RNA–Protein interactions for RNA: ENST00000376259.6

TNFRSF1B-201, Transcript of TNF receptor superfamily member 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF1B, Length 3,683 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-201ENST00000376259 ESM1Q9NQ30 184 aa10.59□□□□□ -0.71
TNFRSF1B-201ENST00000376259 TMEM223A0PJW6 202 aa10.59□□□□□ -0.71
TNFRSF1B-201ENST00000376259 TRIAP1O43715 76 aa10.59□□□□□ -0.71
TNFRSF1B-201ENST00000376259 MED14OSP0DP75 135 aa10.59□□□□□ -0.71
TNFRSF1B-201ENST00000376259 LINC00315P59091 139 aa10.59□□□□□ -0.71
TNFRSF1B-201ENST00000376259 PAX4O43316 350 aa10.58□□□□□ -0.72
TNFRSF1B-201ENST00000376259 IGSF10Q6WRI0 2623 aa10.58□□□□□ -0.72
TNFRSF1B-201ENST00000376259 LGALS9O00182 355 aa10.58□□□□□ -0.72
TNFRSF1B-201ENST00000376259 UBE2D1P51668 147 aa10.58□□□□□ -0.72
TNFRSF1B-201ENST00000376259 ICOSQ9Y6W8 199 aa10.58□□□□□ -0.72
TNFRSF1B-201ENST00000376259 NXPH4O95158 308 aa10.57□□□□□ -0.72
TNFRSF1B-201ENST00000376259 Q6ZSN1 163 aa10.57□□□□□ -0.72
TNFRSF1B-201ENST00000376259 C5orf38Q86SI9 138 aa10.57□□□□□ -0.72
TNFRSF1B-201ENST00000376259 WFDC10AQ9H1F0 79 aa10.57□□□□□ -0.72
TNFRSF1B-201ENST00000376259 YAE1D1Q9NRH1 226 aa10.57□□□□□ -0.72
TNFRSF1B-201ENST00000376259 KIF25-AS1Q9Y6Z4 181 aa10.57□□□□□ -0.72
TNFRSF1B-201ENST00000376259 IGLV1-40P01703 118 aa10.57□□□□□ -0.72
TNFRSF1B-201ENST00000376259 ELANEP08246 267 aa10.57□□□□□ -0.72
TNFRSF1B-201ENST00000376259 Q6ZTI0 123 aa10.57□□□□□ -0.72
TNFRSF1B-201ENST00000376259 GCN1Q92616 2671 aaKnown RBP10.57□□□□□ -0.72
TNFRSF1B-201ENST00000376259 ADAMTSL4-AS1Q5T5F5 129 aa10.56□□□□□ -0.72
TNFRSF1B-201ENST00000376259 GAGE2AQ6NT46 116 aa10.55□□□□□ -0.72
TNFRSF1B-201ENST00000376259 IGHV1-58A0A0C4DH39 117 aa10.55□□□□□ -0.72
TNFRSF1B-201ENST00000376259 KRTAP10-9P60411 292 aa10.55□□□□□ -0.72
TNFRSF1B-201ENST00000376259 RBMY1A1P0DJD3 496 aaKnown RBP10.55□□□□□ -0.72
TNFRSF1B-201ENST00000376259 RBMY1CP0DJD4 496 aa10.55□□□□□ -0.72
TNFRSF1B-201ENST00000376259 RBMY1FQ15415 496 aaKnown RBP10.55□□□□□ -0.72
TNFRSF1B-201ENST00000376259 POM121L12Q8N7R1 296 aa10.54□□□□□ -0.72
TNFRSF1B-201ENST00000376259 PIK3CD-AS1Q5SR53 167 aa10.54□□□□□ -0.72
TNFRSF1B-201ENST00000376259 C9orf85Q96MD7 179 aa10.54□□□□□ -0.72
TNFRSF1B-201ENST00000376259 Q9HAA7 133 aa10.54□□□□□ -0.72
TNFRSF1B-201ENST00000376259 FLNBO75369 2602 aaKnown RBP10.54□□□□□ -0.72
TNFRSF1B-201ENST00000376259 MAP6D1Q9H9H5 199 aa10.53□□□□□ -0.72
TNFRSF1B-201ENST00000376259 TRAV4A0A0B4J268 109 aa10.53□□□□□ -0.72
TNFRSF1B-201ENST00000376259 PRO0461Q9UI25 63 aa10.53□□□□□ -0.72
TNFRSF1B-201ENST00000376259 CRLF1O75462 422 aa10.52□□□□□ -0.72
TNFRSF1B-201ENST00000376259 GATA3P23771 443 aa10.52□□□□□ -0.72
TNFRSF1B-201ENST00000376259 PLA2G2AP14555 144 aa10.52□□□□□ -0.73
TNFRSF1B-201ENST00000376259 DEFB4AO15263 64 aa10.52□□□□□ -0.73
TNFRSF1B-201ENST00000376259 CRPP02741 224 aa10.52□□□□□ -0.73
TNFRSF1B-201ENST00000376259 PF4P02776 101 aa10.52□□□□□ -0.73
TNFRSF1B-201ENST00000376259 C6orf226Q5I0X4 101 aa10.52□□□□□ -0.73
TNFRSF1B-201ENST00000376259 SPATA25Q9BR10 227 aa10.52□□□□□ -0.73
TNFRSF1B-201ENST00000376259 VSIG2Q96IQ7 327 aa10.51□□□□□ -0.73
TNFRSF1B-201ENST00000376259 USP24Q9UPU5 2620 aa10.51□□□□□ -0.73
TNFRSF1B-201ENST00000376259 DSCR9P59020 149 aa10.51□□□□□ -0.73
TNFRSF1B-201ENST00000376259 LOC100131303A0A0U1RQF7 123 aa10.51□□□□□ -0.73
TNFRSF1B-201ENST00000376259 LINC01546A6NGU7 62 aa10.51□□□□□ -0.73
TNFRSF1B-201ENST00000376259 XCL1P47992 114 aa10.5□□□□□ -0.73
TNFRSF1B-201ENST00000376259 UBE2D3P61077 147 aa10.5□□□□□ -0.73
TNFRSF1B-201ENST00000376259 UBE2D2P62837 147 aa10.5□□□□□ -0.73
TNFRSF1B-201ENST00000376259 TRBV6-5A0A0K0K1A5 114 aa10.49□□□□□ -0.73
TNFRSF1B-201ENST00000376259 TMEM263Q8WUH6 116 aaKnown RBP10.49□□□□□ -0.73
TNFRSF1B-201ENST00000376259 IGLV10-54A0A075B6I4 117 aa10.49□□□□□ -0.73
TNFRSF1B-201ENST00000376259 CCL24O00175 119 aa10.49□□□□□ -0.73
TNFRSF1B-201ENST00000376259 CDIP1Q9H305 208 aa10.49□□□□□ -0.73
TNFRSF1B-201ENST00000376259 TINCRA0A1B0GVN0 87 aa10.49□□□□□ -0.73
TNFRSF1B-201ENST00000376259 SPANXA1Q9NS26 97 aa10.49□□□□□ -0.73
TNFRSF1B-201ENST00000376259 LINC00694P0DN24 101 aa10.48□□□□□ -0.73
TNFRSF1B-201ENST00000376259 IFITM1P13164 125 aa10.48□□□□□ -0.73
TNFRSF1B-201ENST00000376259 TMEM243Q9BU79 118 aa10.48□□□□□ -0.73
TNFRSF1B-201ENST00000376259 F8P00451 2351 aa10.48□□□□□ -0.73
TNFRSF1B-201ENST00000376259 ATP5G1P05496 136 aa10.48□□□□□ -0.73
TNFRSF1B-201ENST00000376259 TRBV10-2A0A0K0K1G8 114 aa10.48□□□□□ -0.73
TNFRSF1B-201ENST00000376259 CITED2Q99967 270 aaPredicted RBP10.48□□□□□ -0.73
TNFRSF1B-201ENST00000376259 COX6A2Q02221 97 aa10.47□□□□□ -0.73
TNFRSF1B-201ENST00000376259 ZNF702PQ9H963 129 aa10.47□□□□□ -0.73
TNFRSF1B-201ENST00000376259 RBMY1BA6NDE4 496 aaKnown RBP10.47□□□□□ -0.73
TNFRSF1B-201ENST00000376259 RBMY1EA6NEQ0 496 aaKnown RBP10.47□□□□□ -0.73
TNFRSF1B-201ENST00000376259 RBMY1DP0C7P1 496 aaKnown RBP10.47□□□□□ -0.73
TNFRSF1B-201ENST00000376259 MIAQ16674 131 aa10.47□□□□□ -0.73
TNFRSF1B-201ENST00000376259 BAALC-AS2P0C853 105 aa10.47□□□□□ -0.73
TNFRSF1B-201ENST00000376259 HERVK_113P63121 156 aa10.47□□□□□ -0.73
TNFRSF1B-201ENST00000376259 FHL3Q13643 280 aa10.47□□□□□ -0.73
TNFRSF1B-201ENST00000376259 PRORYQ9H606 182 aa10.47□□□□□ -0.73
TNFRSF1B-201ENST00000376259 ATRQ13535 2644 aa10.46□□□□□ -0.73
TNFRSF1B-201ENST00000376259 SCGB1A1P11684 91 aa10.46□□□□□ -0.74
TNFRSF1B-201ENST00000376259 MIR7-3HGQ8N6C7 128 aa10.46□□□□□ -0.74
TNFRSF1B-201ENST00000376259 EIF4EBP3O60516 100 aaPredicted RBP10.45□□□□□ -0.74
TNFRSF1B-201ENST00000376259 UBE2D4Q9Y2X8 147 aa10.45□□□□□ -0.74
TNFRSF1B-201ENST00000376259 A0A0B4J2C4 111 aa10.45□□□□□ -0.74
TNFRSF1B-201ENST00000376259 DEFB114Q30KQ6 69 aa10.45□□□□□ -0.74
TNFRSF1B-201ENST00000376259 ATP6V0E2Q8NHE4 81 aa10.45□□□□□ -0.74
TNFRSF1B-201ENST00000376259 WFDC11Q8NEX6 87 aa10.45□□□□□ -0.74
TNFRSF1B-201ENST00000376259 FAM19A4Q96LR4 140 aa10.44□□□□□ -0.74
TNFRSF1B-201ENST00000376259 K7EQD1 137 aa10.43□□□□□ -0.74
TNFRSF1B-201ENST00000376259 IGHV4-31P0DP07 118 aa10.43□□□□□ -0.74
TNFRSF1B-201ENST00000376259 HIST1H4AP62805 103 aaKnown RBP10.43□□□□□ -0.74
TNFRSF1B-201ENST00000376259 SMIM20Q8N5G0 67 aa10.43□□□□□ -0.74
TNFRSF1B-201ENST00000376259 SND1-IT1Q9HBX3 110 aa10.43□□□□□ -0.74
TNFRSF1B-201ENST00000376259 H7C423 109 aa10.42□□□□□ -0.74
TNFRSF1B-201ENST00000376259 Q6YL49 198 aa10.42□□□□□ -0.74
TNFRSF1B-201ENST00000376259 LINC00308Q8TCZ7 52 aa10.42□□□□□ -0.74
TNFRSF1B-201ENST00000376259 FAM236AA0A1B0GUQ0 79 aa10.42□□□□□ -0.74
TNFRSF1B-201ENST00000376259 FAM236BA0A1B0GV22 79 aa10.42□□□□□ -0.74
TNFRSF1B-201ENST00000376259 SLPIP03973 132 aa10.42□□□□□ -0.74
TNFRSF1B-201ENST00000376259 COPS9Q8WXC6 57 aa10.42□□□□□ -0.74
TNFRSF1B-201ENST00000376259 CHCHD7Q9BUK0 85 aa10.42□□□□□ -0.74
TNFRSF1B-201ENST00000376259 IGKV3D-7A0A0C4DH55 119 aa10.41□□□□□ -0.74
TNFRSF1B-201ENST00000376259 MALP21145 153 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms