RNA–Protein interactions for RNA: ENST00000372243.7

TMEM53-204, Transcript of transmembrane protein 53, humanhuman

TSL 2 BASIC

Gene TMEM53, Length 1,579 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-204ENST00000372243 Q8N976 141 aa10.77□□□□□ -0.69
TMEM53-204ENST00000372243 CDC42SE2Q9NRR3 84 aa10.77□□□□□ -0.69
TMEM53-204ENST00000372243 IGLV4-60A0A075B6I1 120 aa10.76□□□□□ -0.69
TMEM53-204ENST00000372243 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.76□□□□□ -0.69
TMEM53-204ENST00000372243 LINC00476Q8WZB0 136 aa10.76□□□□□ -0.69
TMEM53-204ENST00000372243 FAM104AQ969W3 186 aa10.76□□□□□ -0.69
TMEM53-204ENST00000372243 IGLV4-3A0A075B6K6 122 aa10.75□□□□□ -0.69
TMEM53-204ENST00000372243 PAPPA-AS1Q5QFB9 102 aa10.75□□□□□ -0.69
TMEM53-204ENST00000372243 ZNF664Q8N3J9 261 aa10.75□□□□□ -0.69
TMEM53-204ENST00000372243 Q8N3U1 123 aa10.75□□□□□ -0.69
TMEM53-204ENST00000372243 HSPB8Q9UJY1 196 aa10.75□□□□□ -0.69
TMEM53-204ENST00000372243 DNAH1Q9P2D7 4330 aa10.75□□□□□ -0.69
TMEM53-204ENST00000372243 IGHV3-30P01768 117 aa10.74□□□□□ -0.69
TMEM53-204ENST00000372243 IGHV3-33P01772 117 aa10.74□□□□□ -0.69
TMEM53-204ENST00000372243 IGHV3-30-3P0DP02 117 aa10.74□□□□□ -0.69
TMEM53-204ENST00000372243 IGHV3-30-5P0DP03 117 aa10.74□□□□□ -0.69
TMEM53-204ENST00000372243 TRAV9-2A0A087WT02 112 aa10.73□□□□□ -0.69
TMEM53-204ENST00000372243 ANGP03950 147 aaKnown RBP10.73□□□□□ -0.69
TMEM53-204ENST00000372243 S100A2P29034 98 aa10.73□□□□□ -0.69
TMEM53-204ENST00000372243 Q6ZN92 141 aa10.73□□□□□ -0.69
TMEM53-204ENST00000372243 Q6ZUT4 128 aa10.73□□□□□ -0.69
TMEM53-204ENST00000372243 C10orf126Q8N4M7 172 aa10.73□□□□□ -0.69
TMEM53-204ENST00000372243 ALMS1Q8TCU4 4167 aa10.73□□□□□ -0.69
TMEM53-204ENST00000372243 FABP4P15090 132 aa10.73□□□□□ -0.69
TMEM53-204ENST00000372243 IFI27L1Q96BM0 104 aa10.73□□□□□ -0.69
TMEM53-204ENST00000372243 OPRPNQ99935 248 aaPredicted RBP10.73□□□□□ -0.69
TMEM53-204ENST00000372243 AMELXQ99217 191 aa10.72□□□□□ -0.69
TMEM53-204ENST00000372243 HIST1H2BLQ99880 126 aa10.72□□□□□ -0.69
TMEM53-204ENST00000372243 PRR34Q9NV39 138 aa10.72□□□□□ -0.69
TMEM53-204ENST00000372243 KLK12Q9UKR0 248 aa10.72□□□□□ -0.69
TMEM53-204ENST00000372243 LY6G6CO95867 125 aa10.71□□□□□ -0.69
TMEM53-204ENST00000372243 TTC32Q5I0X7 151 aa10.71□□□□□ -0.69
TMEM53-204ENST00000372243 TEX43Q6ZNM6 134 aa10.71□□□□□ -0.69
TMEM53-204ENST00000372243 LINC00173Q6ZV60 143 aa10.71□□□□□ -0.69
TMEM53-204ENST00000372243 LINC00269Q8N2A0 174 aa10.71□□□□□ -0.69
TMEM53-204ENST00000372243 BAALCQ8WXS3 180 aa10.71□□□□□ -0.69
TMEM53-204ENST00000372243 VCX2Q9H322 139 aa10.71□□□□□ -0.69
TMEM53-204ENST00000372243 IBA57-AS1B1ANH7 110 aa10.7□□□□□ -0.7
TMEM53-204ENST00000372243 REG3AQ06141 175 aa10.7□□□□□ -0.7
TMEM53-204ENST00000372243 NBDYA0A0U1RRE5 68 aa10.69□□□□□ -0.7
TMEM53-204ENST00000372243 IFITM10A6NMD0 228 aa10.69□□□□□ -0.7
TMEM53-204ENST00000372243 PMVKQ15126 192 aa10.69□□□□□ -0.7
TMEM53-204ENST00000372243 CCL25O15444 150 aa10.69□□□□□ -0.7
TMEM53-204ENST00000372243 CRPP02741 224 aa10.69□□□□□ -0.7
TMEM53-204ENST00000372243 RNASE13Q5GAN3 156 aaKnown RBP10.69□□□□□ -0.7
TMEM53-204ENST00000372243 C2orf88Q9BSF0 95 aa10.69□□□□□ -0.7
TMEM53-204ENST00000372243 MAP1LC3CQ9BXW4 147 aa10.69□□□□□ -0.7
TMEM53-204ENST00000372243 TRAV12-1A0A0B4J245 112 aa10.68□□□□□ -0.7
TMEM53-204ENST00000372243 PRSS1P07477 247 aa10.68□□□□□ -0.7
TMEM53-204ENST00000372243 ENHOQ6UWT2 76 aa10.68□□□□□ -0.7
TMEM53-204ENST00000372243 CST9LQ9H4G1 147 aa10.68□□□□□ -0.7
TMEM53-204ENST00000372243 MIAQ16674 131 aa10.67□□□□□ -0.7
TMEM53-204ENST00000372243 SPATA12Q7Z6I5 190 aa10.67□□□□□ -0.7
TMEM53-204ENST00000372243 UBE2WQ96B02 151 aa10.67□□□□□ -0.7
TMEM53-204ENST00000372243 DNAH6Q9C0G6 4158 aa10.66□□□□□ -0.7
TMEM53-204ENST00000372243 TRAV8-3A0A0A6YYJ7 113 aa10.66□□□□□ -0.7
TMEM53-204ENST00000372243 TRAV8-4A0A0B4J246 113 aa10.66□□□□□ -0.7
TMEM53-204ENST00000372243 FAM19A3Q7Z5A8 133 aa10.66□□□□□ -0.7
TMEM53-204ENST00000372243 KRTAP1-5Q9BYS1 174 aa10.66□□□□□ -0.7
TMEM53-204ENST00000372243 LINC00959A0A1B0GUT2 108 aa10.65□□□□□ -0.7
TMEM53-204ENST00000372243 PRSS29PA6NIE9 313 aa10.65□□□□□ -0.7
TMEM53-204ENST00000372243 ZC2HC1BQ5TFG8 222 aa10.65□□□□□ -0.7
TMEM53-204ENST00000372243 CLPSL2Q6UWE3 100 aa10.65□□□□□ -0.7
TMEM53-204ENST00000372243 LCE6AA0A183 80 aa10.65□□□□□ -0.71
TMEM53-204ENST00000372243 SYS1-DBNDD2H3BUS1 97 aa10.65□□□□□ -0.71
TMEM53-204ENST00000372243 C3orf79P0CE67 100 aa10.65□□□□□ -0.71
TMEM53-204ENST00000372243 UBE2D1P51668 147 aa10.65□□□□□ -0.71
TMEM53-204ENST00000372243 SS18Q15532 418 aa10.65□□□□□ -0.71
TMEM53-204ENST00000372243 Q6ZR54 194 aa10.65□□□□□ -0.71
TMEM53-204ENST00000372243 TRAV13-1A0A0B4J241 112 aa10.64□□□□□ -0.71
TMEM53-204ENST00000372243 IGKV3OR2-268A0A0C4DH90 116 aa10.64□□□□□ -0.71
TMEM53-204ENST00000372243 PET117Q6UWS5 81 aa10.64□□□□□ -0.71
TMEM53-204ENST00000372243 SEC11AP67812 179 aa10.63□□□□□ -0.71
TMEM53-204ENST00000372243 KRTDAPP60985 99 aa10.62□□□□□ -0.71
TMEM53-204ENST00000372243 ODF1Q14990 250 aa10.62□□□□□ -0.71
TMEM53-204ENST00000372243 RMI2Q96E14 147 aa10.62□□□□□ -0.71
TMEM53-204ENST00000372243 CHTOPQ9Y3Y2 248 aaKnown RBP10.62□□□□□ -0.71
TMEM53-204ENST00000372243 KMT2AQ03164 3969 aa10.61□□□□□ -0.71
TMEM53-204ENST00000372243 F8VRH5 84 aa10.61□□□□□ -0.71
TMEM53-204ENST00000372243 H0Y8G0 127 aa10.61□□□□□ -0.71
TMEM53-204ENST00000372243 LINC00242Q5T6M2 205 aa10.61□□□□□ -0.71
TMEM53-204ENST00000372243 TINCRA0A1B0GVN0 87 aa10.6□□□□□ -0.71
TMEM53-204ENST00000372243 IGLC3P0DOY3 106 aa10.6□□□□□ -0.71
TMEM53-204ENST00000372243 NFE4Q86UQ8 179 aa10.6□□□□□ -0.71
TMEM53-204ENST00000372243 OR10D4PQ8NGN7 298 aa10.6□□□□□ -0.71
TMEM53-204ENST00000372243 CHCHD10Q8WYQ3 142 aaPredicted RBP10.6□□□□□ -0.71
TMEM53-204ENST00000372243 C1orf43Q9BWL3 253 aa10.6□□□□□ -0.71
TMEM53-204ENST00000372243 Q9HAA7 133 aa10.6□□□□□ -0.71
TMEM53-204ENST00000372243 COX11Q9Y6N1 276 aa10.6□□□□□ -0.71
TMEM53-204ENST00000372243 IGLV4-69A0A075B6H9 119 aa10.6□□□□□ -0.71
TMEM53-204ENST00000372243 IGLV10-54A0A075B6I4 117 aa10.6□□□□□ -0.71
TMEM53-204ENST00000372243 A0A0J9YXV3 536 aa10.6□□□□□ -0.71
TMEM53-204ENST00000372243 M0R2N4 97 aa10.6□□□□□ -0.71
TMEM53-204ENST00000372243 HERVK_113P63121 156 aa10.6□□□□□ -0.71
TMEM53-204ENST00000372243 LINC01545Q5VT33 79 aa10.6□□□□□ -0.71
TMEM53-204ENST00000372243 MRPL35Q9NZE8 188 aaKnown RBP10.6□□□□□ -0.71
TMEM53-204ENST00000372243 IGKV2D-24A0A075B6R9 120 aa10.59□□□□□ -0.71
TMEM53-204ENST00000372243 KRTAP26-1Q6PEX3 210 aa10.59□□□□□ -0.71
TMEM53-204ENST00000372243 CD164L2Q6UWJ8 174 aa10.59□□□□□ -0.71
TMEM53-204ENST00000372243 SACSQ9NZJ4 4579 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms