RNA–Protein interactions for RNA: ENST00000374198.4

PRPF4-201, Transcript of pre-mRNA processing factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRPF4, Length 2,787 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-201ENST00000374198 IGKV3D-7A0A0C4DH55 119 aa9.43□□□□□ -0.9
PRPF4-201ENST00000374198 Q6JHZ5 121 aa9.43□□□□□ -0.9
PRPF4-201ENST00000374198 MINOS1-NBL1R4GNA1 71 aa9.43□□□□□ -0.9
PRPF4-201ENST00000374198 IGKV3-7A0A075B6H7 116 aa9.43□□□□□ -0.9
PRPF4-201ENST00000374198 MALP21145 153 aa9.43□□□□□ -0.9
PRPF4-201ENST00000374198 PRIMA1Q86XR5 153 aa9.42□□□□□ -0.9
PRPF4-201ENST00000374198 CENPEQ02224 2701 aa9.42□□□□□ -0.9
PRPF4-201ENST00000374198 UNC79Q9P2D8 2635 aa9.42□□□□□ -0.9
PRPF4-201ENST00000374198 SYNJ2BPP57105 145 aa9.42□□□□□ -0.9
PRPF4-201ENST00000374198 A0A087WVE0 104 aa9.41□□□□□ -0.9
PRPF4-201ENST00000374198 USP17L23D6RBM5 183 aa9.41□□□□□ -0.9
PRPF4-201ENST00000374198 DNAL4O96015 105 aa9.41□□□□□ -0.9
PRPF4-201ENST00000374198 LINC01561Q8N1V8 128 aa9.41□□□□□ -0.9
PRPF4-201ENST00000374198 NOTCH2Q04721 2471 aa9.41□□□□□ -0.9
PRPF4-201ENST00000374198 FBXL19-AS1Q494R0 122 aa9.41□□□□□ -0.9
PRPF4-201ENST00000374198 Q9HAA7 133 aa9.41□□□□□ -0.9
PRPF4-201ENST00000374198 SOSTDC1Q6X4U4 206 aa9.4□□□□□ -0.9
PRPF4-201ENST00000374198 CDKN2A-AS1Q9UH64 79 aa9.4□□□□□ -0.9
PRPF4-201ENST00000374198 NDUFA4O00483 81 aa9.4□□□□□ -0.91
PRPF4-201ENST00000374198 IGHG2P01859 326 aa9.4□□□□□ -0.91
PRPF4-201ENST00000374198 ZNF415Q09FC8 603 aa9.4□□□□□ -0.91
PRPF4-201ENST00000374198 COPS9Q8WXC6 57 aa9.4□□□□□ -0.91
PRPF4-201ENST00000374198 A0A0U1RRA0 63 aa9.39□□□□□ -0.91
PRPF4-201ENST00000374198 LINC01560Q8TB33 94 aa9.39□□□□□ -0.91
PRPF4-201ENST00000374198 C10orf105Q8TEF2 133 aa9.39□□□□□ -0.91
PRPF4-201ENST00000374198 LINC00846Q9NV44 126 aa9.39□□□□□ -0.91
PRPF4-201ENST00000374198 NACAE9PAV3 2078 aa9.39□□□□□ -0.91
PRPF4-201ENST00000374198 TRBV12-3P01733 135 aa9.39□□□□□ -0.91
PRPF4-201ENST00000374198 Q9H8V8 135 aa9.39□□□□□ -0.91
PRPF4-201ENST00000374198 NAV2Q8IVL1 2488 aa9.38□□□□□ -0.91
PRPF4-201ENST00000374198 FAM223BA6NKX1 122 aa9.38□□□□□ -0.91
PRPF4-201ENST00000374198 LY6HO94772 140 aa9.38□□□□□ -0.91
PRPF4-201ENST00000374198 FHL2Q14192 279 aa9.38□□□□□ -0.91
PRPF4-201ENST00000374198 FAM223AQ8IWN6 122 aa9.38□□□□□ -0.91
PRPF4-201ENST00000374198 UBE2D4Q9Y2X8 147 aa9.38□□□□□ -0.91
PRPF4-201ENST00000374198 ZNF625Q96I27 306 aaPredicted RBP9.38□□□□□ -0.91
PRPF4-201ENST00000374198 C14orf132Q9NPU4 83 aa9.38□□□□□ -0.91
PRPF4-201ENST00000374198 CRYBG3Q68DQ2 2970 aa9.37□□□□□ -0.91
PRPF4-201ENST00000374198 ANKHD1Q8IWZ3 2542 aaKnown RBP9.37□□□□□ -0.91
PRPF4-201ENST00000374198 NBPF19A0A087WUL8 3843 aa9.37□□□□□ -0.91
PRPF4-201ENST00000374198 ABCA12Q86UK0 2595 aa9.36□□□□□ -0.91
PRPF4-201ENST00000374198 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP9.36□□□□□ -0.91
PRPF4-201ENST00000374198 NDUFC2-KCTD14E9PQ53 114 aa9.36□□□□□ -0.91
PRPF4-201ENST00000374198 C9orf129Q5T035 196 aaKnown RBP9.36□□□□□ -0.91
PRPF4-201ENST00000374198 CELSR2Q9HCU4 2923 aa9.36□□□□□ -0.91
PRPF4-201ENST00000374198 IGLV5-45A0A087WSX0 123 aa9.36□□□□□ -0.91
PRPF4-201ENST00000374198 HOXD3P31249 432 aaPredicted RBP9.36□□□□□ -0.91
PRPF4-201ENST00000374198 HIST2H2BDQ6DRA6 164 aa9.36□□□□□ -0.91
PRPF4-201ENST00000374198 RHPN1-AS1Q9BWJ2 59 aa9.36□□□□□ -0.91
PRPF4-201ENST00000374198 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.35□□□□□ -0.91
PRPF4-201ENST00000374198 CHCHD7Q9BUK0 85 aa9.35□□□□□ -0.91
PRPF4-201ENST00000374198 ADGRG4Q8IZF6 3080 aa9.35□□□□□ -0.91
PRPF4-201ENST00000374198 TRAV12-2A0A075B6T6 113 aa9.35□□□□□ -0.91
PRPF4-201ENST00000374198 NDUFC2O95298 119 aa9.35□□□□□ -0.91
PRPF4-201ENST00000374198 KRTAP10-9P60411 292 aa9.35□□□□□ -0.91
PRPF4-201ENST00000374198 MAST4O15021 2626 aa9.35□□□□□ -0.91
PRPF4-201ENST00000374198 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.35□□□□□ -0.91
PRPF4-201ENST00000374198 IGHV1OR15-1A0A075B7D0 117 aa9.35□□□□□ -0.91
PRPF4-201ENST00000374198 IGKV2-29A2NJV5 120 aaPredicted RBP9.35□□□□□ -0.91
PRPF4-201ENST00000374198 PRO0628Q9UI54 55 aa9.35□□□□□ -0.91
PRPF4-201ENST00000374198 ITPR2Q14571 2701 aa9.35□□□□□ -0.91
PRPF4-201ENST00000374198 IGLV5-39A0A0G2JS06 123 aa9.34□□□□□ -0.91
PRPF4-201ENST00000374198 PFN2P35080 140 aa9.34□□□□□ -0.91
PRPF4-201ENST00000374198 RPL28P46779 137 aaKnown RBP9.34□□□□□ -0.91
PRPF4-201ENST00000374198 OBSCN-AS1Q96MR7 158 aa9.34□□□□□ -0.91
PRPF4-201ENST00000374198 IGHV3-73A0A0B4J1V6 119 aa9.33□□□□□ -0.92
PRPF4-201ENST00000374198 PROK1P58294 105 aa9.33□□□□□ -0.92
PRPF4-201ENST00000374198 C5orf56Q8N8D9 126 aa9.33□□□□□ -0.92
PRPF4-201ENST00000374198 COX6A2Q02221 97 aa9.33□□□□□ -0.92
PRPF4-201ENST00000374198 C19orf54Q5BKX5 351 aa9.33□□□□□ -0.92
PRPF4-201ENST00000374198 OVOL2Q9BRP0 275 aa9.33□□□□□ -0.92
PRPF4-201ENST00000374198 LINC00467Q9BRT7 94 aa9.32□□□□□ -0.92
PRPF4-201ENST00000374198 IGKV3-20P01619 116 aa9.31□□□□□ -0.92
PRPF4-201ENST00000374198 PF4P02776 101 aa9.31□□□□□ -0.92
PRPF4-201ENST00000374198 SIRPDQ9H106 197 aa9.31□□□□□ -0.92
PRPF4-201ENST00000374198 A0A087WYN8 130 aa9.31□□□□□ -0.92
PRPF4-201ENST00000374198 TRAV13-2A0A0B4J235 113 aa9.31□□□□□ -0.92
PRPF4-201ENST00000374198 ZFP36P26651 326 aaKnown RBP9.31□□□□□ -0.92
PRPF4-201ENST00000374198 LINC00336Q6ZUF6 198 aa9.31□□□□□ -0.92
PRPF4-201ENST00000374198 TMEM243Q9BU79 118 aa9.31□□□□□ -0.92
PRPF4-201ENST00000374198 CREBBPQ92793 2442 aa9.31□□□□□ -0.92
PRPF4-201ENST00000374198 GHRHP01286 108 aa9.3□□□□□ -0.92
PRPF4-201ENST00000374198 SAA4P35542 130 aa9.3□□□□□ -0.92
PRPF4-201ENST00000374198 PIK3CD-AS1Q5SR53 167 aa9.3□□□□□ -0.92
PRPF4-201ENST00000374198 Q9UF83 564 aa9.3□□□□□ -0.92
PRPF4-201ENST00000374198 EPM2AB3EWF7 344 aa9.3□□□□□ -0.92
PRPF4-201ENST00000374198 J3QLI3 93 aa9.3□□□□□ -0.92
PRPF4-201ENST00000374198 IGHV3-11P01762 117 aa9.3□□□□□ -0.92
PRPF4-201ENST00000374198 APCP25054 2843 aa9.3□□□□□ -0.92
PRPF4-201ENST00000374198 POLQO75417 2590 aa9.3□□□□□ -0.92
PRPF4-201ENST00000374198 MED13LQ71F56 2210 aa9.3□□□□□ -0.92
PRPF4-201ENST00000374198 FAM236DA0A1B0GTK5 79 aa9.29□□□□□ -0.92
PRPF4-201ENST00000374198 FAM236CP0DP71 79 aa9.29□□□□□ -0.92
PRPF4-201ENST00000374198 HILS1P60008 231 aa9.29□□□□□ -0.92
PRPF4-201ENST00000374198 SPG11Q96JI7 2443 aa9.29□□□□□ -0.92
PRPF4-201ENST00000374198 AKAP6Q13023 2319 aa9.29□□□□□ -0.92
PRPF4-201ENST00000374198 DCHS2Q6V1P9 2916 aa9.29□□□□□ -0.92
PRPF4-201ENST00000374198 CRPP02741 224 aa9.29□□□□□ -0.92
PRPF4-201ENST00000374198 PSMB8P28062 276 aa9.29□□□□□ -0.92
PRPF4-201ENST00000374198 FBN2P35556 2912 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 116.9 ms