RNA–Protein interactions for RNA: ENST00000376724.6

TRIM40-206, Transcript of tripartite motif containing 40, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TRIM40, Length 2,006 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-206ENST00000376724 IGLV4-69A0A075B6H9 119 aa9.15□□□□□ -0.94
TRIM40-206ENST00000376724 IGLV4-3A0A075B6K6 122 aa9.15□□□□□ -0.94
TRIM40-206ENST00000376724 UBE2D3P61077 147 aa9.15□□□□□ -0.94
TRIM40-206ENST00000376724 UBE2D2P62837 147 aa9.15□□□□□ -0.94
TRIM40-206ENST00000376724 RNASE13Q5GAN3 156 aaKnown RBP9.15□□□□□ -0.94
TRIM40-206ENST00000376724 NAA38Q9BRA0 125 aaKnown RBP9.15□□□□□ -0.94
TRIM40-206ENST00000376724 GTSF1LQ9H1H1 148 aa9.15□□□□□ -0.94
TRIM40-206ENST00000376724 VCX2Q9H322 139 aa9.15□□□□□ -0.94
TRIM40-206ENST00000376724 DAZ4Q86SG3 579 aaKnown RBP9.14□□□□□ -0.95
TRIM40-206ENST00000376724 DAZ3Q9NR90 486 aaKnown RBP9.14□□□□□ -0.95
TRIM40-206ENST00000376724 C11orf86A6NJI1 115 aa9.14□□□□□ -0.95
TRIM40-206ENST00000376724 FABP2P12104 132 aa9.14□□□□□ -0.95
TRIM40-206ENST00000376724 RPL24P83731 157 aaKnown RBP9.14□□□□□ -0.95
TRIM40-206ENST00000376724 EGFEM1PQ0D2K5 195 aa9.14□□□□□ -0.95
TRIM40-206ENST00000376724 LINC00612Q8N6U2 182 aa9.14□□□□□ -0.95
TRIM40-206ENST00000376724 RAB37Q96AX2 223 aa9.14□□□□□ -0.95
TRIM40-206ENST00000376724 RNF183Q96D59 192 aa9.14□□□□□ -0.95
TRIM40-206ENST00000376724 PRADC1Q9BSG0 188 aa9.14□□□□□ -0.95
TRIM40-206ENST00000376724 UBE2D4Q9Y2X8 147 aa9.14□□□□□ -0.95
TRIM40-206ENST00000376724 TEX48A0A1B0GUV7 120 aa9.13□□□□□ -0.95
TRIM40-206ENST00000376724 SMAGPQ0VAQ4 97 aa9.13□□□□□ -0.95
TRIM40-206ENST00000376724 NTM-AS1Q6ZSK4 140 aa9.13□□□□□ -0.95
TRIM40-206ENST00000376724 PYGO1Q9Y3Y4 419 aa9.13□□□□□ -0.95
TRIM40-206ENST00000376724 CMYA5Q8N3K9 4069 aa9.13□□□□□ -0.95
TRIM40-206ENST00000376724 LYRM9A8MSI8 78 aa9.12□□□□□ -0.95
TRIM40-206ENST00000376724 Q8NAQ8 132 aa9.12□□□□□ -0.95
TRIM40-206ENST00000376724 FAM104AQ969W3 186 aa9.12□□□□□ -0.95
TRIM40-206ENST00000376724 COL6A5A8TX70 2615 aa9.12□□□□□ -0.95
TRIM40-206ENST00000376724 GAGE12HA6NDE8 117 aa9.12□□□□□ -0.95
TRIM40-206ENST00000376724 MIFP14174 115 aa9.12□□□□□ -0.95
TRIM40-206ENST00000376724 PAPPA-AS1Q5QFB9 102 aa9.12□□□□□ -0.95
TRIM40-206ENST00000376724 TMEM170BQ5T4T1 132 aa9.12□□□□□ -0.95
TRIM40-206ENST00000376724 SAMD5Q5TGI4 173 aa9.12□□□□□ -0.95
TRIM40-206ENST00000376724 SMIM13P0DJ93 91 aa9.11□□□□□ -0.95
TRIM40-206ENST00000376724 SPANXA1Q9NS26 97 aa9.11□□□□□ -0.95
TRIM40-206ENST00000376724 CELA1Q9UNI1 258 aa9.11□□□□□ -0.95
TRIM40-206ENST00000376724 PKD1L1Q8TDX9 2849 aa9.11□□□□□ -0.95
TRIM40-206ENST00000376724 LINC00694P0DN24 101 aa9.1□□□□□ -0.95
TRIM40-206ENST00000376724 DAD1P61803 113 aa9.1□□□□□ -0.95
TRIM40-206ENST00000376724 DGAT2L7PQ6IED9 249 aa9.1□□□□□ -0.95
TRIM40-206ENST00000376724 Q6ZUT4 128 aa9.1□□□□□ -0.95
TRIM40-206ENST00000376724 SPATA25Q9BR10 227 aa9.1□□□□□ -0.95
TRIM40-206ENST00000376724 A0A0J9YXV3 536 aa9.1□□□□□ -0.95
TRIM40-206ENST00000376724 J3QR89 54 aa9.1□□□□□ -0.95
TRIM40-206ENST00000376724 CHAC1Q9BUX1 264 aa9.1□□□□□ -0.95
TRIM40-206ENST00000376724 RETNQ9HD89 108 aa9.1□□□□□ -0.95
TRIM40-206ENST00000376724 GYPEP15421 78 aa9.09□□□□□ -0.95
TRIM40-206ENST00000376724 CKS1BP61024 79 aa9.09□□□□□ -0.95
TRIM40-206ENST00000376724 MAPKAPK5-AS1Q8N8E1 139 aa9.09□□□□□ -0.95
TRIM40-206ENST00000376724 AMELXQ99217 191 aa9.09□□□□□ -0.95
TRIM40-206ENST00000376724 CRYBA4P53673 196 aa9.09□□□□□ -0.95
TRIM40-206ENST00000376724 UBE2L6O14933 153 aa9.08□□□□□ -0.96
TRIM40-206ENST00000376724 PRO0255Q9UI72 69 aa9.08□□□□□ -0.96
TRIM40-206ENST00000376724 TRBV25-1A0A075B6N4 114 aa9.07□□□□□ -0.96
TRIM40-206ENST00000376724 A0A096LPF7 62 aa9.07□□□□□ -0.96
TRIM40-206ENST00000376724 A0A0J9YY99 117 aa9.07□□□□□ -0.96
TRIM40-206ENST00000376724 E9PLD3 99 aa9.07□□□□□ -0.96
TRIM40-206ENST00000376724 F8W1H4 67 aa9.07□□□□□ -0.96
TRIM40-206ENST00000376724 SPART-AS1P0CW21 52 aa9.07□□□□□ -0.96
TRIM40-206ENST00000376724 HERVK_113P61574 105 aa9.07□□□□□ -0.96
TRIM40-206ENST00000376724 NFE4Q86UQ8 179 aa9.07□□□□□ -0.96
TRIM40-206ENST00000376724 TMEM243Q9BU79 118 aa9.07□□□□□ -0.96
TRIM40-206ENST00000376724 PAX4O43316 350 aa9.07□□□□□ -0.96
TRIM40-206ENST00000376724 PRB2P02812 416 aaPredicted RBP9.07□□□□□ -0.96
TRIM40-206ENST00000376724 HTN3P15516 51 aa9.07□□□□□ -0.96
TRIM40-206ENST00000376724 SBSPONQ8IVN8 264 aa9.07□□□□□ -0.96
TRIM40-206ENST00000376724 IGHV3-64A0A075B6Q5 118 aa9.06□□□□□ -0.96
TRIM40-206ENST00000376724 A8MZ25 164 aa9.06□□□□□ -0.96
TRIM40-206ENST00000376724 CFAP161Q6P656 301 aa9.06□□□□□ -0.96
TRIM40-206ENST00000376724 SPANXB1Q9NS25 103 aaPredicted RBP9.06□□□□□ -0.96
TRIM40-206ENST00000376724 TRAV26-1A0A087WT03 109 aa9.05□□□□□ -0.96
TRIM40-206ENST00000376724 ATP5G1P05496 136 aa9.05□□□□□ -0.96
TRIM40-206ENST00000376724 ZNF22P17026 224 aaPredicted RBP9.05□□□□□ -0.96
TRIM40-206ENST00000376724 ATP6V0E2Q8NHE4 81 aa9.05□□□□□ -0.96
TRIM40-206ENST00000376724 TIMM21Q9BVV7 248 aa9.05□□□□□ -0.96
TRIM40-206ENST00000376724 TRBV6-8A0A0A6YYG3 113 aa9.05□□□□□ -0.96
TRIM40-206ENST00000376724 F5H768 121 aa9.05□□□□□ -0.96
TRIM40-206ENST00000376724 MRPS36P82909 103 aaKnown RBP9.05□□□□□ -0.96
TRIM40-206ENST00000376724 GAGE6Q13070 117 aa9.05□□□□□ -0.96
TRIM40-206ENST00000376724 MTURNQ8N3F0 131 aa9.05□□□□□ -0.96
TRIM40-206ENST00000376724 HIGD1BQ9P298 99 aa9.05□□□□□ -0.96
TRIM40-206ENST00000376724 MYMXA0A1B0GTQ4 84 aa9.04□□□□□ -0.96
TRIM40-206ENST00000376724 CHCHD5Q9BSY4 110 aa9.04□□□□□ -0.96
TRIM40-206ENST00000376724 ANK2Q01484 3957 aa9.04□□□□□ -0.96
TRIM40-206ENST00000376724 ZNF815PA8K554 130 aa9.04□□□□□ -0.96
TRIM40-206ENST00000376724 WFDC2Q14508 124 aa9.04□□□□□ -0.96
TRIM40-206ENST00000376724 TMEM101Q96IK0 257 aa9.04□□□□□ -0.96
TRIM40-206ENST00000376724 MDFIQ99750 246 aa9.04□□□□□ -0.96
TRIM40-206ENST00000376724 TMEM223A0PJW6 202 aa9.03□□□□□ -0.96
TRIM40-206ENST00000376724 GCSHP23434 173 aa9.03□□□□□ -0.96
TRIM40-206ENST00000376724 UBE2D1P51668 147 aa9.03□□□□□ -0.96
TRIM40-206ENST00000376724 FXYD2P54710 66 aa9.03□□□□□ -0.96
TRIM40-206ENST00000376724 VSIG2Q96IQ7 327 aa9.03□□□□□ -0.96
TRIM40-206ENST00000376724 TRAV13-1A0A0B4J241 112 aa9.02□□□□□ -0.97
TRIM40-206ENST00000376724 TSPEAR-AS2P59090 65 aa9.02□□□□□ -0.97
TRIM40-206ENST00000376724 GEMIN7Q9H840 131 aaKnown RBP9.02□□□□□ -0.97
TRIM40-206ENST00000376724 CDC42SE2Q9NRR3 84 aa9.02□□□□□ -0.97
TRIM40-206ENST00000376724 CSDC2Q9Y534 153 aaKnown RBP9.02□□□□□ -0.97
TRIM40-206ENST00000376724 TINCRA0A1B0GVN0 87 aa9.02□□□□□ -0.97
TRIM40-206ENST00000376724 SCGB1D4Q6XE38 83 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms