RNA–Protein interactions for RNA: ENST00000377142.4

NKX2-2-201, Transcript of NK2 homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NKX2-2, Length 2,092 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2-201ENST00000377142 J3QQQ9 107 aa12.4□□□□□ -0.42
NKX2-2-201ENST00000377142 TSPEAR-AS2P59090 65 aa12.4□□□□□ -0.42
NKX2-2-201ENST00000377142 CSDC2Q9Y534 153 aaKnown RBP12.4□□□□□ -0.42
NKX2-2-201ENST00000377142 LGALS3P17931 250 aaKnown RBP12.39□□□□□ -0.43
NKX2-2-201ENST00000377142 PTTG1IPP53801 180 aa12.39□□□□□ -0.43
NKX2-2-201ENST00000377142 SBSPONQ8IVN8 264 aa12.39□□□□□ -0.43
NKX2-2-201ENST00000377142 LOC100131303A0A0U1RQF7 123 aa12.38□□□□□ -0.43
NKX2-2-201ENST00000377142 DEFB130BP0DP73 79 aa12.38□□□□□ -0.43
NKX2-2-201ENST00000377142 DEFB130AP0DP74 79 aa12.38□□□□□ -0.43
NKX2-2-201ENST00000377142 DEFB135Q30KP9 77 aa12.38□□□□□ -0.43
NKX2-2-201ENST00000377142 KRTAP24-1Q3LI83 254 aa12.38□□□□□ -0.43
NKX2-2-201ENST00000377142 PLEKHB2Q96CS7 222 aa12.38□□□□□ -0.43
NKX2-2-201ENST00000377142 ATRQ13535 2644 aa12.38□□□□□ -0.43
NKX2-2-201ENST00000377142 LYRM9A8MSI8 78 aa12.38□□□□□ -0.43
NKX2-2-201ENST00000377142 UBE2D1P51668 147 aa12.38□□□□□ -0.43
NKX2-2-201ENST00000377142 VAMP3Q15836 100 aa12.38□□□□□ -0.43
NKX2-2-201ENST00000377142 SMIM13P0DJ93 91 aa12.37□□□□□ -0.43
NKX2-2-201ENST00000377142 LINC00694P0DN24 101 aa12.37□□□□□ -0.43
NKX2-2-201ENST00000377142 TMEM243Q9BU79 118 aa12.37□□□□□ -0.43
NKX2-2-201ENST00000377142 C9orf118A6NHY6 69 aa12.36□□□□□ -0.43
NKX2-2-201ENST00000377142 K7EP13 123 aa12.36□□□□□ -0.43
NKX2-2-201ENST00000377142 H7C423 109 aa12.36□□□□□ -0.43
NKX2-2-201ENST00000377142 UBE2L6O14933 153 aa12.36□□□□□ -0.43
NKX2-2-201ENST00000377142 UBE2V1Q13404 147 aa12.36□□□□□ -0.43
NKX2-2-201ENST00000377142 A0A0J9YY99 117 aa12.35□□□□□ -0.43
NKX2-2-201ENST00000377142 GEMIN7Q9H840 131 aaKnown RBP12.35□□□□□ -0.43
NKX2-2-201ENST00000377142 NHP2Q9NX24 153 aaKnown RBP12.34□□□□□ -0.43
NKX2-2-201ENST00000377142 TIRAPP58753 221 aa12.34□□□□□ -0.43
NKX2-2-201ENST00000377142 FAM222AQ5U5X8 452 aa12.34□□□□□ -0.43
NKX2-2-201ENST00000377142 OR5A1Q8NGJ0 315 aa12.34□□□□□ -0.43
NKX2-2-201ENST00000377142 SPANXB1Q9NS25 103 aaPredicted RBP12.34□□□□□ -0.43
NKX2-2-201ENST00000377142 IGHV3-64A0A075B6Q5 118 aa12.33□□□□□ -0.44
NKX2-2-201ENST00000377142 IGHV4-30-4P0DP06 118 aa12.33□□□□□ -0.44
NKX2-2-201ENST00000377142 AMMECR1LQ6DCA0 310 aa12.33□□□□□ -0.44
NKX2-2-201ENST00000377142 RAB37Q96AX2 223 aa12.33□□□□□ -0.44
NKX2-2-201ENST00000377142 IGLV5-45A0A087WSX0 123 aa12.33□□□□□ -0.44
NKX2-2-201ENST00000377142 IGHV1-58A0A0C4DH39 117 aa12.33□□□□□ -0.44
NKX2-2-201ENST00000377142 IGHV3-30-3P0DP02 117 aa12.33□□□□□ -0.44
NKX2-2-201ENST00000377142 SRSF9Q13242 221 aaKnown RBP eCLIP12.33□□□□□ -0.44
NKX2-2-201ENST00000377142 FAM19A3Q7Z5A8 133 aa12.33□□□□□ -0.44
NKX2-2-201ENST00000377142 TMEM101Q96IK0 257 aa12.33□□□□□ -0.44
NKX2-2-201ENST00000377142 MIFP14174 115 aa12.32□□□□□ -0.44
NKX2-2-201ENST00000377142 FLNBO75369 2602 aaKnown RBP12.32□□□□□ -0.44
NKX2-2-201ENST00000377142 IGHV4-28A0A0C4DH34 117 aa12.31□□□□□ -0.44
NKX2-2-201ENST00000377142 H3BUT2 72 aa12.31□□□□□ -0.44
NKX2-2-201ENST00000377142 HERVK_113P63121 156 aa12.31□□□□□ -0.44
NKX2-2-201ENST00000377142 CDC42SE2Q9NRR3 84 aa12.31□□□□□ -0.44
NKX2-2-201ENST00000377142 TRBV6-8A0A0A6YYG3 113 aa12.31□□□□□ -0.44
NKX2-2-201ENST00000377142 CCL25O15444 150 aa12.31□□□□□ -0.44
NKX2-2-201ENST00000377142 C3orf56Q8N813 242 aa12.31□□□□□ -0.44
NKX2-2-201ENST00000377142 PRO0255Q9UI72 69 aa12.31□□□□□ -0.44
NKX2-2-201ENST00000377142 K7ERJ3 54 aa12.3□□□□□ -0.44
NKX2-2-201ENST00000377142 SHISA2Q6UWI4 295 aa12.3□□□□□ -0.44
NKX2-2-201ENST00000377142 VSIG2Q96IQ7 327 aa12.3□□□□□ -0.44
NKX2-2-201ENST00000377142 TRAV8-3A0A0A6YYJ7 113 aa12.3□□□□□ -0.44
NKX2-2-201ENST00000377142 A0A1B0GWB2 263 aa12.3□□□□□ -0.44
NKX2-2-201ENST00000377142 Q8NAQ8 132 aa12.3□□□□□ -0.44
NKX2-2-201ENST00000377142 RNF183Q96D59 192 aa12.3□□□□□ -0.44
NKX2-2-201ENST00000377142 GYPEP15421 78 aa12.29□□□□□ -0.44
NKX2-2-201ENST00000377142 C12orf74Q32Q52 190 aa12.29□□□□□ -0.44
NKX2-2-201ENST00000377142 SPINK8P0C7L1 97 aa12.28□□□□□ -0.44
NKX2-2-201ENST00000377142 LINC00242Q5T6M2 205 aa12.28□□□□□ -0.44
NKX2-2-201ENST00000377142 CDKN2A-AS1Q9UH64 79 aa12.28□□□□□ -0.44
NKX2-2-201ENST00000377142 A0A1W2PPM0 123 aa12.27□□□□□ -0.45
NKX2-2-201ENST00000377142 DAD1P61803 113 aa12.27□□□□□ -0.45
NKX2-2-201ENST00000377142 ATP6V0E2Q8NHE4 81 aa12.27□□□□□ -0.45
NKX2-2-201ENST00000377142 DEFB4AO15263 64 aa12.26□□□□□ -0.45
NKX2-2-201ENST00000377142 C10orf126Q8N4M7 172 aa12.26□□□□□ -0.45
NKX2-2-201ENST00000377142 TRAV13-1A0A0B4J241 112 aa12.26□□□□□ -0.45
NKX2-2-201ENST00000377142 TMEM238C9JI98 176 aa12.26□□□□□ -0.45
NKX2-2-201ENST00000377142 IGHV3-30P01768 117 aa12.26□□□□□ -0.45
NKX2-2-201ENST00000377142 IGHV3-30-5P0DP03 117 aa12.26□□□□□ -0.45
NKX2-2-201ENST00000377142 GAGE6Q13070 117 aa12.26□□□□□ -0.45
NKX2-2-201ENST00000377142 SAMD5Q5TGI4 173 aa12.26□□□□□ -0.45
NKX2-2-201ENST00000377142 GTF2H5Q6ZYL4 71 aa12.26□□□□□ -0.45
NKX2-2-201ENST00000377142 NAA38Q9BRA0 125 aaKnown RBP12.26□□□□□ -0.45
NKX2-2-201ENST00000377142 CHCHD5Q9BSY4 110 aa12.26□□□□□ -0.45
NKX2-2-201ENST00000377142 COX6A2Q02221 97 aa12.25□□□□□ -0.45
NKX2-2-201ENST00000377142 NDUFA12Q9UI09 145 aa12.25□□□□□ -0.45
NKX2-2-201ENST00000377142 A0A0J9YXY3 114 aa12.25□□□□□ -0.45
NKX2-2-201ENST00000377142 GAGE10A6NGK3 116 aa12.25□□□□□ -0.45
NKX2-2-201ENST00000377142 PAX4O43316 350 aa12.25□□□□□ -0.45
NKX2-2-201ENST00000377142 EGFEM1PQ0D2K5 195 aa12.25□□□□□ -0.45
NKX2-2-201ENST00000377142 ZFAND6Q6FIF0 208 aa12.25□□□□□ -0.45
NKX2-2-201ENST00000377142 FABP2P12104 132 aa12.24□□□□□ -0.45
NKX2-2-201ENST00000377142 K7EP34 96 aa12.23□□□□□ -0.45
NKX2-2-201ENST00000377142 SPART-AS1P0CW21 52 aa12.23□□□□□ -0.45
NKX2-2-201ENST00000377142 KRTAP10-11P60412 298 aa12.23□□□□□ -0.45
NKX2-2-201ENST00000377142 TRRAPQ9Y4A5 3859 aa12.23□□□□□ -0.45
NKX2-2-201ENST00000377142 IGLV5-39A0A0G2JS06 123 aa12.23□□□□□ -0.45
NKX2-2-201ENST00000377142 A8MZ25 164 aa12.23□□□□□ -0.45
NKX2-2-201ENST00000377142 ATP5G1P05496 136 aa12.23□□□□□ -0.45
NKX2-2-201ENST00000377142 CELA1Q9UNI1 258 aa12.23□□□□□ -0.45
NKX2-2-201ENST00000377142 IGLL5B9A064 214 aa12.22□□□□□ -0.45
NKX2-2-201ENST00000377142 PRIMA1Q86XR5 153 aa12.22□□□□□ -0.45
NKX2-2-201ENST00000377142 TEX48A0A1B0GUV7 120 aa12.21□□□□□ -0.45
NKX2-2-201ENST00000377142 SPCS1Q9Y6A9 102 aa12.21□□□□□ -0.45
NKX2-2-201ENST00000377142 SMIM1B2RUZ4 78 aa12.2□□□□□ -0.46
NKX2-2-201ENST00000377142 NDUFA1O15239 70 aa12.2□□□□□ -0.46
NKX2-2-201ENST00000377142 IGLV4-60A0A075B6I1 120 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms