RNA–Protein interactions for RNA: ENST00000378043.8

BEST1-201, Transcript of bestrophin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BEST1, Length 2,740 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-201ENST00000378043 IL17DQ8TAD2 202 aa7.86□□□□□ -1.15
BEST1-201ENST00000378043 CDKN2A-AS1Q9UH64 79 aa7.86□□□□□ -1.15
BEST1-201ENST00000378043 IGHV3OR16-12A0A075B7B8 117 aa7.85□□□□□ -1.15
BEST1-201ENST00000378043 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.85□□□□□ -1.15
BEST1-201ENST00000378043 PRSS2P07478 247 aa7.85□□□□□ -1.15
BEST1-201ENST00000378043 SCGB1A1P11684 91 aa7.85□□□□□ -1.15
BEST1-201ENST00000378043 PPDPFLQ8WWR9 84 aa7.85□□□□□ -1.15
BEST1-201ENST00000378043 A0A1W2PRX2 142 aa7.85□□□□□ -1.15
BEST1-201ENST00000378043 DNAJC9-AS1A6NH13 148 aa7.85□□□□□ -1.15
BEST1-201ENST00000378043 ANKRD29Q8N6D5 301 aa7.85□□□□□ -1.15
BEST1-201ENST00000378043 SPANXDQ9BXN6 97 aa7.85□□□□□ -1.15
BEST1-201ENST00000378043 SPANXCQ9NY87 97 aa7.85□□□□□ -1.15
BEST1-201ENST00000378043 IGLV5-45A0A087WSX0 123 aa7.84□□□□□ -1.15
BEST1-201ENST00000378043 COX6A2Q02221 97 aa7.84□□□□□ -1.15
BEST1-201ENST00000378043 ZFAND6Q6FIF0 208 aa7.84□□□□□ -1.15
BEST1-201ENST00000378043 TMEM86BQ8N661 226 aa7.84□□□□□ -1.15
BEST1-201ENST00000378043 ESM1Q9NQ30 184 aa7.84□□□□□ -1.15
BEST1-201ENST00000378043 C9JAW5 83 aa7.84□□□□□ -1.15
BEST1-201ENST00000378043 LINC00694P0DN24 101 aa7.84□□□□□ -1.15
BEST1-201ENST00000378043 STHQ8IWL8 128 aa7.84□□□□□ -1.15
BEST1-201ENST00000378043 WFDC11Q8NEX6 87 aa7.84□□□□□ -1.15
BEST1-201ENST00000378043 GEMIN7Q9H840 131 aaKnown RBP7.84□□□□□ -1.15
BEST1-201ENST00000378043 SLC25A20O43772 301 aa7.83□□□□□ -1.16
BEST1-201ENST00000378043 MIAQ16674 131 aa7.83□□□□□ -1.16
BEST1-201ENST00000378043 TENM4Q6N022 2769 aa7.83□□□□□ -1.16
BEST1-201ENST00000378043 TRGV1A0A0A0MS02 117 aa7.83□□□□□ -1.16
BEST1-201ENST00000378043 TRAV25A0A0B4J276 109 aa7.83□□□□□ -1.16
BEST1-201ENST00000378043 CCL24O00175 119 aa7.83□□□□□ -1.16
BEST1-201ENST00000378043 TRIAP1O43715 76 aa7.83□□□□□ -1.16
BEST1-201ENST00000378043 TIRAPP58753 221 aa7.83□□□□□ -1.16
BEST1-201ENST00000378043 NPC2P61916 151 aa7.83□□□□□ -1.16
BEST1-201ENST00000378043 TMEM101Q96IK0 257 aa7.83□□□□□ -1.16
BEST1-201ENST00000378043 TRBV30A0A0K0K1B3 111 aa7.82□□□□□ -1.16
BEST1-201ENST00000378043 NDUFA7O95182 113 aa7.82□□□□□ -1.16
BEST1-201ENST00000378043 NTM-AS1Q6ZSK4 140 aa7.82□□□□□ -1.16
BEST1-201ENST00000378043 Q6ZTI0 123 aa7.82□□□□□ -1.16
BEST1-201ENST00000378043 Q1RN00 199 aa7.82□□□□□ -1.16
BEST1-201ENST00000378043 LINC00242Q5T6M2 205 aa7.81□□□□□ -1.16
BEST1-201ENST00000378043 DAND5Q8N907 189 aa7.81□□□□□ -1.16
BEST1-201ENST00000378043 PDZD2O15018 2839 aa7.81□□□□□ -1.16
BEST1-201ENST00000378043 M0QXV9 152 aa7.81□□□□□ -1.16
BEST1-201ENST00000378043 GIG44P09565 113 aaPredicted RBP7.81□□□□□ -1.16
BEST1-201ENST00000378043 XGP55808 180 aa7.81□□□□□ -1.16
BEST1-201ENST00000378043 DGAT2L7PQ6IED9 249 aa7.81□□□□□ -1.16
BEST1-201ENST00000378043 CITED2Q99967 270 aaPredicted RBP7.8□□□□□ -1.16
BEST1-201ENST00000378043 IGLV5-39A0A0G2JS06 123 aa7.8□□□□□ -1.16
BEST1-201ENST00000378043 NDUFA1O15239 70 aa7.8□□□□□ -1.16
BEST1-201ENST00000378043 MT-ATP8P03928 68 aa7.8□□□□□ -1.16
BEST1-201ENST00000378043 LINC01620Q4KN68 170 aa7.8□□□□□ -1.16
BEST1-201ENST00000378043 TIMM17BO60830 172 aa7.8□□□□□ -1.16
BEST1-201ENST00000378043 ATXN8Q156A1 80 aa7.8□□□□□ -1.16
BEST1-201ENST00000378043 RNF183Q96D59 192 aa7.8□□□□□ -1.16
BEST1-201ENST00000378043 ICOSQ9Y6W8 199 aa7.8□□□□□ -1.16
BEST1-201ENST00000378043 K7EQD1 137 aa7.79□□□□□ -1.16
BEST1-201ENST00000378043 LINC01600Q96MT4 127 aa7.79□□□□□ -1.16
BEST1-201ENST00000378043 ITPR2Q14571 2701 aa7.79□□□□□ -1.16
BEST1-201ENST00000378043 TRBV10-1A0A0K0K1A3 114 aa7.79□□□□□ -1.16
BEST1-201ENST00000378043 PLAC8L1A1L4L8 177 aa7.79□□□□□ -1.16
BEST1-201ENST00000378043 FAM19A3Q7Z5A8 133 aa7.79□□□□□ -1.16
BEST1-201ENST00000378043 WFDC10AQ9H1F0 79 aa7.79□□□□□ -1.16
BEST1-201ENST00000378043 CSDC2Q9Y534 153 aaKnown RBP7.79□□□□□ -1.16
BEST1-201ENST00000378043 HERVK_113P63121 156 aa7.78□□□□□ -1.16
BEST1-201ENST00000378043 RPL36AP83881 106 aaKnown RBP7.78□□□□□ -1.16
BEST1-201ENST00000378043 RPL36ALQ969Q0 106 aaKnown RBP7.78□□□□□ -1.16
BEST1-201ENST00000378043 NOP10Q9NPE3 64 aaKnown RBP7.78□□□□□ -1.16
BEST1-201ENST00000378043 TRAV4A0A0B4J268 109 aa7.78□□□□□ -1.16
BEST1-201ENST00000378043 SMIM1B2RUZ4 78 aa7.78□□□□□ -1.16
BEST1-201ENST00000378043 Q9H8V8 135 aa7.78□□□□□ -1.16
BEST1-201ENST00000378043 ANK3Q12955 4377 aaKnown RBP7.77□□□□□ -1.17
BEST1-201ENST00000378043 TRAV13-1A0A0B4J241 112 aa7.77□□□□□ -1.17
BEST1-201ENST00000378043 DAZ2Q13117 558 aaKnown RBP7.77□□□□□ -1.17
BEST1-201ENST00000378043 HIST2H2BCQ6DN03 193 aa7.77□□□□□ -1.17
BEST1-201ENST00000378043 DAZ4Q86SG3 579 aaKnown RBP7.77□□□□□ -1.17
BEST1-201ENST00000378043 LINC01006Q8NI28 216 aa7.77□□□□□ -1.17
BEST1-201ENST00000378043 NTN5Q8WTR8 489 aaPredicted RBP7.77□□□□□ -1.17
BEST1-201ENST00000378043 DAZ3Q9NR90 486 aaKnown RBP7.77□□□□□ -1.17
BEST1-201ENST00000378043 CDC42SE2Q9NRR3 84 aa7.77□□□□□ -1.17
BEST1-201ENST00000378043 NOTCH2Q04721 2471 aa7.77□□□□□ -1.17
BEST1-201ENST00000378043 GAGE12JA6NER3 117 aa7.77□□□□□ -1.17
BEST1-201ENST00000378043 IFITM1P13164 125 aa7.77□□□□□ -1.17
BEST1-201ENST00000378043 KRTAP1-1Q07627 177 aa7.77□□□□□ -1.17
BEST1-201ENST00000378043 GAGE4Q13068 117 aa7.77□□□□□ -1.17
BEST1-201ENST00000378043 GAGE5Q13069 117 aa7.77□□□□□ -1.17
BEST1-201ENST00000378043 ZNF625Q96I27 306 aaPredicted RBP7.77□□□□□ -1.17
BEST1-201ENST00000378043 YAE1D1Q9NRH1 226 aa7.77□□□□□ -1.17
BEST1-201ENST00000378043 TRBV10-2A0A0K0K1G8 114 aa7.76□□□□□ -1.17
BEST1-201ENST00000378043 C19orf73Q9NVV2 129 aa7.76□□□□□ -1.17
BEST1-201ENST00000378043 FN1P02751 2386 aaKnown RBP7.76□□□□□ -1.17
BEST1-201ENST00000378043 F5H768 121 aa7.76□□□□□ -1.17
BEST1-201ENST00000378043 CLEC2BQ92478 149 aa7.76□□□□□ -1.17
BEST1-201ENST00000378043 NBEAL2Q6ZNJ1 2754 aa7.76□□□□□ -1.17
BEST1-201ENST00000378043 TEX49A0A1B0GTD5 131 aa7.75□□□□□ -1.17
BEST1-201ENST00000378043 H7C423 109 aa7.75□□□□□ -1.17
BEST1-201ENST00000378043 PLA2G2AP14555 144 aa7.75□□□□□ -1.17
BEST1-201ENST00000378043 RPL13AP40429 203 aaKnown RBP7.75□□□□□ -1.17
BEST1-201ENST00000378043 SOSTDC1Q6X4U4 206 aa7.75□□□□□ -1.17
BEST1-201ENST00000378043 LINC00308Q8TCZ7 52 aa7.75□□□□□ -1.17
BEST1-201ENST00000378043 LOC100131303A0A0U1RQF7 123 aa7.75□□□□□ -1.17
BEST1-201ENST00000378043 A0A0U1RRA0 63 aa7.75□□□□□ -1.17
BEST1-201ENST00000378043 CSNK1G2-AS1Q8NCQ2 148 aa7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms