RNA–Protein interactions for RNA: ENST00000374199.8

PRPF4-202, Transcript of pre-mRNA processing factor 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PRPF4, Length 3,212 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-202ENST00000374199 PRIMA1Q86XR5 153 aa8.82□□□□□ -1
PRPF4-202ENST00000374199 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.82□□□□□ -1
PRPF4-202ENST00000374199 IGKV2-29A2NJV5 120 aaPredicted RBP8.82□□□□□ -1
PRPF4-202ENST00000374199 MIFP14174 115 aa8.81□□□□□ -1
PRPF4-202ENST00000374199 HERVK_113P61574 105 aa8.81□□□□□ -1
PRPF4-202ENST00000374199 CEMP1Q6PRD7 247 aaPredicted RBP8.81□□□□□ -1
PRPF4-202ENST00000374199 NOTCH2Q04721 2471 aa8.81□□□□□ -1
PRPF4-202ENST00000374199 KRTAP10-11P60412 298 aa8.81□□□□□ -1
PRPF4-202ENST00000374199 CDC42SE2Q9NRR3 84 aa8.81□□□□□ -1
PRPF4-202ENST00000374199 IGHV3-38A0A0C4DH36 116 aa8.8□□□□□ -1
PRPF4-202ENST00000374199 A0A0J9YXV3 536 aa8.8□□□□□ -1
PRPF4-202ENST00000374199 A0A0J9YY99 117 aa8.8□□□□□ -1
PRPF4-202ENST00000374199 SHISA2Q6UWI4 295 aa8.8□□□□□ -1
PRPF4-202ENST00000374199 IGLV5-39A0A0G2JS06 123 aa8.8□□□□□ -1
PRPF4-202ENST00000374199 IGHV4-30-4P0DP06 118 aa8.8□□□□□ -1
PRPF4-202ENST00000374199 TCTAP57738 103 aa8.8□□□□□ -1
PRPF4-202ENST00000374199 SETD2Q9BYW2 2564 aaPredicted RBP8.8□□□□□ -1
PRPF4-202ENST00000374199 TRGV2A0A075B6R0 118 aa8.79□□□□□ -1
PRPF4-202ENST00000374199 TRAV8-6A0A0B4J262 113 aa8.79□□□□□ -1
PRPF4-202ENST00000374199 FXYD2P54710 66 aa8.79□□□□□ -1
PRPF4-202ENST00000374199 LOC100131303A0A0U1RQF7 123 aa8.79□□□□□ -1
PRPF4-202ENST00000374199 A6NDN8 102 aa8.79□□□□□ -1
PRPF4-202ENST00000374199 J3QQQ9 107 aa8.79□□□□□ -1
PRPF4-202ENST00000374199 OCIAD2Q56VL3 154 aa8.79□□□□□ -1
PRPF4-202ENST00000374199 PLEKHB2Q96CS7 222 aa8.79□□□□□ -1
PRPF4-202ENST00000374199 JMJD1CQ15652 2540 aa8.79□□□□□ -1
PRPF4-202ENST00000374199 TRAV26-1A0A087WT03 109 aa8.78□□□□□ -1
PRPF4-202ENST00000374199 IGHV1-58A0A0C4DH39 117 aa8.78□□□□□ -1
PRPF4-202ENST00000374199 EMP1P54849 157 aa8.78□□□□□ -1
PRPF4-202ENST00000374199 SMAGPQ0VAQ4 97 aa8.78□□□□□ -1
PRPF4-202ENST00000374199 LITAFQ99732 161 aa8.78□□□□□ -1
PRPF4-202ENST00000374199 TRBV6-8A0A0A6YYG3 113 aa8.78□□□□□ -1
PRPF4-202ENST00000374199 VSIG2Q96IQ7 327 aa8.78□□□□□ -1
PRPF4-202ENST00000374199 IGHV4-28A0A0C4DH34 117 aa8.77□□□□□ -1.01
PRPF4-202ENST00000374199 GAGE12JA6NER3 117 aa8.77□□□□□ -1.01
PRPF4-202ENST00000374199 C9orf118A6NHY6 69 aa8.77□□□□□ -1.01
PRPF4-202ENST00000374199 GAGE4Q13068 117 aa8.77□□□□□ -1.01
PRPF4-202ENST00000374199 GAGE5Q13069 117 aa8.77□□□□□ -1.01
PRPF4-202ENST00000374199 GAGE13Q4V321 117 aa8.77□□□□□ -1.01
PRPF4-202ENST00000374199 LINC00242Q5T6M2 205 aa8.77□□□□□ -1.01
PRPF4-202ENST00000374199 ZNF815PA8K554 130 aa8.77□□□□□ -1.01
PRPF4-202ENST00000374199 F5H768 121 aa8.77□□□□□ -1.01
PRPF4-202ENST00000374199 IGHV3-30-3P0DP02 117 aa8.76□□□□□ -1.01
PRPF4-202ENST00000374199 FAM222AQ5U5X8 452 aa8.76□□□□□ -1.01
PRPF4-202ENST00000374199 TMEM243Q9BU79 118 aa8.76□□□□□ -1.01
PRPF4-202ENST00000374199 PPDPFQ9H3Y8 114 aa8.76□□□□□ -1.01
PRPF4-202ENST00000374199 TRGV4A0A0C4DH28 118 aa8.76□□□□□ -1.01
PRPF4-202ENST00000374199 IGHV3-30P01768 117 aa8.76□□□□□ -1.01
PRPF4-202ENST00000374199 IGHV3-30-5P0DP03 117 aa8.76□□□□□ -1.01
PRPF4-202ENST00000374199 TMEM170BQ5T4T1 132 aa8.76□□□□□ -1.01
PRPF4-202ENST00000374199 NAA38Q9BRA0 125 aaKnown RBP8.76□□□□□ -1.01
PRPF4-202ENST00000374199 PRO0255Q9UI72 69 aa8.76□□□□□ -1.01
PRPF4-202ENST00000374199 C10orf126Q8N4M7 172 aa8.75□□□□□ -1.01
PRPF4-202ENST00000374199 BAHCC1Q9P281 2608 aa8.75□□□□□ -1.01
PRPF4-202ENST00000374199 A0A1B0GUV1 79 aa8.75□□□□□ -1.01
PRPF4-202ENST00000374199 DEFB135Q30KP9 77 aa8.75□□□□□ -1.01
PRPF4-202ENST00000374199 ZFAND6Q6FIF0 208 aa8.75□□□□□ -1.01
PRPF4-202ENST00000374199 HERVK_113P63121 156 aa8.75□□□□□ -1.01
PRPF4-202ENST00000374199 F8P00451 2351 aa8.74□□□□□ -1.01
PRPF4-202ENST00000374199 COX6A2Q02221 97 aa8.74□□□□□ -1.01
PRPF4-202ENST00000374199 ATRQ13535 2644 aa8.74□□□□□ -1.01
PRPF4-202ENST00000374199 TIMM17BO60830 172 aa8.74□□□□□ -1.01
PRPF4-202ENST00000374199 C11orf68Q9H3H3 251 aaKnown RBP8.74□□□□□ -1.01
PRPF4-202ENST00000374199 CELA1Q9UNI1 258 aa8.73□□□□□ -1.01
PRPF4-202ENST00000374199 DNAH1Q9P2D7 4330 aa8.73□□□□□ -1.01
PRPF4-202ENST00000374199 TEX48A0A1B0GUV7 120 aa8.73□□□□□ -1.01
PRPF4-202ENST00000374199 SAMD5Q5TGI4 173 aa8.73□□□□□ -1.01
PRPF4-202ENST00000374199 SPANXDQ9BXN6 97 aa8.72□□□□□ -1.01
PRPF4-202ENST00000374199 SPANXCQ9NY87 97 aa8.72□□□□□ -1.01
PRPF4-202ENST00000374199 GAGE10A6NGK3 116 aa8.72□□□□□ -1.01
PRPF4-202ENST00000374199 RNASE13Q5GAN3 156 aaKnown RBP8.72□□□□□ -1.01
PRPF4-202ENST00000374199 CDKN2A-AS1Q9UH64 79 aa8.72□□□□□ -1.01
PRPF4-202ENST00000374199 HUWE1Q7Z6Z7 4374 aaKnown RBP8.72□□□□□ -1.01
PRPF4-202ENST00000374199 A0A0J9YXY3 114 aa8.71□□□□□ -1.01
PRPF4-202ENST00000374199 SMIM1B2RUZ4 78 aa8.71□□□□□ -1.01
PRPF4-202ENST00000374199 NDUFA1O15239 70 aa8.71□□□□□ -1.01
PRPF4-202ENST00000374199 SMIM13P0DJ93 91 aa8.71□□□□□ -1.01
PRPF4-202ENST00000374199 C12orf74Q32Q52 190 aa8.71□□□□□ -1.01
PRPF4-202ENST00000374199 DYNC2H1Q8NCM8 4307 aaKnown RBP8.71□□□□□ -1.01
PRPF4-202ENST00000374199 MAST4O15021 2626 aa8.71□□□□□ -1.01
PRPF4-202ENST00000374199 H3BNG1 76 aa8.71□□□□□ -1.02
PRPF4-202ENST00000374199 GCSHP23434 173 aa8.71□□□□□ -1.02
PRPF4-202ENST00000374199 TMEM101Q96IK0 257 aa8.71□□□□□ -1.02
PRPF4-202ENST00000374199 PKD1L1Q8TDX9 2849 aa8.71□□□□□ -1.02
PRPF4-202ENST00000374199 LGALS3P17931 250 aaKnown RBP8.71□□□□□ -1.02
PRPF4-202ENST00000374199 OXLD1Q5BKU9 147 aa8.71□□□□□ -1.02
PRPF4-202ENST00000374199 KPRPQ5T749 579 aaPredicted RBP8.71□□□□□ -1.02
PRPF4-202ENST00000374199 RAB37Q96AX2 223 aa8.71□□□□□ -1.02
PRPF4-202ENST00000374199 K7ERU9 68 aa8.7□□□□□ -1.02
PRPF4-202ENST00000374199 DEFB130BP0DP73 79 aa8.7□□□□□ -1.02
PRPF4-202ENST00000374199 DEFB130AP0DP74 79 aa8.7□□□□□ -1.02
PRPF4-202ENST00000374199 ATP6V0E2Q8NHE4 81 aa8.7□□□□□ -1.02
PRPF4-202ENST00000374199 HIST1H4GQ99525 98 aa8.7□□□□□ -1.02
PRPF4-202ENST00000374199 GYPEP15421 78 aa8.7□□□□□ -1.02
PRPF4-202ENST00000374199 LINC01561Q8N1V8 128 aa8.7□□□□□ -1.02
PRPF4-202ENST00000374199 ZNF625Q96I27 306 aaPredicted RBP8.7□□□□□ -1.02
PRPF4-202ENST00000374199 A0A1W2PPM0 123 aa8.69□□□□□ -1.02
PRPF4-202ENST00000374199 H3BUT2 72 aa8.69□□□□□ -1.02
PRPF4-202ENST00000374199 EIF4EBP3O60516 100 aaPredicted RBP8.69□□□□□ -1.02
PRPF4-202ENST00000374199 IGLV4-60A0A075B6I1 120 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms