RNA–Protein interactions for RNA: ENST00000378122.4

PCDHA9-201, Transcript of protocadherin alpha 9, humanhuman

BASIC

Gene PCDHA9, Length 6,900 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA9-201ENST00000378122 FAM236DA0A1B0GTK5 79 aa8.99□□□□□ -0.97
PCDHA9-201ENST00000378122 FAM236CP0DP71 79 aa8.99□□□□□ -0.97
PCDHA9-201ENST00000378122 NANOS2P60321 138 aaKnown RBP8.98□□□□□ -0.97
PCDHA9-201ENST00000378122 FAM222AQ5U5X8 452 aa8.98□□□□□ -0.97
PCDHA9-201ENST00000378122 Q6YL49 198 aa8.98□□□□□ -0.97
PCDHA9-201ENST00000378122 LINC00269Q8N2A0 174 aa8.98□□□□□ -0.97
PCDHA9-201ENST00000378122 CUL9Q8IWT3 2517 aa8.98□□□□□ -0.97
PCDHA9-201ENST00000378122 TMEM89A2RUT3 159 aa8.98□□□□□ -0.97
PCDHA9-201ENST00000378122 MRPS12O15235 138 aaKnown RBP8.98□□□□□ -0.97
PCDHA9-201ENST00000378122 SCXQ7RTU7 201 aa8.98□□□□□ -0.97
PCDHA9-201ENST00000378122 C20orf197Q8N268 126 aa8.98□□□□□ -0.97
PCDHA9-201ENST00000378122 WFDC10AQ9H1F0 79 aa8.97□□□□□ -0.97
PCDHA9-201ENST00000378122 ZNF22P17026 224 aaPredicted RBP8.97□□□□□ -0.97
PCDHA9-201ENST00000378122 Q6ZTI0 123 aa8.97□□□□□ -0.97
PCDHA9-201ENST00000378122 LINC00574Q9H8X3 128 aa8.97□□□□□ -0.97
PCDHA9-201ENST00000378122 DCANP1Q8TF63 244 aa8.97□□□□□ -0.97
PCDHA9-201ENST00000378122 IGLV4-3A0A075B6K6 122 aa8.96□□□□□ -0.97
PCDHA9-201ENST00000378122 PIK3CD-AS1Q5SR53 167 aa8.96□□□□□ -0.97
PCDHA9-201ENST00000378122 Q6ZSV7 163 aa8.96□□□□□ -0.97
PCDHA9-201ENST00000378122 TRBV30A0A0K0K1B3 111 aa8.96□□□□□ -0.98
PCDHA9-201ENST00000378122 CCDC179H3BU77 68 aa8.96□□□□□ -0.98
PCDHA9-201ENST00000378122 PROK1P58294 105 aa8.96□□□□□ -0.98
PCDHA9-201ENST00000378122 C10orf99Q6UWK7 81 aa8.96□□□□□ -0.98
PCDHA9-201ENST00000378122 TRAV10A0A0B4J240 114 aa8.95□□□□□ -0.98
PCDHA9-201ENST00000378122 A0A0U1RQV1 116 aa8.95□□□□□ -0.98
PCDHA9-201ENST00000378122 WFDC10BQ8IUB3 73 aa8.95□□□□□ -0.98
PCDHA9-201ENST00000378122 SPTSSBQ8NFR3 76 aa8.95□□□□□ -0.98
PCDHA9-201ENST00000378122 CDKN2A-AS1Q9UH64 79 aa8.95□□□□□ -0.98
PCDHA9-201ENST00000378122 LINC00308Q8TCZ7 52 aa8.94□□□□□ -0.98
PCDHA9-201ENST00000378122 COL4A4P53420 1690 aaPredicted RBP8.94□□□□□ -0.98
PCDHA9-201ENST00000378122 PDE6GP18545 87 aa8.94□□□□□ -0.98
PCDHA9-201ENST00000378122 ODF3Q96PU9 254 aa8.94□□□□□ -0.98
PCDHA9-201ENST00000378122 BPY2O14599 106 aa8.94□□□□□ -0.98
PCDHA9-201ENST00000378122 CEP192Q8TEP8 1941 aa8.93□□□□□ -0.98
PCDHA9-201ENST00000378122 REG3AQ06141 175 aa8.93□□□□□ -0.98
PCDHA9-201ENST00000378122 C22orf34Q6ZV56 151 aa8.93□□□□□ -0.98
PCDHA9-201ENST00000378122 TRBV10-1A0A0K0K1A3 114 aa8.93□□□□□ -0.98
PCDHA9-201ENST00000378122 C18orf65Q6ZTR6 163 aa8.93□□□□□ -0.98
PCDHA9-201ENST00000378122 PRO0255Q9UI72 69 aa8.93□□□□□ -0.98
PCDHA9-201ENST00000378122 A8MZ25 164 aa8.93□□□□□ -0.98
PCDHA9-201ENST00000378122 PRRC2AP48634 2157 aaKnown RBP8.93□□□□□ -0.98
PCDHA9-201ENST00000378122 IGKV2-28A0A075B6P5 120 aa8.93□□□□□ -0.98
PCDHA9-201ENST00000378122 NDUFC2-KCTD14E9PQ53 114 aa8.93□□□□□ -0.98
PCDHA9-201ENST00000378122 IGKV2D-28P01615 120 aa8.93□□□□□ -0.98
PCDHA9-201ENST00000378122 ARHGAP32A7KAX9 2087 aa8.93□□□□□ -0.98
PCDHA9-201ENST00000378122 RPL37AP8A6NKH3 93 aa8.93□□□□□ -0.98
PCDHA9-201ENST00000378122 PRM2P04554 102 aa8.93□□□□□ -0.98
PCDHA9-201ENST00000378122 ZFAND3Q9H8U3 227 aa8.92□□□□□ -0.98
PCDHA9-201ENST00000378122 CFAP126Q5VTH2 177 aa8.92□□□□□ -0.98
PCDHA9-201ENST00000378122 M0QY20 66 aa8.91□□□□□ -0.98
PCDHA9-201ENST00000378122 CHCHD10Q8WYQ3 142 aaPredicted RBP8.91□□□□□ -0.98
PCDHA9-201ENST00000378122 LY6LH3BQJ8 138 aa8.91□□□□□ -0.98
PCDHA9-201ENST00000378122 NDUFA7O95182 113 aa8.91□□□□□ -0.98
PCDHA9-201ENST00000378122 PLXNB1O43157 2135 aa8.91□□□□□ -0.98
PCDHA9-201ENST00000378122 Q6Q795 121 aa8.91□□□□□ -0.98
PCDHA9-201ENST00000378122 BRI3O95415 125 aa8.9□□□□□ -0.98
PCDHA9-201ENST00000378122 UBE2D2P62837 147 aa8.9□□□□□ -0.98
PCDHA9-201ENST00000378122 XGP55808 180 aa8.9□□□□□ -0.98
PCDHA9-201ENST00000378122 NRACQ8N912 160 aa8.9□□□□□ -0.98
PCDHA9-201ENST00000378122 K7EQG2 157 aa8.9□□□□□ -0.99
PCDHA9-201ENST00000378122 LMO4P61968 165 aa8.9□□□□□ -0.99
PCDHA9-201ENST00000378122 ATP5EP2Q5VTU8 51 aa8.89□□□□□ -0.99
PCDHA9-201ENST00000378122 XAGE1AQ9HD64 81 aa8.89□□□□□ -0.99
PCDHA9-201ENST00000378122 SNURFQ9Y675 71 aa8.89□□□□□ -0.99
PCDHA9-201ENST00000378122 ATG2AQ2TAZ0 1938 aa8.89□□□□□ -0.99
PCDHA9-201ENST00000378122 TNFRSF13BO14836 293 aaPredicted RBP8.89□□□□□ -0.99
PCDHA9-201ENST00000378122 LINC01006Q8NI28 216 aa8.89□□□□□ -0.99
PCDHA9-201ENST00000378122 HIVEP3Q5T1R4 2406 aa8.89□□□□□ -0.99
PCDHA9-201ENST00000378122 UFSP1Q6NVU6 142 aa8.89□□□□□ -0.99
PCDHA9-201ENST00000378122 PRO3102Q9H379 93 aa8.89□□□□□ -0.99
PCDHA9-201ENST00000378122 IGLV5-52A0A0A0MRZ9 124 aa8.88□□□□□ -0.99
PCDHA9-201ENST00000378122 GAS8-AS1O95177 125 aa8.88□□□□□ -0.99
PCDHA9-201ENST00000378122 H7C423 109 aa8.88□□□□□ -0.99
PCDHA9-201ENST00000378122 Q8N976 141 aa8.88□□□□□ -0.99
PCDHA9-201ENST00000378122 CIRBP-AS1Q8TBR5 109 aa8.88□□□□□ -0.99
PCDHA9-201ENST00000378122 PRR9Q5T870 116 aa8.88□□□□□ -0.99
PCDHA9-201ENST00000378122 Q6ZS46 218 aa8.88□□□□□ -0.99
PCDHA9-201ENST00000378122 MUC22E2RYF6 1773 aaPredicted RBP8.88□□□□□ -0.99
PCDHA9-201ENST00000378122 PCNX3Q9H6A9 2034 aa8.88□□□□□ -0.99
PCDHA9-201ENST00000378122 TSHBP01222 138 aa8.87□□□□□ -0.99
PCDHA9-201ENST00000378122 FBXL19-AS1Q494R0 122 aa8.87□□□□□ -0.99
PCDHA9-201ENST00000378122 DEFB114Q30KQ6 69 aa8.87□□□□□ -0.99
PCDHA9-201ENST00000378122 FAM240AA0A1B0GVK7 77 aa8.87□□□□□ -0.99
PCDHA9-201ENST00000378122 KIR2DL5BQ8NHK3 375 aa8.87□□□□□ -0.99
PCDHA9-201ENST00000378122 NAV3Q8IVL0 2385 aa8.86□□□□□ -0.99
PCDHA9-201ENST00000378122 ABCA2Q9BZC7 2435 aa8.86□□□□□ -0.99
PCDHA9-201ENST00000378122 LINC00694P0DN24 101 aa8.86□□□□□ -0.99
PCDHA9-201ENST00000378122 LINC00310P59036 64 aa8.86□□□□□ -0.99
PCDHA9-201ENST00000378122 IBA57-AS1B1ANH7 110 aa8.85□□□□□ -0.99
PCDHA9-201ENST00000378122 C11orf21Q9P2W6 132 aa8.85□□□□□ -0.99
PCDHA9-201ENST00000378122 SERP2Q8N6R1 65 aa8.85□□□□□ -0.99
PCDHA9-201ENST00000378122 CLUHP3Q96NS8 147 aa8.85□□□□□ -0.99
PCDHA9-201ENST00000378122 RNASE3P12724 160 aaKnown RBP8.84□□□□□ -0.99
PCDHA9-201ENST00000378122 CSPG4Q6UVK1 2322 aa8.84□□□□□ -0.99
PCDHA9-201ENST00000378122 LST1O00453 97 aa8.84□□□□□ -0.99
PCDHA9-201ENST00000378122 RAI1Q7Z5J4 1906 aaPredicted RBP8.84□□□□□ -0.99
PCDHA9-201ENST00000378122 TRBV6-8A0A0A6YYG3 113 aa8.84□□□□□ -0.99
PCDHA9-201ENST00000378122 J3QL48 77 aa8.83□□□□□ -1
PCDHA9-201ENST00000378122 MRPL55Q7Z7F7 128 aaKnown RBP8.83□□□□□ -1
PCDHA9-201ENST00000378122 IMUPQ9GZP8 106 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms