RNA–Protein interactions for RNA: ENST00000373010.5

USP49-202, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 5 BASIC

Gene USP49, Length 2,446 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-202ENST00000373010 GAGE12IP0CL82 117 aa13.38□□□□□ -0.27
USP49-202ENST00000373010 GAGE4Q13068 117 aa13.38□□□□□ -0.27
USP49-202ENST00000373010 GAGE5Q13069 117 aa13.38□□□□□ -0.27
USP49-202ENST00000373010 DAZ2Q13117 558 aaKnown RBP13.38□□□□□ -0.27
USP49-202ENST00000373010 GAGE13Q4V321 117 aa13.38□□□□□ -0.27
USP49-202ENST00000373010 LINC00694P0DN24 101 aa13.37□□□□□ -0.27
USP49-202ENST00000373010 DGAT2L7PQ6IED9 249 aa13.37□□□□□ -0.27
USP49-202ENST00000373010 C16orf74Q96GX8 76 aa13.37□□□□□ -0.27
USP49-202ENST00000373010 A0A0J9YXY3 114 aa13.37□□□□□ -0.27
USP49-202ENST00000373010 NTM-AS1Q6ZSK4 140 aa13.37□□□□□ -0.27
USP49-202ENST00000373010 IGHV1-58A0A0C4DH39 117 aa13.36□□□□□ -0.27
USP49-202ENST00000373010 TRBV10-1A0A0K0K1A3 114 aa13.36□□□□□ -0.27
USP49-202ENST00000373010 MTURNQ8N3F0 131 aa13.36□□□□□ -0.27
USP49-202ENST00000373010 VPS25Q9BRG1 176 aa13.36□□□□□ -0.27
USP49-202ENST00000373010 WFDC2Q14508 124 aa13.35□□□□□ -0.27
USP49-202ENST00000373010 TRGV2A0A075B6R0 118 aa13.35□□□□□ -0.27
USP49-202ENST00000373010 VSIG2Q96IQ7 327 aa13.35□□□□□ -0.27
USP49-202ENST00000373010 C1QTNF4Q9BXJ3 329 aa13.35□□□□□ -0.27
USP49-202ENST00000373010 GEMIN7Q9H840 131 aaKnown RBP13.35□□□□□ -0.27
USP49-202ENST00000373010 NOTCH2Q04721 2471 aa13.34□□□□□ -0.27
USP49-202ENST00000373010 PF4P02776 101 aa13.34□□□□□ -0.27
USP49-202ENST00000373010 UBE2D3P61077 147 aa13.34□□□□□ -0.27
USP49-202ENST00000373010 UBE2D2P62837 147 aa13.34□□□□□ -0.27
USP49-202ENST00000373010 C2CD3Q4AC94 2353 aa13.34□□□□□ -0.27
USP49-202ENST00000373010 A4D1N5 150 aa13.34□□□□□ -0.27
USP49-202ENST00000373010 MUSTN1Q8IVN3 82 aa13.34□□□□□ -0.27
USP49-202ENST00000373010 LOC107984156A0A0G2JMH3 177 aa13.33□□□□□ -0.27
USP49-202ENST00000373010 RPL24P83731 157 aaKnown RBP13.33□□□□□ -0.27
USP49-202ENST00000373010 ARL17AQ8IVW1 177 aa13.33□□□□□ -0.27
USP49-202ENST00000373010 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.33□□□□□ -0.27
USP49-202ENST00000373010 CDKN2A-AS1Q9UH64 79 aa13.33□□□□□ -0.27
USP49-202ENST00000373010 LOC100131303A0A0U1RQF7 123 aa13.33□□□□□ -0.28
USP49-202ENST00000373010 DAZ4Q86SG3 579 aaKnown RBP13.33□□□□□ -0.28
USP49-202ENST00000373010 DAZ3Q9NR90 486 aaKnown RBP13.33□□□□□ -0.28
USP49-202ENST00000373010 NDUFA12Q9UI09 145 aa13.33□□□□□ -0.28
USP49-202ENST00000373010 TMEM238C9JI98 176 aa13.32□□□□□ -0.28
USP49-202ENST00000373010 EIF4EBP3O60516 100 aaPredicted RBP13.32□□□□□ -0.28
USP49-202ENST00000373010 COX6A2Q02221 97 aa13.32□□□□□ -0.28
USP49-202ENST00000373010 F8W1H4 67 aa13.32□□□□□ -0.28
USP49-202ENST00000373010 LINC00482Q8N8I6 264 aa13.32□□□□□ -0.28
USP49-202ENST00000373010 G3V4G9 280 aa13.31□□□□□ -0.28
USP49-202ENST00000373010 C21orf62-AS1Q17RA5 79 aa13.31□□□□□ -0.28
USP49-202ENST00000373010 LITAFQ99732 161 aa13.31□□□□□ -0.28
USP49-202ENST00000373010 OTOGQ6ZRI0 2925 aa13.31□□□□□ -0.28
USP49-202ENST00000373010 OVOL2Q9BRP0 275 aa13.31□□□□□ -0.28
USP49-202ENST00000373010 PRO0461Q9UI25 63 aa13.31□□□□□ -0.28
USP49-202ENST00000373010 FN1P02751 2386 aaKnown RBP13.31□□□□□ -0.28
USP49-202ENST00000373010 TEX48A0A1B0GUV7 120 aa13.3□□□□□ -0.28
USP49-202ENST00000373010 SBSPONQ8IVN8 264 aa13.3□□□□□ -0.28
USP49-202ENST00000373010 PRO1854Q9UHT4 67 aa13.3□□□□□ -0.28
USP49-202ENST00000373010 INAFM1C9JVW0 142 aa13.3□□□□□ -0.28
USP49-202ENST00000373010 TIRAPP58753 221 aa13.3□□□□□ -0.28
USP49-202ENST00000373010 PSMB2P49721 201 aa13.29□□□□□ -0.28
USP49-202ENST00000373010 ADAMTSL4-AS1Q5T5F5 129 aa13.29□□□□□ -0.28
USP49-202ENST00000373010 SPATA3Q8NHX4 192 aa13.29□□□□□ -0.28
USP49-202ENST00000373010 LINC00242Q5T6M2 205 aa13.29□□□□□ -0.28
USP49-202ENST00000373010 IGLV5-45A0A087WSX0 123 aa13.28□□□□□ -0.28
USP49-202ENST00000373010 TRGV4A0A0C4DH28 118 aa13.28□□□□□ -0.28
USP49-202ENST00000373010 SH2D6Q7Z4S9 175 aa13.28□□□□□ -0.28
USP49-202ENST00000373010 TMEM101Q96IK0 257 aa13.28□□□□□ -0.28
USP49-202ENST00000373010 TRAV13-1A0A0B4J241 112 aa13.27□□□□□ -0.29
USP49-202ENST00000373010 ZFAND6Q6FIF0 208 aa13.27□□□□□ -0.29
USP49-202ENST00000373010 PRSS2P07478 247 aa13.27□□□□□ -0.29
USP49-202ENST00000373010 ETDBQ3ZM63 59 aa13.27□□□□□ -0.29
USP49-202ENST00000373010 VWFP04275 2813 aa13.26□□□□□ -0.29
USP49-202ENST00000373010 TRBV6-4A0A1B0GX49 114 aa13.26□□□□□ -0.29
USP49-202ENST00000373010 CSDC2Q9Y534 153 aaKnown RBP13.26□□□□□ -0.29
USP49-202ENST00000373010 PCP4P48539 62 aa13.25□□□□□ -0.29
USP49-202ENST00000373010 TMEM243Q9BU79 118 aa13.25□□□□□ -0.29
USP49-202ENST00000373010 CDC42SE2Q9NRR3 84 aa13.25□□□□□ -0.29
USP49-202ENST00000373010 H7C2G1 150 aa13.25□□□□□ -0.29
USP49-202ENST00000373010 CRLF1O75462 422 aa13.25□□□□□ -0.29
USP49-202ENST00000373010 FHL2Q14192 279 aa13.25□□□□□ -0.29
USP49-202ENST00000373010 IGHV3-33P01772 117 aa13.24□□□□□ -0.29
USP49-202ENST00000373010 NPC2P61916 151 aa13.24□□□□□ -0.29
USP49-202ENST00000373010 HERVK_113P63121 156 aa13.24□□□□□ -0.29
USP49-202ENST00000373010 A0A0B4J2C4 111 aa13.24□□□□□ -0.29
USP49-202ENST00000373010 UBE2L6O14933 153 aa13.24□□□□□ -0.29
USP49-202ENST00000373010 TCL1BO95988 128 aa13.24□□□□□ -0.29
USP49-202ENST00000373010 GTSF1LQ9H1H1 148 aa13.24□□□□□ -0.29
USP49-202ENST00000373010 NSD1Q96L73 2696 aaPredicted RBP13.23□□□□□ -0.29
USP49-202ENST00000373010 DEFB130BP0DP73 79 aa13.23□□□□□ -0.29
USP49-202ENST00000373010 DEFB130AP0DP74 79 aa13.23□□□□□ -0.29
USP49-202ENST00000373010 SPANXDQ9BXN6 97 aa13.23□□□□□ -0.29
USP49-202ENST00000373010 SPANXCQ9NY87 97 aa13.23□□□□□ -0.29
USP49-202ENST00000373010 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.22□□□□□ -0.29
USP49-202ENST00000373010 SMCPP49901 116 aaPredicted RBP13.22□□□□□ -0.29
USP49-202ENST00000373010 CIDEAO60543 219 aa13.22□□□□□ -0.29
USP49-202ENST00000373010 SCGB1C2P0DMR2 95 aa13.22□□□□□ -0.29
USP49-202ENST00000373010 MIAQ16674 131 aa13.22□□□□□ -0.29
USP49-202ENST00000373010 LYRM7Q5U5X0 104 aa13.22□□□□□ -0.29
USP49-202ENST00000373010 FAM19A3Q7Z5A8 133 aa13.22□□□□□ -0.29
USP49-202ENST00000373010 ERG28Q9UKR5 140 aa13.22□□□□□ -0.29
USP49-202ENST00000373010 IGLV5-39A0A0G2JS06 123 aa13.21□□□□□ -0.29
USP49-202ENST00000373010 NDUFA1O15239 70 aa13.21□□□□□ -0.29
USP49-202ENST00000373010 DAND5Q8N907 189 aa13.21□□□□□ -0.3
USP49-202ENST00000373010 SMIM1B2RUZ4 78 aa13.2□□□□□ -0.3
USP49-202ENST00000373010 TENM1Q9UKZ4 2725 aa13.2□□□□□ -0.3
USP49-202ENST00000373010 GAGE6Q13070 117 aa13.2□□□□□ -0.3
USP49-202ENST00000373010 SMAGPQ0VAQ4 97 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms