1Q96L73 2696 aaPredicted RBP13.71□□□□□ -0.22
PCDHA4-201ENST00000378125 NBEAL2Q6ZNJ1 2754 aa13.7□□□□□ -0.22
PCDHA4-201ENST00000378125 FAM110AQ9BQ89 295 aa13.7□□□□□ -0.22
PCDHA4-201ENST00000378125 C1QTNF4Q9BXJ3 329 aa13.7□□□□□ -0.22
PCDHA4-201ENST00000378125 UBE2D1P51668 147 aa13.7□□□□□ -0.22
PCDHA4-201ENST00000378125 GEMIN7Q9H840 131 aaKnown RBP13.7□□□□□ -0.22
PCDHA4-201ENST00000378125 SPANXB1Q9NS25 103 aaPredicted RBP13.7□□□□□ -0.22
PCDHA4-201ENST00000378125 TINCRA0A1B0GVN0 87 aa13.69□□□□□ -0.22
PCDHA4-201ENST00000378125 CRYBA4P53673 196 aa13.69□□□□□ -0.22
PCDHA4-201ENST00000378125 UBE2D3P61077 147 aa13.68□□□□□ -0.22
PCDHA4-201ENST00000378125 UBE2D2P62837 147 aa13.68□□□□□ -0.22
PCDHA4-201ENST00000378125 COX6A2Q02221 97 aa13.68□□□□□ -0.22
PCDHA4-201ENST00000378125 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.68□□□□□ -0.22
PCDHA4-201ENST00000378125 CDKN2A-AS1Q9UH64 79 aa13.68□□□□□ -0.22
PCDHA4-201ENST00000378125 A0A0J9YXY3 114 aa13.68□□□□□ -0.22
PCDHA4-201ENST00000378125 TSPAN13O95857 204 aa13.68□□□□□ -0.22
PCDHA4-201ENST00000378125 CFC1BP0CG36 223 aa13.68□□□□□ -0.22
PCDHA4-201ENST00000378125 CFC1P0CG37 223 aa13.68□□□□□ -0.22
PCDHA4-201ENST00000378125 TRGV4A0A0C4DH28 118 aa13.67□□□□□ -0.22
PCDHA4-201ENST00000378125 IGHV1-58A0A0C4DH39 117 aa13.67□□□□□ -0.22
PCDHA4-201ENST00000378125 TRBV10-1A0A0K0K1A3 114 aa13.67□□□□□ -0.22
PCDHA4-201ENST00000378125 HIVEP1P15822 2718 aa13.67□□□□□ -0.22
PCDHA4-201ENST00000378125 LOC107984156A0A0G2JMH3 177 aa13.67□□□□□ -0.22
PCDHA4-201ENST00000378125 MUSTN1Q8IVN3 82 aa13.67□□□□□ -0.22
PCDHA4-201ENST00000378125 ARL17AQ8IVW1 177 aa13.67□□□□□ -0.22
PCDHA4-201ENST00000378125 TRAV13-1A0A0B4J241 112 aa13.66□□□□□ -0.22
PCDHA4-201ENST00000378125 CRLF1O75462 422 aa13.66□□□□□ -0.22
PCDHA4-201ENST00000378125 DEFB130BP0DP73 79 aa13.66□□□□□ -0.22
PCDHA4-201ENST00000378125 DEFB130AP0DP74 79 aa13.66□□□□□ -0.22
PCDHA4-201ENST00000378125 DAZ4Q86SG3 579 aaKnown RBP13.66□□□□□ -0.22
PCDHA4-201ENST00000378125 VSIG2Q96IQ7 327 aa13.66□□□□□ -0.22
PCDHA4-201ENST00000378125 DAZ3Q9NR90 486 aaKnown RBP13.66□□□□□ -0.22
PCDHA4-201ENST00000378125 A4D1N5 150 aa13.65□□□□□ -0.22
PCDHA4-201ENST00000378125 NDUFA12Q9UI09 145 aa13.65□□□□□ -0.22
PCDHA4-201ENST00000378125 NPC2P61916 151 aa13.64□□□□□ -0.23
PCDHA4-201ENST00000378125 RPL24P83731 157 aaKnown RBP13.64□□□□□ -0.23
PCDHA4-201ENST00000378125 WFDC2Q14508 124 aa13.64□□□□□ -0.23
PCDHA4-201ENST00000378125 OVOL2Q9BRP0 275 aa13.64□□□□□ -0.23
PCDHA4-201ENST00000378125 H7C2G1 150 aa13.63□□□□□ -0.23
PCDHA4-201ENST00000378125 PRSS2P07478 247 aa13.63□□□□□ -0.23
PCDHA4-201ENST00000378125 VPS25Q9BRG1 176 aa13.63□□□□□ -0.23
PCDHA4-201ENST00000378125 K7ERU9 68 aa13.62□□□□□ -0.23
PCDHA4-201ENST00000378125 EIF4EBP3O60516 100 aaPredicted RBP13.62□□□□□ -0.23
PCDHA4-201ENST00000378125 ADAMTSL4-AS1Q5T5F5 129 aa13.62□□□□□ -0.23
PCDHA4-201ENST00000378125 LINC00242Q5T6M2 205 aa13.62□□□□□ -0.23
PCDHA4-201ENST00000378125 TMEM238C9JI98 176 aa13.62□□□□□ -0.23
PCDHA4-201ENST00000378125 UBE2L6O14933 153 aa13.61□□□□□ -0.23
PCDHA4-201ENST00000378125 PSMB2P49721 201 aa13.61□□□□□ -0.23
PCDHA4-201ENST00000378125 FHL2Q14192 279 aa13.61□□□□□ -0.23
PCDHA4-201ENST00000378125 SBSPONQ8IVN8 264 aa13.61□□□□□ -0.23
PCDHA4-201ENST00000378125 ATRQ13535 2644 aa13.61□□□□□ -0.23
PCDHA4-201ENST00000378125 TMEM101Q96IK0 257 aa13.61□□□□□ -0.23
PCDHA4-201ENST00000378125 LITAFQ99732 161 aa13.6□□□□□ -0.23
PCDHA4-201ENST00000378125 TRBV6-4A0A1B0GX49 114 aa13.59□□□□□ -0.23
PCDHA4-201ENST00000378125 TMEM243Q9BU79 118 aa13.59□□□□□ -0.23
PCDHA4-201ENST00000378125 PRO1854Q9UHT4 67 aa13.59□□□□□ -0.23
PCDHA4-201ENST00000378125 IGKV3OR2-268A0A0C4DH90 116 aa13.59□□□□□ -0.23
PCDHA4-201ENST00000378125 DAND5Q8N907 189 aa13.59□□□□□ -0.23
PCDHA4-201ENST00000378125 CDC42SE2Q9NRR3 84 aa13.59□□□□□ -0.23
PCDHA4-201ENST00000378125 TRRAPQ9Y4A5 3859 aa13.59□□□□□ -0.23
PCDHA4-201ENST00000378125 TIRAPP58753 221 aa13.58□□□□□ -0.23
PCDHA4-201ENST00000378125 GAGE6Q13070 117 aa13.58□□□□□ -0.23
PCDHA4-201ENST00000378125 SH2D6Q7Z4S9 175 aa13.58□□□□□ -0.23
PCDHA4-201ENST00000378125 ZNF625Q96I27 306 aaPredicted RBP13.58□□□□□ -0.23
PCDHA4-201ENST00000378125 TEX48A0A1B0GUV7 120 aa13.58□□□□□ -0.24
PCDHA4-201ENST00000378125 DEFB4AO15263 64 aa13.57□□□□□ -0.24
PCDHA4-201ENST00000378125 A0A0U1RRA0 63 aa13.57□□□□□ -0.24
PCDHA4-201ENST00000378125 F8W1H4 67 aa13.56□□□□□ -0.24
PCDHA4-201ENST00000378125 HERVK_113P63121 156 aa13.56□□□□□ -0.24
PCDHA4-201ENST00000378125 ZFAND6Q6FIF0 208 aa13.56□□□□□ -0.24
PCDHA4-201ENST00000378125 IGLV5-45A0A087WSX0 123 aa13.56□□□□□ -0.24
PCDHA4-201ENST00000378125 ETDBQ3ZM63 59 aa13.56□□□□□ -0.24
PCDHA4-201ENST00000378125 X6R8D5 127 aa13.56□□□□□ -0.24
PCDHA4-201ENST00000378125 SCGB1C2P0DMR2 95 aa13.55□□□□□ -0.24
PCDHA4-201ENST00000378125 C9orf66Q5T8R8 295 aa13.55□□□□□ -0.24
PCDHA4-201ENST00000378125 GTSF1LQ9H1H1 148 aa13.55□□□□□ -0.24
PCDHA4-201ENST00000378125 CSDC2Q9Y534 153 aaKnown RBP13.55□□□□□ -0.24
PCDHA4-201ENST00000378125 TEP1Q99973 2627 aaKnown RBP13.55□□□□□ -0.24
PCDHA4-201ENST00000378125 G3V4G9 280 aa13.55□□□□□ -0.24
PCDHA4-201ENST00000378125 PRO0461Q9UI25 63 aa13.55□□□□□ -0.24
PCDHA4-201ENST00000378125 DEFB135Q30KP9 77 aa13.54□□□□□ -0.24
PCDHA4-201ENST00000378125 TCL1BO95988 128 aa13.53□□□□□ -0.24
PCDHA4-201ENST00000378125 CHCHD5Q9BSY4 110 aa13.53□□□□□ -0.24
PCDHA4-201ENST00000378125 Q9H8V8 135 aa13.53□□□□□ -0.24
PCDHA4-201ENST00000378125 A0A096LPF7 62 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms