RNA–Protein interactions for RNA: ENST00000372621.8

CTPS1-202, Transcript of CTP synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTPS1, Length 3,201 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS1-202ENST00000372621 TMEM262E9PQX1 116 aa9.15□□□□□ -0.94
CTPS1-202ENST00000372621 PRB1P04280 392 aa9.15□□□□□ -0.94
CTPS1-202ENST00000372621 Q6ZSV7 163 aa9.15□□□□□ -0.94
CTPS1-202ENST00000372621 FAM19A3Q7Z5A8 133 aa9.15□□□□□ -0.94
CTPS1-202ENST00000372621 XCL2Q9UBD3 114 aa9.15□□□□□ -0.94
CTPS1-202ENST00000372621 YAE1D1Q9NRH1 226 aa9.15□□□□□ -0.94
CTPS1-202ENST00000372621 ZNF462Q96JM2 2506 aa9.15□□□□□ -0.95
CTPS1-202ENST00000372621 IGLV5-39A0A0G2JS06 123 aa9.14□□□□□ -0.95
CTPS1-202ENST00000372621 IFITM1P13164 125 aa9.14□□□□□ -0.95
CTPS1-202ENST00000372621 RPL13AP40429 203 aaKnown RBP9.14□□□□□ -0.95
CTPS1-202ENST00000372621 LRRC75A-AS1Q8N1F1 130 aa9.14□□□□□ -0.95
CTPS1-202ENST00000372621 CHD6Q8TD26 2715 aa9.14□□□□□ -0.95
CTPS1-202ENST00000372621 NPC2P61916 151 aa9.14□□□□□ -0.95
CTPS1-202ENST00000372621 TRAV25A0A0B4J276 109 aa9.14□□□□□ -0.95
CTPS1-202ENST00000372621 LINC00242Q5T6M2 205 aa9.14□□□□□ -0.95
CTPS1-202ENST00000372621 KRTAP1-3Q8IUG1 177 aa9.14□□□□□ -0.95
CTPS1-202ENST00000372621 NTN5Q8WTR8 489 aaPredicted RBP9.14□□□□□ -0.95
CTPS1-202ENST00000372621 NAV2Q8IVL1 2488 aa9.13□□□□□ -0.95
CTPS1-202ENST00000372621 LINC00694P0DN24 101 aa9.13□□□□□ -0.95
CTPS1-202ENST00000372621 ABCA12Q86UK0 2595 aa9.13□□□□□ -0.95
CTPS1-202ENST00000372621 CUBNO60494 3623 aa9.13□□□□□ -0.95
CTPS1-202ENST00000372621 TMEM86BQ8N661 226 aa9.12□□□□□ -0.95
CTPS1-202ENST00000372621 Q96MF0 132 aa9.12□□□□□ -0.95
CTPS1-202ENST00000372621 CSDC2Q9Y534 153 aaKnown RBP9.12□□□□□ -0.95
CTPS1-202ENST00000372621 H7C423 109 aa9.12□□□□□ -0.95
CTPS1-202ENST00000372621 HERVK_113P63121 156 aa9.12□□□□□ -0.95
CTPS1-202ENST00000372621 DAND5Q8N907 189 aa9.12□□□□□ -0.95
CTPS1-202ENST00000372621 NBPF19A0A087WUL8 3843 aa9.12□□□□□ -0.95
CTPS1-202ENST00000372621 TEX49A0A1B0GTD5 131 aa9.12□□□□□ -0.95
CTPS1-202ENST00000372621 DGAT2L7PQ6IED9 249 aa9.12□□□□□ -0.95
CTPS1-202ENST00000372621 NTM-AS1Q6ZSK4 140 aa9.12□□□□□ -0.95
CTPS1-202ENST00000372621 STHQ8IWL8 128 aa9.12□□□□□ -0.95
CTPS1-202ENST00000372621 USP24Q9UPU5 2620 aa9.12□□□□□ -0.95
CTPS1-202ENST00000372621 ZFYVE26Q68DK2 2539 aa9.11□□□□□ -0.95
CTPS1-202ENST00000372621 TRGV1A0A0A0MS02 117 aa9.11□□□□□ -0.95
CTPS1-202ENST00000372621 BBC3Q96PG8 261 aaPredicted RBP9.11□□□□□ -0.95
CTPS1-202ENST00000372621 CITED2Q99967 270 aaPredicted RBP9.11□□□□□ -0.95
CTPS1-202ENST00000372621 TRBV10-1A0A0K0K1A3 114 aa9.11□□□□□ -0.95
CTPS1-202ENST00000372621 CITED1Q99966 193 aa9.11□□□□□ -0.95
CTPS1-202ENST00000372621 LST1O00453 97 aa9.1□□□□□ -0.95
CTPS1-202ENST00000372621 COX6CP09669 75 aa9.1□□□□□ -0.95
CTPS1-202ENST00000372621 K7EQD1 137 aa9.1□□□□□ -0.95
CTPS1-202ENST00000372621 NDUFA7O95182 113 aa9.1□□□□□ -0.95
CTPS1-202ENST00000372621 SMIM1B2RUZ4 78 aa9.1□□□□□ -0.95
CTPS1-202ENST00000372621 DAZ2Q13117 558 aaKnown RBP9.1□□□□□ -0.95
CTPS1-202ENST00000372621 Q6ZTI0 123 aa9.1□□□□□ -0.95
CTPS1-202ENST00000372621 DAZ4Q86SG3 579 aaKnown RBP9.1□□□□□ -0.95
CTPS1-202ENST00000372621 LINC00308Q8TCZ7 52 aa9.1□□□□□ -0.95
CTPS1-202ENST00000372621 CLEC2BQ92478 149 aa9.1□□□□□ -0.95
CTPS1-202ENST00000372621 DAZ3Q9NR90 486 aaKnown RBP9.1□□□□□ -0.95
CTPS1-202ENST00000372621 H3BT86 120 aa9.09□□□□□ -0.95
CTPS1-202ENST00000372621 Q9H8V8 135 aa9.09□□□□□ -0.95
CTPS1-202ENST00000372621 RPL36AP83881 106 aaKnown RBP9.09□□□□□ -0.95
CTPS1-202ENST00000372621 C2orf82Q6UX34 121 aa9.09□□□□□ -0.95
CTPS1-202ENST00000372621 RPL36ALQ969Q0 106 aaKnown RBP9.09□□□□□ -0.95
CTPS1-202ENST00000372621 EPG5Q9HCE0 2579 aa9.09□□□□□ -0.95
CTPS1-202ENST00000372621 TRAV4A0A0B4J268 109 aa9.09□□□□□ -0.96
CTPS1-202ENST00000372621 CIRBPQ14011 172 aaKnown RBP9.09□□□□□ -0.96
CTPS1-202ENST00000372621 UBE2WQ96B02 151 aa9.09□□□□□ -0.96
CTPS1-202ENST00000372621 CDC42SE2Q9NRR3 84 aa9.09□□□□□ -0.96
CTPS1-202ENST00000372621 F5H768 121 aa9.08□□□□□ -0.96
CTPS1-202ENST00000372621 WNK1Q9H4A3 2382 aa9.08□□□□□ -0.96
CTPS1-202ENST00000372621 APCP25054 2843 aa9.08□□□□□ -0.96
CTPS1-202ENST00000372621 ZNF625Q96I27 306 aaPredicted RBP9.08□□□□□ -0.96
CTPS1-202ENST00000372621 TLN2Q9Y4G6 2542 aa9.08□□□□□ -0.96
CTPS1-202ENST00000372621 DNAJC9-AS1A6NH13 148 aa9.07□□□□□ -0.96
CTPS1-202ENST00000372621 CCL24O00175 119 aa9.07□□□□□ -0.96
CTPS1-202ENST00000372621 GIG44P09565 113 aaPredicted RBP9.07□□□□□ -0.96
CTPS1-202ENST00000372621 NF1P21359 2839 aa9.07□□□□□ -0.96
CTPS1-202ENST00000372621 SOSTDC1Q6X4U4 206 aa9.07□□□□□ -0.96
CTPS1-202ENST00000372621 ZNF843Q8N446 348 aa9.07□□□□□ -0.96
CTPS1-202ENST00000372621 DEFB121Q5J5C9 76 aa9.06□□□□□ -0.96
CTPS1-202ENST00000372621 ITPR3Q14573 2671 aa9.06□□□□□ -0.96
CTPS1-202ENST00000372621 TRAV13-1A0A0B4J241 112 aa9.06□□□□□ -0.96
CTPS1-202ENST00000372621 A0A1W2PRX2 142 aa9.06□□□□□ -0.96
CTPS1-202ENST00000372621 PLAC8L1A1L4L8 177 aa9.06□□□□□ -0.96
CTPS1-202ENST00000372621 C11orf44Q8N8P7 122 aa9.06□□□□□ -0.96
CTPS1-202ENST00000372621 ESM1Q9NQ30 184 aa9.05□□□□□ -0.96
CTPS1-202ENST00000372621 TRAV8-4A0A0B4J246 113 aa9.05□□□□□ -0.96
CTPS1-202ENST00000372621 CRLF1O75462 422 aa9.05□□□□□ -0.96
CTPS1-202ENST00000372621 GAGE12JA6NER3 117 aa9.05□□□□□ -0.96
CTPS1-202ENST00000372621 GAGE4Q13068 117 aa9.05□□□□□ -0.96
CTPS1-202ENST00000372621 GAGE5Q13069 117 aa9.05□□□□□ -0.96
CTPS1-202ENST00000372621 SHISA2Q6UWI4 295 aa9.05□□□□□ -0.96
CTPS1-202ENST00000372621 NOP10Q9NPE3 64 aaKnown RBP9.05□□□□□ -0.96
CTPS1-202ENST00000372621 SETXQ7Z333 2677 aaKnown RBP9.04□□□□□ -0.96
CTPS1-202ENST00000372621 TEX29Q8N6K0 151 aa9.04□□□□□ -0.96
CTPS1-202ENST00000372621 PPDPFQ9H3Y8 114 aa9.04□□□□□ -0.96
CTPS1-202ENST00000372621 SONP18583 2426 aaKnown RBP9.04□□□□□ -0.96
CTPS1-202ENST00000372621 TRAV26-1A0A087WT03 109 aa9.03□□□□□ -0.96
CTPS1-202ENST00000372621 COPS9Q8WXC6 57 aa9.03□□□□□ -0.96
CTPS1-202ENST00000372621 A0A0U1RRA0 63 aa9.03□□□□□ -0.96
CTPS1-202ENST00000372621 HERV-K104P63124 156 aa9.03□□□□□ -0.96
CTPS1-202ENST00000372621 PRIMA1Q86XR5 153 aa9.03□□□□□ -0.96
CTPS1-202ENST00000372621 NIPBLQ6KC79 2804 aaeCLIP9.03□□□□□ -0.96
CTPS1-202ENST00000372621 COX7A2LO14548 114 aa9.02□□□□□ -0.97
CTPS1-202ENST00000372621 SNCGO76070 127 aa9.02□□□□□ -0.97
CTPS1-202ENST00000372621 C16orf74Q96GX8 76 aa9.02□□□□□ -0.97
CTPS1-202ENST00000372621 NOTCH3Q9UM47 2321 aa9.01□□□□□ -0.97
CTPS1-202ENST00000372621 FAM240AA0A1B0GVK7 77 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms