RNA–Protein interactions for RNA: ENST00000377047.8

GPC6-201, Transcript of glypican 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC6, Length 6,467 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6-201ENST00000377047 MBD6Q96DN6 1003 aa10.05□□□□□ -0.8
GPC6-201ENST00000377047 TMEM223A0PJW6 202 aa10.05□□□□□ -0.8
GPC6-201ENST00000377047 RBX1P62877 108 aa10.05□□□□□ -0.8
GPC6-201ENST00000377047 IGKV4-1P06312 121 aa10.05□□□□□ -0.8
GPC6-201ENST00000377047 ZNF22P17026 224 aaPredicted RBP10.05□□□□□ -0.8
GPC6-201ENST00000377047 SONP18583 2426 aaKnown RBP10.04□□□□□ -0.8
GPC6-201ENST00000377047 WNK1Q9H4A3 2382 aa10.04□□□□□ -0.8
GPC6-201ENST00000377047 LINC00526Q96FQ7 95 aa10.04□□□□□ -0.8
GPC6-201ENST00000377047 TANC2Q9HCD6 1990 aa10.04□□□□□ -0.8
GPC6-201ENST00000377047 UBE2D1P51668 147 aa10.04□□□□□ -0.8
GPC6-201ENST00000377047 H3BT86 120 aa10.04□□□□□ -0.8
GPC6-201ENST00000377047 DCANP1Q8TF63 244 aa10.04□□□□□ -0.8
GPC6-201ENST00000377047 LELP1Q5T871 98 aa10.03□□□□□ -0.8
GPC6-201ENST00000377047 IBA57-AS1B1ANH7 110 aa10.03□□□□□ -0.8
GPC6-201ENST00000377047 PDE6GP18545 87 aa10.03□□□□□ -0.8
GPC6-201ENST00000377047 PIK3CD-AS1Q5SR53 167 aa10.03□□□□□ -0.8
GPC6-201ENST00000377047 PRR9Q5T870 116 aa10.03□□□□□ -0.8
GPC6-201ENST00000377047 FAM236AA0A1B0GUQ0 79 aa10.02□□□□□ -0.8
GPC6-201ENST00000377047 FAM236BA0A1B0GV22 79 aa10.02□□□□□ -0.8
GPC6-201ENST00000377047 RNF185Q96GF1 192 aa10.02□□□□□ -0.8
GPC6-201ENST00000377047 IGKV2-28A0A075B6P5 120 aa10.02□□□□□ -0.81
GPC6-201ENST00000377047 IGKV2D-28P01615 120 aa10.02□□□□□ -0.81
GPC6-201ENST00000377047 HIVEP3Q5T1R4 2406 aa10.02□□□□□ -0.81
GPC6-201ENST00000377047 TAX1BP3O14907 124 aa10.02□□□□□ -0.81
GPC6-201ENST00000377047 DSCAML1Q8TD84 2053 aa10.02□□□□□ -0.81
GPC6-201ENST00000377047 RNASE3P12724 160 aaKnown RBP10.02□□□□□ -0.81
GPC6-201ENST00000377047 ATOX1O00244 68 aa10.01□□□□□ -0.81
GPC6-201ENST00000377047 BPY2O14599 106 aa10.01□□□□□ -0.81
GPC6-201ENST00000377047 SLPIP03973 132 aa10.01□□□□□ -0.81
GPC6-201ENST00000377047 LRP4O75096 1905 aa10.01□□□□□ -0.81
GPC6-201ENST00000377047 RETNQ9HD89 108 aa10.01□□□□□ -0.81
GPC6-201ENST00000377047 SPANXB1Q9NS25 103 aaPredicted RBP10.01□□□□□ -0.81
GPC6-201ENST00000377047 PTPRSQ13332 1948 aa10.01□□□□□ -0.81
GPC6-201ENST00000377047 EDN2P20800 178 aa10.01□□□□□ -0.81
GPC6-201ENST00000377047 TCL1BO95988 128 aa10□□□□□ -0.81
GPC6-201ENST00000377047 IGLV2-11P01706 119 aa10□□□□□ -0.81
GPC6-201ENST00000377047 CD164L2Q6UWJ8 174 aa10□□□□□ -0.81
GPC6-201ENST00000377047 C9orf85Q96MD7 179 aa10□□□□□ -0.81
GPC6-201ENST00000377047 SPATA12Q7Z6I5 190 aa10□□□□□ -0.81
GPC6-201ENST00000377047 FOXI1Q12951 378 aa10□□□□□ -0.81
GPC6-201ENST00000377047 PPDPFQ9H3Y8 114 aa10□□□□□ -0.81
GPC6-201ENST00000377047 LINC00308Q8TCZ7 52 aa10□□□□□ -0.81
GPC6-201ENST00000377047 TSHBP01222 138 aa9.99□□□□□ -0.81
GPC6-201ENST00000377047 CACNA1AO00555 2505 aa9.99□□□□□ -0.81
GPC6-201ENST00000377047 KLLNB2CW77 178 aa9.99□□□□□ -0.81
GPC6-201ENST00000377047 PTH2Q96A98 100 aa9.99□□□□□ -0.81
GPC6-201ENST00000377047 PRRC2AP48634 2157 aaKnown RBP9.99□□□□□ -0.81
GPC6-201ENST00000377047 C10orf142B7Z368 130 aa9.98□□□□□ -0.81
GPC6-201ENST00000377047 IGLV4-69A0A075B6H9 119 aa9.98□□□□□ -0.81
GPC6-201ENST00000377047 TRAV23DV6A0A075B6W5 121 aa9.98□□□□□ -0.81
GPC6-201ENST00000377047 ATRXP46100 2492 aa9.98□□□□□ -0.81
GPC6-201ENST00000377047 TRBV27A0A0K0K1C4 114 aa9.98□□□□□ -0.81
GPC6-201ENST00000377047 LINC00959A0A1B0GUT2 108 aa9.98□□□□□ -0.81
GPC6-201ENST00000377047 A8MZ25 164 aa9.98□□□□□ -0.81
GPC6-201ENST00000377047 C11orf21Q9P2W6 132 aa9.98□□□□□ -0.81
GPC6-201ENST00000377047 U3KQK5 164 aa9.97□□□□□ -0.81
GPC6-201ENST00000377047 LOC107984640A0A0U1RRK4 108 aa9.97□□□□□ -0.81
GPC6-201ENST00000377047 SEC61GP60059 68 aa9.97□□□□□ -0.81
GPC6-201ENST00000377047 TRBV6-5A0A0K0K1A5 114 aa9.97□□□□□ -0.81
GPC6-201ENST00000377047 MRGPRG-AS1Q2M3A8 158 aa9.97□□□□□ -0.81
GPC6-201ENST00000377047 HRCT1Q6UXD1 115 aa9.97□□□□□ -0.81
GPC6-201ENST00000377047 UPK3BQ9BT76 320 aa9.97□□□□□ -0.81
GPC6-201ENST00000377047 NUPR2A6NF83 97 aa9.96□□□□□ -0.81
GPC6-201ENST00000377047 B5MCH6 92 aa9.96□□□□□ -0.81
GPC6-201ENST00000377047 C6orf99Q4VX62 202 aa9.96□□□□□ -0.82
GPC6-201ENST00000377047 PYGO1Q9Y3Y4 419 aa9.96□□□□□ -0.82
GPC6-201ENST00000377047 RPL37AP8A6NKH3 93 aa9.96□□□□□ -0.82
GPC6-201ENST00000377047 CASC2Q6XLA1 102 aa9.95□□□□□ -0.82
GPC6-201ENST00000377047 SCXQ7RTU7 201 aa9.95□□□□□ -0.82
GPC6-201ENST00000377047 UBE2D4Q9Y2X8 147 aa9.95□□□□□ -0.82
GPC6-201ENST00000377047 BRI3O95415 125 aa9.95□□□□□ -0.82
GPC6-201ENST00000377047 SORL1Q92673 2214 aa9.95□□□□□ -0.82
GPC6-201ENST00000377047 A0A1W2PPR1 153 aa9.95□□□□□ -0.82
GPC6-201ENST00000377047 ZNF706Q9Y5V0 76 aaPredicted RBP9.95□□□□□ -0.82
GPC6-201ENST00000377047 ODF3L2Q3SX64 289 aa9.94□□□□□ -0.82
GPC6-201ENST00000377047 SMIM20Q8N5G0 67 aa9.94□□□□□ -0.82
GPC6-201ENST00000377047 SPINK6Q6UWN8 80 aa9.94□□□□□ -0.82
GPC6-201ENST00000377047 NRACQ8N912 160 aa9.94□□□□□ -0.82
GPC6-201ENST00000377047 RAI1Q7Z5J4 1906 aaPredicted RBP9.94□□□□□ -0.82
GPC6-201ENST00000377047 NAV2Q8IVL1 2488 aa9.94□□□□□ -0.82
GPC6-201ENST00000377047 C1orf158Q8N1D5 194 aa9.93□□□□□ -0.82
GPC6-201ENST00000377047 M0R378 163 aa9.93□□□□□ -0.82
GPC6-201ENST00000377047 MAPKAPK5-AS1Q8N8E1 139 aa9.93□□□□□ -0.82
GPC6-201ENST00000377047 NCOR2Q9Y618 2525 aa9.93□□□□□ -0.82
GPC6-201ENST00000377047 PLAC8L1A1L4L8 177 aa9.92□□□□□ -0.82
GPC6-201ENST00000377047 ARHGAP32A7KAX9 2087 aa9.92□□□□□ -0.82
GPC6-201ENST00000377047 IGLV1-51P01701 117 aa9.92□□□□□ -0.82
GPC6-201ENST00000377047 WFDC10BQ8IUB3 73 aa9.92□□□□□ -0.82
GPC6-201ENST00000377047 C16orf95Q9H693 158 aa9.91□□□□□ -0.82
GPC6-201ENST00000377047 UBE2D3P61077 147 aa9.91□□□□□ -0.82
GPC6-201ENST00000377047 UBE2D2P62837 147 aa9.91□□□□□ -0.82
GPC6-201ENST00000377047 SS18L2Q9UHA2 77 aa9.91□□□□□ -0.82
GPC6-201ENST00000377047 IGLV9-49A0A0B4J1Y8 123 aa9.91□□□□□ -0.82
GPC6-201ENST00000377047 LINC00474Q9P2X8 69 aa9.9□□□□□ -0.82
GPC6-201ENST00000377047 NAV3Q8IVL0 2385 aa9.9□□□□□ -0.82
GPC6-201ENST00000377047 HCFC1P51610 2035 aa9.9□□□□□ -0.82
GPC6-201ENST00000377047 IGF2RP11717 2491 aa9.9□□□□□ -0.82
GPC6-201ENST00000377047 TP73-AS1Q9UF72 201 aa9.9□□□□□ -0.82
GPC6-201ENST00000377047 C3orf84H3BNL1 204 aa9.9□□□□□ -0.83
GPC6-201ENST00000377047 TRIAP1O43715 76 aa9.9□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 7.1 ms