RNA–Protein interactions for RNA: ENST00000376806.9

HLA-A-202, Transcript of major histocompatibility complex, class I, A, humanhuman

BASIC

Gene HLA-A, Length 1,854 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-A-202ENST00000376806 IGHV4-30-4P0DP06 118 aa11.87□□□□□ -0.51
HLA-A-202ENST00000376806 GTSF1LQ9H1H1 148 aa11.87□□□□□ -0.51
HLA-A-202ENST00000376806 A6NDN8 102 aa11.87□□□□□ -0.51
HLA-A-202ENST00000376806 LINC00694P0DN24 101 aa11.87□□□□□ -0.51
HLA-A-202ENST00000376806 TSPEAR-AS2P59090 65 aa11.87□□□□□ -0.51
HLA-A-202ENST00000376806 LYRM9A8MSI8 78 aa11.86□□□□□ -0.51
HLA-A-202ENST00000376806 FAM222AQ5U5X8 452 aa11.86□□□□□ -0.51
HLA-A-202ENST00000376806 GCSHP23434 173 aa11.85□□□□□ -0.51
HLA-A-202ENST00000376806 DGAT2L7PQ6IED9 249 aa11.85□□□□□ -0.51
HLA-A-202ENST00000376806 IGHV4-28A0A0C4DH34 117 aa11.85□□□□□ -0.51
HLA-A-202ENST00000376806 TAL2Q16559 108 aa11.85□□□□□ -0.51
HLA-A-202ENST00000376806 OXLD1Q5BKU9 147 aa11.85□□□□□ -0.51
HLA-A-202ENST00000376806 TINCRA0A1B0GVN0 87 aa11.84□□□□□ -0.51
HLA-A-202ENST00000376806 LEPROTO15243 131 aa11.84□□□□□ -0.51
HLA-A-202ENST00000376806 TMEM243Q9BU79 118 aa11.84□□□□□ -0.51
HLA-A-202ENST00000376806 CSDC2Q9Y534 153 aaKnown RBP11.84□□□□□ -0.51
HLA-A-202ENST00000376806 J3QQQ9 107 aa11.83□□□□□ -0.52
HLA-A-202ENST00000376806 UBE2D1P51668 147 aa11.83□□□□□ -0.52
HLA-A-202ENST00000376806 FXYD2P54710 66 aa11.83□□□□□ -0.52
HLA-A-202ENST00000376806 SMAGPQ0VAQ4 97 aa11.83□□□□□ -0.52
HLA-A-202ENST00000376806 CEND1Q8N111 149 aa11.83□□□□□ -0.52
HLA-A-202ENST00000376806 PLEKHB2Q96CS7 222 aa11.83□□□□□ -0.52
HLA-A-202ENST00000376806 DNHD1Q96M86 4753 aa11.83□□□□□ -0.52
HLA-A-202ENST00000376806 MIFP14174 115 aa11.83□□□□□ -0.52
HLA-A-202ENST00000376806 Q8NAQ8 132 aa11.83□□□□□ -0.52
HLA-A-202ENST00000376806 TM2D2Q9BX73 214 aa11.83□□□□□ -0.52
HLA-A-202ENST00000376806 DEFB4AO15263 64 aa11.82□□□□□ -0.52
HLA-A-202ENST00000376806 LGALS3P17931 250 aaKnown RBP11.82□□□□□ -0.52
HLA-A-202ENST00000376806 SCGB1D4Q6XE38 83 aa11.82□□□□□ -0.52
HLA-A-202ENST00000376806 RNF183Q96D59 192 aa11.82□□□□□ -0.52
HLA-A-202ENST00000376806 HIST1H4GQ99525 98 aa11.82□□□□□ -0.52
HLA-A-202ENST00000376806 UBE2L6O14933 153 aa11.81□□□□□ -0.52
HLA-A-202ENST00000376806 KRTAP10-11P60412 298 aa11.81□□□□□ -0.52
HLA-A-202ENST00000376806 KRTAP21-3Q3LHN1 58 aa11.81□□□□□ -0.52
HLA-A-202ENST00000376806 IGHV3-64A0A075B6Q5 118 aa11.8□□□□□ -0.52
HLA-A-202ENST00000376806 K7EP13 123 aa11.8□□□□□ -0.52
HLA-A-202ENST00000376806 LINC00469Q8N7U9 141 aa11.8□□□□□ -0.52
HLA-A-202ENST00000376806 H3BRM9 83 aa11.8□□□□□ -0.52
HLA-A-202ENST00000376806 H7C423 109 aa11.8□□□□□ -0.52
HLA-A-202ENST00000376806 EGFEM1PQ0D2K5 195 aa11.8□□□□□ -0.52
HLA-A-202ENST00000376806 AMMECR1LQ6DCA0 310 aa11.8□□□□□ -0.52
HLA-A-202ENST00000376806 OR5A1Q8NGJ0 315 aa11.8□□□□□ -0.52
HLA-A-202ENST00000376806 GYPEP15421 78 aa11.79□□□□□ -0.52
HLA-A-202ENST00000376806 GEMIN7Q9H840 131 aaKnown RBP11.79□□□□□ -0.52
HLA-A-202ENST00000376806 PRO0255Q9UI72 69 aa11.79□□□□□ -0.52
HLA-A-202ENST00000376806 CMYA5Q8N3K9 4069 aa11.79□□□□□ -0.52
HLA-A-202ENST00000376806 TRBV6-8A0A0A6YYG3 113 aa11.78□□□□□ -0.52
HLA-A-202ENST00000376806 PTTG1IPP53801 180 aa11.78□□□□□ -0.52
HLA-A-202ENST00000376806 CDC42SE2Q9NRR3 84 aa11.78□□□□□ -0.52
HLA-A-202ENST00000376806 CELA1Q9UNI1 258 aa11.78□□□□□ -0.52
HLA-A-202ENST00000376806 NBEAL2Q6ZNJ1 2754 aa11.78□□□□□ -0.52
HLA-A-202ENST00000376806 IGLV5-45A0A087WSX0 123 aa11.78□□□□□ -0.52
HLA-A-202ENST00000376806 A0A0J9YY99 117 aa11.78□□□□□ -0.52
HLA-A-202ENST00000376806 IGHV3-30-3P0DP02 117 aa11.78□□□□□ -0.52
HLA-A-202ENST00000376806 TIRAPP58753 221 aa11.78□□□□□ -0.52
HLA-A-202ENST00000376806 DAD1P61803 113 aa11.78□□□□□ -0.52
HLA-A-202ENST00000376806 FAM19A3Q7Z5A8 133 aa11.78□□□□□ -0.52
HLA-A-202ENST00000376806 TRAV8-3A0A0A6YYJ7 113 aa11.77□□□□□ -0.53
HLA-A-202ENST00000376806 TMEM101Q96IK0 257 aa11.77□□□□□ -0.53
HLA-A-202ENST00000376806 IGHV1-58A0A0C4DH39 117 aa11.76□□□□□ -0.53
HLA-A-202ENST00000376806 ATP6V0E2Q8NHE4 81 aa11.76□□□□□ -0.53
HLA-A-202ENST00000376806 SPINK8P0C7L1 97 aa11.76□□□□□ -0.53
HLA-A-202ENST00000376806 GAGE6Q13070 117 aa11.76□□□□□ -0.53
HLA-A-202ENST00000376806 NHP2Q9NX24 153 aaKnown RBP11.76□□□□□ -0.53
HLA-A-202ENST00000376806 C9orf118A6NHY6 69 aa11.75□□□□□ -0.53
HLA-A-202ENST00000376806 A8MZ25 164 aa11.75□□□□□ -0.53
HLA-A-202ENST00000376806 SMIM13P0DJ93 91 aa11.75□□□□□ -0.53
HLA-A-202ENST00000376806 HERVK_113P63121 156 aa11.75□□□□□ -0.53
HLA-A-202ENST00000376806 LINC00242Q5T6M2 205 aa11.75□□□□□ -0.53
HLA-A-202ENST00000376806 VSIG2Q96IQ7 327 aa11.75□□□□□ -0.53
HLA-A-202ENST00000376806 SPANXB1Q9NS25 103 aaPredicted RBP11.75□□□□□ -0.53
HLA-A-202ENST00000376806 CDKN2A-AS1Q9UH64 79 aa11.75□□□□□ -0.53
HLA-A-202ENST00000376806 K7ERJ3 54 aa11.74□□□□□ -0.53
HLA-A-202ENST00000376806 PAX4O43316 350 aa11.74□□□□□ -0.53
HLA-A-202ENST00000376806 COX6A2Q02221 97 aa11.74□□□□□ -0.53
HLA-A-202ENST00000376806 VAMP3Q15836 100 aa11.74□□□□□ -0.53
HLA-A-202ENST00000376806 RAB37Q96AX2 223 aa11.74□□□□□ -0.53
HLA-A-202ENST00000376806 CHCHD5Q9BSY4 110 aa11.74□□□□□ -0.53
HLA-A-202ENST00000376806 TRAV13-1A0A0B4J241 112 aa11.74□□□□□ -0.53
HLA-A-202ENST00000376806 SPART-AS1P0CW21 52 aa11.74□□□□□ -0.53
HLA-A-202ENST00000376806 SRSF9Q13242 221 aaKnown RBP eCLIP11.74□□□□□ -0.53
HLA-A-202ENST00000376806 ATP5G1P05496 136 aa11.73□□□□□ -0.53
HLA-A-202ENST00000376806 MGAM2Q2M2H8 2515 aa11.73□□□□□ -0.53
HLA-A-202ENST00000376806 C10orf126Q8N4M7 172 aa11.72□□□□□ -0.53
HLA-A-202ENST00000376806 H3BUT2 72 aa11.72□□□□□ -0.53
HLA-A-202ENST00000376806 UBE2V1Q13404 147 aa11.72□□□□□ -0.53
HLA-A-202ENST00000376806 NAA38Q9BRA0 125 aaKnown RBP11.71□□□□□ -0.53
HLA-A-202ENST00000376806 IGLV4-60A0A075B6I1 120 aa11.7□□□□□ -0.54
HLA-A-202ENST00000376806 C12orf74Q32Q52 190 aa11.7□□□□□ -0.54
HLA-A-202ENST00000376806 RETNQ9HD89 108 aa11.7□□□□□ -0.54
HLA-A-202ENST00000376806 A0A096LPF7 62 aa11.7□□□□□ -0.54
HLA-A-202ENST00000376806 A0A0J9YXY3 114 aa11.7□□□□□ -0.54
HLA-A-202ENST00000376806 TMEM238LA0A1B0GVL6 79 aa11.7□□□□□ -0.54
HLA-A-202ENST00000376806 A0A1B0GWB2 263 aa11.7□□□□□ -0.54
HLA-A-202ENST00000376806 A6NJY4 79 aa11.7□□□□□ -0.54
HLA-A-202ENST00000376806 G3V4G9 280 aa11.7□□□□□ -0.54
HLA-A-202ENST00000376806 ZFAND6Q6FIF0 208 aa11.7□□□□□ -0.54
HLA-A-202ENST00000376806 NDUFA12Q9UI09 145 aa11.7□□□□□ -0.54
HLA-A-202ENST00000376806 IGLV5-39A0A0G2JS06 123 aa11.69□□□□□ -0.54
HLA-A-202ENST00000376806 TEX48A0A1B0GUV7 120 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms