RNA–Protein interactions for RNA: ENST00000376406.7

MDC1-201, Transcript of mediator of DNA damage checkpoint 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene MDC1, Length 7,576 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-201ENST00000376406 LINC00467Q9BRT7 94 aa8.18□□□□□ -1.1
MDC1-201ENST00000376406 TRBV6-4A0A1B0GX49 114 aa8.18□□□□□ -1.1
MDC1-201ENST00000376406 M0QY20 66 aa8.18□□□□□ -1.1
MDC1-201ENST00000376406 CFAP126Q5VTH2 177 aa8.18□□□□□ -1.1
MDC1-201ENST00000376406 ESM1Q9NQ30 184 aa8.18□□□□□ -1.1
MDC1-201ENST00000376406 C16orf95Q9H693 158 aa8.17□□□□□ -1.1
MDC1-201ENST00000376406 FASNP49327 2511 aaKnown RBP8.17□□□□□ -1.1
MDC1-201ENST00000376406 LECT2O14960 151 aa8.17□□□□□ -1.1
MDC1-201ENST00000376406 IGLV4-3A0A075B6K6 122 aa8.17□□□□□ -1.1
MDC1-201ENST00000376406 RS1O15537 224 aa8.17□□□□□ -1.1
MDC1-201ENST00000376406 MUC4Q99102 2169 aa8.17□□□□□ -1.1
MDC1-201ENST00000376406 C2CD3Q4AC94 2353 aa8.17□□□□□ -1.1
MDC1-201ENST00000376406 ZNF462Q96JM2 2506 aa8.17□□□□□ -1.1
MDC1-201ENST00000376406 DIRC1Q969H9 104 aa8.17□□□□□ -1.1
MDC1-201ENST00000376406 NRACQ8N912 160 aa8.17□□□□□ -1.1
MDC1-201ENST00000376406 PDE6GP18545 87 aa8.17□□□□□ -1.1
MDC1-201ENST00000376406 Q6ZTI0 123 aa8.16□□□□□ -1.1
MDC1-201ENST00000376406 FAM236AA0A1B0GUQ0 79 aa8.16□□□□□ -1.1
MDC1-201ENST00000376406 FAM236BA0A1B0GV22 79 aa8.16□□□□□ -1.1
MDC1-201ENST00000376406 BRI3O95415 125 aa8.16□□□□□ -1.1
MDC1-201ENST00000376406 IGLV1-40P01703 118 aa8.16□□□□□ -1.1
MDC1-201ENST00000376406 B5MCH6 92 aa8.16□□□□□ -1.1
MDC1-201ENST00000376406 HIST2H2BDQ6DRA6 164 aa8.15□□□□□ -1.1
MDC1-201ENST00000376406 TRBV6-5A0A0K0K1A5 114 aa8.15□□□□□ -1.1
MDC1-201ENST00000376406 NHLRC4P0CG21 123 aaPredicted RBP8.15□□□□□ -1.1
MDC1-201ENST00000376406 DEFB4AO15263 64 aa8.15□□□□□ -1.1
MDC1-201ENST00000376406 ZNF22P17026 224 aaPredicted RBP8.15□□□□□ -1.11
MDC1-201ENST00000376406 RBM3P98179 157 aaKnown RBP8.15□□□□□ -1.11
MDC1-201ENST00000376406 IGKV3D-7A0A0C4DH55 119 aa8.15□□□□□ -1.11
MDC1-201ENST00000376406 TRBV27A0A0K0K1C4 114 aa8.15□□□□□ -1.11
MDC1-201ENST00000376406 LINC00474Q9P2X8 69 aa8.15□□□□□ -1.11
MDC1-201ENST00000376406 SS18L2Q9UHA2 77 aa8.14□□□□□ -1.11
MDC1-201ENST00000376406 REG3AQ06141 175 aa8.14□□□□□ -1.11
MDC1-201ENST00000376406 PYGO1Q9Y3Y4 419 aa8.14□□□□□ -1.11
MDC1-201ENST00000376406 MRGPRG-AS1Q2M3A8 158 aa8.14□□□□□ -1.11
MDC1-201ENST00000376406 A0A1B0GX51 115 aa8.14□□□□□ -1.11
MDC1-201ENST00000376406 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.14□□□□□ -1.11
MDC1-201ENST00000376406 MAPKAPK5-AS1Q8N8E1 139 aa8.14□□□□□ -1.11
MDC1-201ENST00000376406 SMIM20Q8N5G0 67 aa8.13□□□□□ -1.11
MDC1-201ENST00000376406 MUC7Q8TAX7 377 aa8.13□□□□□ -1.11
MDC1-201ENST00000376406 TMEM258P61165 79 aa8.13□□□□□ -1.11
MDC1-201ENST00000376406 IGKV2D-26A0A0A0MRZ7 120 aa8.13□□□□□ -1.11
MDC1-201ENST00000376406 CNFNQ9BYD5 112 aa8.13□□□□□ -1.11
MDC1-201ENST00000376406 RNASE3P12724 160 aaKnown RBP8.13□□□□□ -1.11
MDC1-201ENST00000376406 KLLNB2CW77 178 aa8.12□□□□□ -1.11
MDC1-201ENST00000376406 NREPQ16612 68 aa8.12□□□□□ -1.11
MDC1-201ENST00000376406 LINC00269Q8N2A0 174 aa8.12□□□□□ -1.11
MDC1-201ENST00000376406 PTH2Q96A98 100 aa8.12□□□□□ -1.11
MDC1-201ENST00000376406 TP73-AS1Q9UF72 201 aa8.12□□□□□ -1.11
MDC1-201ENST00000376406 CRIP2P52943 208 aaPredicted RBP8.12□□□□□ -1.11
MDC1-201ENST00000376406 NDUFS5O43920 106 aa8.12□□□□□ -1.11
MDC1-201ENST00000376406 USP9YO00507 2555 aaPredicted RBP8.12□□□□□ -1.11
MDC1-201ENST00000376406 C2orf91Q6ZV80 131 aa8.11□□□□□ -1.11
MDC1-201ENST00000376406 TRBV6-8A0A0A6YYG3 113 aa8.11□□□□□ -1.11
MDC1-201ENST00000376406 TSHBP01222 138 aa8.11□□□□□ -1.11
MDC1-201ENST00000376406 TRBV30A0A0K0K1B3 111 aa8.11□□□□□ -1.11
MDC1-201ENST00000376406 COX7BP24311 80 aa8.11□□□□□ -1.11
MDC1-201ENST00000376406 LELP1Q5T871 98 aa8.11□□□□□ -1.11
MDC1-201ENST00000376406 CDKN2A-AS1Q9UH64 79 aa8.11□□□□□ -1.11
MDC1-201ENST00000376406 PRR9Q5T870 116 aa8.11□□□□□ -1.11
MDC1-201ENST00000376406 CHD8Q9HCK8 2581 aa8.11□□□□□ -1.11
MDC1-201ENST00000376406 TIMM17BO60830 172 aa8.11□□□□□ -1.11
MDC1-201ENST00000376406 LINC00643Q86TS7 51 aa8.11□□□□□ -1.11
MDC1-201ENST00000376406 C9orf85Q96MD7 179 aa8.11□□□□□ -1.11
MDC1-201ENST00000376406 IBA57-AS1B1ANH7 110 aa8.1□□□□□ -1.11
MDC1-201ENST00000376406 HIGD2BQ4VC39 106 aa8.1□□□□□ -1.11
MDC1-201ENST00000376406 MRPS12O15235 138 aaKnown RBP8.1□□□□□ -1.11
MDC1-201ENST00000376406 LINC00308Q8TCZ7 52 aa8.1□□□□□ -1.11
MDC1-201ENST00000376406 LINC00482Q8N8I6 264 aa8.1□□□□□ -1.11
MDC1-201ENST00000376406 KPRPQ5T749 579 aaPredicted RBP8.09□□□□□ -1.11
MDC1-201ENST00000376406 DCANP1Q8TF63 244 aa8.09□□□□□ -1.11
MDC1-201ENST00000376406 C14orf132Q9NPU4 83 aa8.09□□□□□ -1.11
MDC1-201ENST00000376406 CHCHD10Q8WYQ3 142 aaPredicted RBP8.09□□□□□ -1.11
MDC1-201ENST00000376406 FAM110AQ9BQ89 295 aa8.09□□□□□ -1.11
MDC1-201ENST00000376406 C11orf21Q9P2W6 132 aa8.09□□□□□ -1.11
MDC1-201ENST00000376406 ZNF706Q9Y5V0 76 aaPredicted RBP8.09□□□□□ -1.11
MDC1-201ENST00000376406 C10orf99Q6UWK7 81 aa8.09□□□□□ -1.11
MDC1-201ENST00000376406 IGHV4-28A0A0C4DH34 117 aa8.09□□□□□ -1.11
MDC1-201ENST00000376406 TEX49A0A1B0GTD5 131 aa8.08□□□□□ -1.12
MDC1-201ENST00000376406 CEP295Q9C0D2 2601 aa8.08□□□□□ -1.12
MDC1-201ENST00000376406 PROK1P58294 105 aa8.08□□□□□ -1.12
MDC1-201ENST00000376406 CHCHD7Q9BUK0 85 aa8.08□□□□□ -1.12
MDC1-201ENST00000376406 TRIAP1O43715 76 aa8.08□□□□□ -1.12
MDC1-201ENST00000376406 MRPS36P82909 103 aaKnown RBP8.07□□□□□ -1.12
MDC1-201ENST00000376406 CLUHP3Q96NS8 147 aa8.07□□□□□ -1.12
MDC1-201ENST00000376406 UBE2D4Q9Y2X8 147 aa8.07□□□□□ -1.12
MDC1-201ENST00000376406 Q8N976 141 aa8.07□□□□□ -1.12
MDC1-201ENST00000376406 POLR2KP53803 58 aaKnown RBP8.06□□□□□ -1.12
MDC1-201ENST00000376406 J3KT08 172 aa8.06□□□□□ -1.12
MDC1-201ENST00000376406 MP68P56378 58 aa8.06□□□□□ -1.12
MDC1-201ENST00000376406 IGHV4-30-4P0DP06 118 aa8.05□□□□□ -1.12
MDC1-201ENST00000376406 LINC00310P59036 64 aa8.05□□□□□ -1.12
MDC1-201ENST00000376406 IGLV1-51P01701 117 aa8.05□□□□□ -1.12
MDC1-201ENST00000376406 NDUFV3P56181 108 aaKnown RBP8.05□□□□□ -1.12
MDC1-201ENST00000376406 SETD2Q9BYW2 2564 aaPredicted RBP8.04□□□□□ -1.12
MDC1-201ENST00000376406 UBE2D1P51668 147 aa8.04□□□□□ -1.12
MDC1-201ENST00000376406 COX17Q14061 63 aa8.04□□□□□ -1.12
MDC1-201ENST00000376406 Q6ZS46 218 aa8.04□□□□□ -1.12
MDC1-201ENST00000376406 MT-ATP8P03928 68 aa8.04□□□□□ -1.12
MDC1-201ENST00000376406 CDSNQ15517 529 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms