RNA–Protein interactions for RNA: ENST00000376237.8

HLA-C-202, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,538 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-202ENST00000376237 K7EP13 123 aa15.6■□□□□ 0.09
HLA-C-202ENST00000376237 CDC42SE2Q9NRR3 84 aa15.6■□□□□ 0.09
HLA-C-202ENST00000376237 IGLV4-60A0A075B6I1 120 aa15.59■□□□□ 0.09
HLA-C-202ENST00000376237 FABP4P15090 132 aa15.59■□□□□ 0.09
HLA-C-202ENST00000376237 Q6ZN92 141 aa15.59■□□□□ 0.09
HLA-C-202ENST00000376237 ZNF664Q8N3J9 261 aa15.59■□□□□ 0.09
HLA-C-202ENST00000376237 STARD9Q9P2P6 4700 aa15.58■□□□□ 0.09
HLA-C-202ENST00000376237 IGLV4-3A0A075B6K6 122 aa15.58■□□□□ 0.09
HLA-C-202ENST00000376237 TRAV9-2A0A087WT02 112 aa15.58■□□□□ 0.08
HLA-C-202ENST00000376237 IGHV3-30P01768 117 aa15.58■□□□□ 0.08
HLA-C-202ENST00000376237 IGHV3-33P01772 117 aa15.58■□□□□ 0.08
HLA-C-202ENST00000376237 IGHV3-30-3P0DP02 117 aa15.58■□□□□ 0.08
HLA-C-202ENST00000376237 IGHV3-30-5P0DP03 117 aa15.58■□□□□ 0.08
HLA-C-202ENST00000376237 IFI27L1Q96BM0 104 aa15.58■□□□□ 0.08
HLA-C-202ENST00000376237 TENM2Q9NT68 2774 aa15.57■□□□□ 0.08
HLA-C-202ENST00000376237 ANGP03950 147 aaKnown RBP15.57■□□□□ 0.08
HLA-C-202ENST00000376237 HIST1H2BLQ99880 126 aa15.57■□□□□ 0.08
HLA-C-202ENST00000376237 Q6ZUT4 128 aa15.56■□□□□ 0.08
HLA-C-202ENST00000376237 Q8N3U1 123 aa15.56■□□□□ 0.08
HLA-C-202ENST00000376237 C10orf126Q8N4M7 172 aa15.56■□□□□ 0.08
HLA-C-202ENST00000376237 FAM104AQ969W3 186 aa15.56■□□□□ 0.08
HLA-C-202ENST00000376237 OPRPNQ99935 248 aaPredicted RBP15.56■□□□□ 0.08
HLA-C-202ENST00000376237 VCX2Q9H322 139 aa15.56■□□□□ 0.08
HLA-C-202ENST00000376237 TEX43Q6ZNM6 134 aa15.54■□□□□ 0.08
HLA-C-202ENST00000376237 LINC00173Q6ZV60 143 aa15.54■□□□□ 0.08
HLA-C-202ENST00000376237 BAALCQ8WXS3 180 aa15.53■□□□□ 0.08
HLA-C-202ENST00000376237 LINC00476Q8WZB0 136 aa15.53■□□□□ 0.08
HLA-C-202ENST00000376237 AMELXQ99217 191 aa15.53■□□□□ 0.08
HLA-C-202ENST00000376237 MAP1LC3CQ9BXW4 147 aa15.53■□□□□ 0.08
HLA-C-202ENST00000376237 KLK12Q9UKR0 248 aa15.53■□□□□ 0.08
HLA-C-202ENST00000376237 PRSS1P07477 247 aa15.53■□□□□ 0.08
HLA-C-202ENST00000376237 PMVKQ15126 192 aa15.53■□□□□ 0.08
HLA-C-202ENST00000376237 LINC00269Q8N2A0 174 aa15.53■□□□□ 0.08
HLA-C-202ENST00000376237 PLECQ15149 4684 aaKnown RBP15.52■□□□□ 0.08
HLA-C-202ENST00000376237 IFITM10A6NMD0 228 aa15.52■□□□□ 0.07
HLA-C-202ENST00000376237 LY6G6CO95867 125 aa15.52■□□□□ 0.07
HLA-C-202ENST00000376237 C2orf88Q9BSF0 95 aa15.52■□□□□ 0.07
HLA-C-202ENST00000376237 PRR34Q9NV39 138 aa15.52■□□□□ 0.07
HLA-C-202ENST00000376237 TTC32Q5I0X7 151 aa15.51■□□□□ 0.07
HLA-C-202ENST00000376237 REG3AQ06141 175 aa15.5■□□□□ 0.07
HLA-C-202ENST00000376237 RNASE13Q5GAN3 156 aaKnown RBP15.5■□□□□ 0.07
HLA-C-202ENST00000376237 TRAV12-1A0A0B4J245 112 aa15.49■□□□□ 0.07
HLA-C-202ENST00000376237 IBA57-AS1B1ANH7 110 aa15.49■□□□□ 0.07
HLA-C-202ENST00000376237 CRPP02741 224 aa15.49■□□□□ 0.07
HLA-C-202ENST00000376237 CST9LQ9H4G1 147 aa15.49■□□□□ 0.07
HLA-C-202ENST00000376237 CCL25O15444 150 aa15.48■□□□□ 0.07
HLA-C-202ENST00000376237 SPATA12Q7Z6I5 190 aa15.48■□□□□ 0.07
HLA-C-202ENST00000376237 UBE2WQ96B02 151 aa15.48■□□□□ 0.07
HLA-C-202ENST00000376237 PRSS29PA6NIE9 313 aa15.47■□□□□ 0.07
HLA-C-202ENST00000376237 SYS1-DBNDD2H3BUS1 97 aa15.47■□□□□ 0.07
HLA-C-202ENST00000376237 MIAQ16674 131 aa15.47■□□□□ 0.07
HLA-C-202ENST00000376237 ENHOQ6UWT2 76 aa15.47■□□□□ 0.07
HLA-C-202ENST00000376237 TRAV8-3A0A0A6YYJ7 113 aa15.46■□□□□ 0.07
HLA-C-202ENST00000376237 NBDYA0A0U1RRE5 68 aa15.46■□□□□ 0.07
HLA-C-202ENST00000376237 C3orf79P0CE67 100 aa15.46■□□□□ 0.07
HLA-C-202ENST00000376237 KRTDAPP60985 99 aa15.46■□□□□ 0.07
HLA-C-202ENST00000376237 ZC2HC1BQ5TFG8 222 aa15.46■□□□□ 0.07
HLA-C-202ENST00000376237 TRAV8-4A0A0B4J246 113 aa15.45■□□□□ 0.06
HLA-C-202ENST00000376237 SS18Q15532 418 aa15.45■□□□□ 0.06
HLA-C-202ENST00000376237 CLPSL2Q6UWE3 100 aa15.45■□□□□ 0.06
HLA-C-202ENST00000376237 PET117Q6UWS5 81 aa15.45■□□□□ 0.06
HLA-C-202ENST00000376237 TRAV13-1A0A0B4J241 112 aa15.44■□□□□ 0.06
HLA-C-202ENST00000376237 IGKV3OR2-268A0A0C4DH90 116 aa15.44■□□□□ 0.06
HLA-C-202ENST00000376237 LINC00959A0A1B0GUT2 108 aa15.44■□□□□ 0.06
HLA-C-202ENST00000376237 H0Y8G0 127 aa15.44■□□□□ 0.06
HLA-C-202ENST00000376237 UBE2D1P51668 147 aa15.44■□□□□ 0.06
HLA-C-202ENST00000376237 SEC11AP67812 179 aa15.43■□□□□ 0.06
HLA-C-202ENST00000376237 OR10D4PQ8NGN7 298 aa15.43■□□□□ 0.06
HLA-C-202ENST00000376237 FAM19A3Q7Z5A8 133 aa15.43■□□□□ 0.06
HLA-C-202ENST00000376237 CHTOPQ9Y3Y2 248 aaKnown RBP15.42■□□□□ 0.06
HLA-C-202ENST00000376237 F8VRH5 84 aa15.41■□□□□ 0.06
HLA-C-202ENST00000376237 ODF1Q14990 250 aa15.41■□□□□ 0.06
HLA-C-202ENST00000376237 KRTAP1-5Q9BYS1 174 aa15.41■□□□□ 0.06
HLA-C-202ENST00000376237 RMI2Q96E14 147 aa15.4■□□□□ 0.06
HLA-C-202ENST00000376237 C20orf202A1L168 122 aa15.39■□□□□ 0.05
HLA-C-202ENST00000376237 TINCRA0A1B0GVN0 87 aa15.38■□□□□ 0.05
HLA-C-202ENST00000376237 LINC00242Q5T6M2 205 aa15.38■□□□□ 0.05
HLA-C-202ENST00000376237 LINC01545Q5VT33 79 aa15.38■□□□□ 0.05
HLA-C-202ENST00000376237 C1orf43Q9BWL3 253 aa15.38■□□□□ 0.05
HLA-C-202ENST00000376237 MRPL35Q9NZE8 188 aaKnown RBP15.38■□□□□ 0.05
HLA-C-202ENST00000376237 A0A0J9YXV3 536 aa15.38■□□□□ 0.05
HLA-C-202ENST00000376237 AKR1D1P51857 326 aa15.38■□□□□ 0.05
HLA-C-202ENST00000376237 HERVK_113P63121 156 aa15.38■□□□□ 0.05
HLA-C-202ENST00000376237 Q6ZR54 194 aa15.38■□□□□ 0.05
HLA-C-202ENST00000376237 CHCHD10Q8WYQ3 142 aaPredicted RBP15.38■□□□□ 0.05
HLA-C-202ENST00000376237 Q9HAA7 133 aa15.38■□□□□ 0.05
HLA-C-202ENST00000376237 COX11Q9Y6N1 276 aa15.38■□□□□ 0.05
HLA-C-202ENST00000376237 LYSTQ99698 3801 aa15.37■□□□□ 0.05
HLA-C-202ENST00000376237 IGLV10-54A0A075B6I4 117 aa15.37■□□□□ 0.05
HLA-C-202ENST00000376237 LCE6AA0A183 80 aa15.37■□□□□ 0.05
HLA-C-202ENST00000376237 IGLC3P0DOY3 106 aa15.37■□□□□ 0.05
HLA-C-202ENST00000376237 NFE4Q86UQ8 179 aa15.37■□□□□ 0.05
HLA-C-202ENST00000376237 GEMIN7Q9H840 131 aaKnown RBP15.37■□□□□ 0.05
HLA-C-202ENST00000376237 IGLV4-69A0A075B6H9 119 aa15.36■□□□□ 0.05
HLA-C-202ENST00000376237 CD164L2Q6UWJ8 174 aa15.36■□□□□ 0.05
HLA-C-202ENST00000376237 M0R2N4 97 aa15.35■□□□□ 0.05
HLA-C-202ENST00000376237 PLNP26678 52 aa15.35■□□□□ 0.05
HLA-C-202ENST00000376237 XCL1P47992 114 aa15.35■□□□□ 0.05
HLA-C-202ENST00000376237 IGKV2D-24A0A075B6R9 120 aa15.34■□□□□ 0.05
HLA-C-202ENST00000376237 DPM2O94777 84 aa15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms