RNA–Protein interactions for RNA: ENST00000374747.9

NPLOC4-202, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 2 BASIC

Gene NPLOC4, Length 5,538 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-202ENST00000374747 IGKV2D-26A0A0A0MRZ7 120 aa9.31□□□□□ -0.92
NPLOC4-202ENST00000374747 DEFB1P60022 68 aa9.31□□□□□ -0.92
NPLOC4-202ENST00000374747 HIST2H2BDQ6DRA6 164 aa9.31□□□□□ -0.92
NPLOC4-202ENST00000374747 UPK3BQ9BT76 320 aa9.31□□□□□ -0.92
NPLOC4-202ENST00000374747 SPANXB1Q9NS25 103 aaPredicted RBP9.31□□□□□ -0.92
NPLOC4-202ENST00000374747 TRAV23DV6A0A075B6W5 121 aa9.31□□□□□ -0.92
NPLOC4-202ENST00000374747 TM2D2Q9BX73 214 aa9.3□□□□□ -0.92
NPLOC4-202ENST00000374747 ESM1Q9NQ30 184 aa9.3□□□□□ -0.92
NPLOC4-202ENST00000374747 GDF5OSQ5U4N7 250 aa9.3□□□□□ -0.92
NPLOC4-202ENST00000374747 SVIPQ8NHG7 77 aa9.3□□□□□ -0.92
NPLOC4-202ENST00000374747 TRBV10-1A0A0K0K1A3 114 aa9.3□□□□□ -0.92
NPLOC4-202ENST00000374747 A0A0J9YX75 114 aa9.3□□□□□ -0.92
NPLOC4-202ENST00000374747 LINC00322Q6ZN03 302 aaPredicted RBP9.3□□□□□ -0.92
NPLOC4-202ENST00000374747 FANCD2OSQ96PS1 177 aa9.3□□□□□ -0.92
NPLOC4-202ENST00000374747 UBE2AP49459 152 aa9.3□□□□□ -0.92
NPLOC4-202ENST00000374747 COX7BP24311 80 aa9.29□□□□□ -0.92
NPLOC4-202ENST00000374747 ZNF80P51504 273 aaPredicted RBP9.29□□□□□ -0.92
NPLOC4-202ENST00000374747 CSPG4Q6UVK1 2322 aa9.29□□□□□ -0.92
NPLOC4-202ENST00000374747 TEX49A0A1B0GTD5 131 aa9.29□□□□□ -0.92
NPLOC4-202ENST00000374747 CELSR1Q9NYQ6 3014 aa9.29□□□□□ -0.92
NPLOC4-202ENST00000374747 CEMP1Q6PRD7 247 aaPredicted RBP9.29□□□□□ -0.92
NPLOC4-202ENST00000374747 IGLC6P0CF74 106 aa9.28□□□□□ -0.92
NPLOC4-202ENST00000374747 FAM110AQ9BQ89 295 aa9.28□□□□□ -0.92
NPLOC4-202ENST00000374747 UNQ9165/PRO28630Q6UXU0 137 aa9.28□□□□□ -0.92
NPLOC4-202ENST00000374747 HIVEP2P31629 2446 aa9.28□□□□□ -0.92
NPLOC4-202ENST00000374747 ARHGAP32A7KAX9 2087 aa9.28□□□□□ -0.92
NPLOC4-202ENST00000374747 PTPN13Q12923 2485 aa9.28□□□□□ -0.92
NPLOC4-202ENST00000374747 C1orf229Q6ZS94 237 aaPredicted RBP9.28□□□□□ -0.92
NPLOC4-202ENST00000374747 C20orf197Q8N268 126 aa9.28□□□□□ -0.92
NPLOC4-202ENST00000374747 TMEM263Q8WUH6 116 aaKnown RBP9.28□□□□□ -0.92
NPLOC4-202ENST00000374747 MLST8Q9BVC4 326 aa9.28□□□□□ -0.92
NPLOC4-202ENST00000374747 NEXN-AS1Q8NBZ9 246 aa9.27□□□□□ -0.93
NPLOC4-202ENST00000374747 KLK12Q9UKR0 248 aa9.27□□□□□ -0.93
NPLOC4-202ENST00000374747 SETD2Q9BYW2 2564 aaPredicted RBP9.27□□□□□ -0.93
NPLOC4-202ENST00000374747 BPY2O14599 106 aa9.27□□□□□ -0.93
NPLOC4-202ENST00000374747 ZFYVE26Q68DK2 2539 aa9.27□□□□□ -0.93
NPLOC4-202ENST00000374747 LY6LH3BQJ8 138 aa9.27□□□□□ -0.93
NPLOC4-202ENST00000374747 EBI3Q14213 229 aa9.27□□□□□ -0.93
NPLOC4-202ENST00000374747 FAM236DA0A1B0GTK5 79 aa9.26□□□□□ -0.93
NPLOC4-202ENST00000374747 FAM236CP0DP71 79 aa9.26□□□□□ -0.93
NPLOC4-202ENST00000374747 ATP5EP2Q5VTU8 51 aa9.26□□□□□ -0.93
NPLOC4-202ENST00000374747 SDIM1Q6ZPB5 146 aa9.26□□□□□ -0.93
NPLOC4-202ENST00000374747 IGHV4-31P0DP07 118 aa9.26□□□□□ -0.93
NPLOC4-202ENST00000374747 MBD6Q96DN6 1003 aa9.26□□□□□ -0.93
NPLOC4-202ENST00000374747 PRO0255Q9UI72 69 aa9.25□□□□□ -0.93
NPLOC4-202ENST00000374747 NAV2Q8IVL1 2488 aa9.25□□□□□ -0.93
NPLOC4-202ENST00000374747 C4orf3Q8WVX3 66 aa9.25□□□□□ -0.93
NPLOC4-202ENST00000374747 TLN2Q9Y4G6 2542 aa9.25□□□□□ -0.93
NPLOC4-202ENST00000374747 H0Y9J4 135 aa9.25□□□□□ -0.93
NPLOC4-202ENST00000374747 C3orf22Q8N5N4 141 aa9.24□□□□□ -0.93
NPLOC4-202ENST00000374747 TP73-AS1Q9UF72 201 aa9.24□□□□□ -0.93
NPLOC4-202ENST00000374747 F8W735 103 aaPredicted RBP9.24□□□□□ -0.93
NPLOC4-202ENST00000374747 IGF1P05019 195 aa9.24□□□□□ -0.93
NPLOC4-202ENST00000374747 TNRC6BQ9UPQ9 1833 aaKnown RBP9.24□□□□□ -0.93
NPLOC4-202ENST00000374747 HIVEP3Q5T1R4 2406 aa9.24□□□□□ -0.93
NPLOC4-202ENST00000374747 MYO9AB2RTY4 2548 aa9.24□□□□□ -0.93
NPLOC4-202ENST00000374747 ZFAND2AQ8N6M9 145 aa9.24□□□□□ -0.93
NPLOC4-202ENST00000374747 UFSP1Q6NVU6 142 aa9.23□□□□□ -0.93
NPLOC4-202ENST00000374747 ODF3Q96PU9 254 aa9.23□□□□□ -0.93
NPLOC4-202ENST00000374747 CCDC140Q96MF4 163 aa9.23□□□□□ -0.93
NPLOC4-202ENST00000374747 TMEM223A0PJW6 202 aa9.23□□□□□ -0.93
NPLOC4-202ENST00000374747 P0DMU3 169 aa9.23□□□□□ -0.93
NPLOC4-202ENST00000374747 FAM231AP0DMU4 169 aa9.23□□□□□ -0.93
NPLOC4-202ENST00000374747 FAM231CP0DMU5 169 aa9.23□□□□□ -0.93
NPLOC4-202ENST00000374747 MYCNOSP40205 109 aa9.23□□□□□ -0.93
NPLOC4-202ENST00000374747 DEFB135Q30KP9 77 aa9.23□□□□□ -0.93
NPLOC4-202ENST00000374747 Q6YL49 198 aa9.23□□□□□ -0.93
NPLOC4-202ENST00000374747 CDSNQ15517 529 aa9.23□□□□□ -0.93
NPLOC4-202ENST00000374747 ZNF22P17026 224 aaPredicted RBP9.22□□□□□ -0.93
NPLOC4-202ENST00000374747 SEC61GP60059 68 aa9.22□□□□□ -0.93
NPLOC4-202ENST00000374747 SPTSSBQ8NFR3 76 aa9.22□□□□□ -0.93
NPLOC4-202ENST00000374747 MYO18BQ8IUG5 2567 aa9.22□□□□□ -0.93
NPLOC4-202ENST00000374747 DNAJC9-AS1A6NH13 148 aa9.22□□□□□ -0.93
NPLOC4-202ENST00000374747 RBX1P62877 108 aa9.22□□□□□ -0.93
NPLOC4-202ENST00000374747 TP53TG3Q9ULZ0 132 aa9.22□□□□□ -0.93
NPLOC4-202ENST00000374747 TRBV30A0A0K0K1B3 111 aa9.22□□□□□ -0.93
NPLOC4-202ENST00000374747 MAP6D1Q9H9H5 199 aa9.22□□□□□ -0.93
NPLOC4-202ENST00000374747 CDKN2A-AS1Q9UH64 79 aa9.22□□□□□ -0.93
NPLOC4-202ENST00000374747 TRIAP1O43715 76 aa9.21□□□□□ -0.93
NPLOC4-202ENST00000374747 MPLKIPQ8TAP9 179 aa9.21□□□□□ -0.93
NPLOC4-202ENST00000374747 WFDC11Q8NEX6 87 aa9.21□□□□□ -0.93
NPLOC4-202ENST00000374747 DSCAML1Q8TD84 2053 aa9.21□□□□□ -0.93
NPLOC4-202ENST00000374747 MAPKAPK5-AS1Q8N8E1 139 aa9.21□□□□□ -0.94
NPLOC4-202ENST00000374747 DEFB4AO15263 64 aa9.21□□□□□ -0.94
NPLOC4-202ENST00000374747 IGLV4-3A0A075B6K6 122 aa9.2□□□□□ -0.94
NPLOC4-202ENST00000374747 LINC01548A6NM66 108 aa9.2□□□□□ -0.94
NPLOC4-202ENST00000374747 LINC00308Q8TCZ7 52 aa9.2□□□□□ -0.94
NPLOC4-202ENST00000374747 USP9XQ93008 2570 aaPredicted RBP9.2□□□□□ -0.94
NPLOC4-202ENST00000374747 FAM240AA0A1B0GVK7 77 aa9.2□□□□□ -0.94
NPLOC4-202ENST00000374747 ENHOQ6UWT2 76 aa9.2□□□□□ -0.94
NPLOC4-202ENST00000374747 LINC00467Q9BRT7 94 aa9.2□□□□□ -0.94
NPLOC4-202ENST00000374747 PTPRBP23467 1997 aa9.2□□□□□ -0.94
NPLOC4-202ENST00000374747 NDUFC2-KCTD14E9PQ53 114 aa9.2□□□□□ -0.94
NPLOC4-202ENST00000374747 IGKV4-1P06312 121 aa9.19□□□□□ -0.94
NPLOC4-202ENST00000374747 U3KQK5 164 aa9.19□□□□□ -0.94
NPLOC4-202ENST00000374747 FLNCQ14315 2725 aa9.19□□□□□ -0.94
NPLOC4-202ENST00000374747 POLQO75417 2590 aa9.19□□□□□ -0.94
NPLOC4-202ENST00000374747 MRPL55Q7Z7F7 128 aaKnown RBP9.19□□□□□ -0.94
NPLOC4-202ENST00000374747 B9D2Q9BPU9 175 aa9.18□□□□□ -0.94
NPLOC4-202ENST00000374747 IBA57-AS1B1ANH7 110 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms