RNA–Protein interactions for RNA: ENST00000371320.7

SSBP3-204, Transcript of single stranded DNA binding protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SSBP3, Length 2,077 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-204ENST00000371320 A4D1N5 150 aa20.71■□□□□ 0.91
SSBP3-204ENST00000371320 C16orf74Q96GX8 76 aa20.71■□□□□ 0.91
SSBP3-204ENST00000371320 VSIG2Q96IQ7 327 aa20.71■□□□□ 0.91
SSBP3-204ENST00000371320 PRO1854Q9UHT4 67 aa20.71■□□□□ 0.91
SSBP3-204ENST00000371320 SETXQ7Z333 2677 aaKnown RBP20.71■□□□□ 0.91
SSBP3-204ENST00000371320 SPINK8P0C7L1 97 aa20.7■□□□□ 0.9
SSBP3-204ENST00000371320 MUSTN1Q8IVN3 82 aa20.7■□□□□ 0.9
SSBP3-204ENST00000371320 UBE2D3P61077 147 aa20.69■□□□□ 0.9
SSBP3-204ENST00000371320 UBE2D2P62837 147 aa20.69■□□□□ 0.9
SSBP3-204ENST00000371320 DAZ4Q86SG3 579 aaKnown RBP20.69■□□□□ 0.9
SSBP3-204ENST00000371320 SMR3AQ99954 134 aa20.69■□□□□ 0.9
SSBP3-204ENST00000371320 C1QTNF4Q9BXJ3 329 aa20.69■□□□□ 0.9
SSBP3-204ENST00000371320 DAZ3Q9NR90 486 aaKnown RBP20.69■□□□□ 0.9
SSBP3-204ENST00000371320 NDUFA12Q9UI09 145 aa20.69■□□□□ 0.9
SSBP3-204ENST00000371320 PRO0461Q9UI25 63 aa20.69■□□□□ 0.9
SSBP3-204ENST00000371320 LYRM7Q5U5X0 104 aa20.68■□□□□ 0.9
SSBP3-204ENST00000371320 MTURNQ8N3F0 131 aa20.68■□□□□ 0.9
SSBP3-204ENST00000371320 JMJD1CQ15652 2540 aa20.67■□□□□ 0.9
SSBP3-204ENST00000371320 PLAC8L1A1L4L8 177 aa20.66■□□□□ 0.9
SSBP3-204ENST00000371320 PSMB2P49721 201 aa20.66■□□□□ 0.9
SSBP3-204ENST00000371320 GAGE12JA6NER3 117 aa20.66■□□□□ 0.9
SSBP3-204ENST00000371320 TIRAPP58753 221 aa20.66■□□□□ 0.9
SSBP3-204ENST00000371320 GAGE4Q13068 117 aa20.66■□□□□ 0.9
SSBP3-204ENST00000371320 GAGE5Q13069 117 aa20.66■□□□□ 0.9
SSBP3-204ENST00000371320 A8MZ25 164 aa20.65■□□□□ 0.9
SSBP3-204ENST00000371320 LINC00694P0DN24 101 aa20.65■□□□□ 0.9
SSBP3-204ENST00000371320 CSNK1G2-AS1Q8NCQ2 148 aa20.65■□□□□ 0.9
SSBP3-204ENST00000371320 CDKN2A-AS1Q9UH64 79 aa20.65■□□□□ 0.9
SSBP3-204ENST00000371320 TRGV2A0A075B6R0 118 aa20.64■□□□□ 0.89
SSBP3-204ENST00000371320 GAGE7O76087 117 aa20.64■□□□□ 0.89
SSBP3-204ENST00000371320 GAGE12FP0CL80 117 aa20.64■□□□□ 0.89
SSBP3-204ENST00000371320 GAGE12GP0CL81 117 aa20.64■□□□□ 0.89
SSBP3-204ENST00000371320 GAGE12IP0CL82 117 aa20.64■□□□□ 0.89
SSBP3-204ENST00000371320 NTM-AS1Q6ZSK4 140 aa20.64■□□□□ 0.89
SSBP3-204ENST00000371320 LITAFQ99732 161 aa20.64■□□□□ 0.89
SSBP3-204ENST00000371320 ETDBQ3ZM63 59 aa20.63■□□□□ 0.89
SSBP3-204ENST00000371320 SH2D6Q7Z4S9 175 aa20.63■□□□□ 0.89
SSBP3-204ENST00000371320 NOTCH3Q9UM47 2321 aa20.63■□□□□ 0.89
SSBP3-204ENST00000371320 IGLV5-45A0A087WSX0 123 aa20.62■□□□□ 0.89
SSBP3-204ENST00000371320 TRAV16A0A0A6YYK6 109 aaPredicted RBP20.62■□□□□ 0.89
SSBP3-204ENST00000371320 A0A0B4J2C4 111 aa20.62■□□□□ 0.89
SSBP3-204ENST00000371320 EIF4EBP3O60516 100 aaPredicted RBP20.61■□□□□ 0.89
SSBP3-204ENST00000371320 C21orf62-AS1Q17RA5 79 aa20.61■□□□□ 0.89
SSBP3-204ENST00000371320 CSDC2Q9Y534 153 aaKnown RBP20.61■□□□□ 0.89
SSBP3-204ENST00000371320 ZFAND6Q6FIF0 208 aa20.6■□□□□ 0.89
SSBP3-204ENST00000371320 OVOL2Q9BRP0 275 aa20.6■□□□□ 0.89
SSBP3-204ENST00000371320 HECTD1Q9ULT8 2610 aa20.6■□□□□ 0.89
SSBP3-204ENST00000371320 PRSS2P07478 247 aa20.59■□□□□ 0.89
SSBP3-204ENST00000371320 KRTAP10-3P60369 221 aa20.59■□□□□ 0.89
SSBP3-204ENST00000371320 COX6A2Q02221 97 aa20.59■□□□□ 0.89
SSBP3-204ENST00000371320 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP20.59■□□□□ 0.89
SSBP3-204ENST00000371320 HIVEP2P31629 2446 aa20.59■□□□□ 0.89
SSBP3-204ENST00000371320 IGHV3-33P01772 117 aa20.58■□□□□ 0.89
SSBP3-204ENST00000371320 HERVK_113P63121 156 aa20.58■□□□□ 0.89
SSBP3-204ENST00000371320 SBSPONQ8IVN8 264 aa20.58■□□□□ 0.89
SSBP3-204ENST00000371320 TRBV20-1A0A075B6N2 111 aa20.58■□□□□ 0.88
SSBP3-204ENST00000371320 PF4P02776 101 aa20.58■□□□□ 0.88
SSBP3-204ENST00000371320 SCGB1C2P0DMR2 95 aa20.58■□□□□ 0.88
SSBP3-204ENST00000371320 ADAMTSL4-AS1Q5T5F5 129 aa20.58■□□□□ 0.88
SSBP3-204ENST00000371320 SPANXDQ9BXN6 97 aa20.58■□□□□ 0.88
SSBP3-204ENST00000371320 SPANXCQ9NY87 97 aa20.58■□□□□ 0.88
SSBP3-204ENST00000371320 ERG28Q9UKR5 140 aa20.58■□□□□ 0.88
SSBP3-204ENST00000371320 FASNP49327 2511 aaKnown RBP20.58■□□□□ 0.88
SSBP3-204ENST00000371320 SMAGPQ0VAQ4 97 aa20.57■□□□□ 0.88
SSBP3-204ENST00000371320 LINC00242Q5T6M2 205 aa20.57■□□□□ 0.88
SSBP3-204ENST00000371320 TMEM101Q96IK0 257 aa20.57■□□□□ 0.88
SSBP3-204ENST00000371320 CIDEAO60543 219 aa20.57■□□□□ 0.88
SSBP3-204ENST00000371320 TCL1BO95988 128 aa20.57■□□□□ 0.88
SSBP3-204ENST00000371320 GTSF1LQ9H1H1 148 aa20.55■□□□□ 0.88
SSBP3-204ENST00000371320 TRBV6-4A0A1B0GX49 114 aa20.55■□□□□ 0.88
SSBP3-204ENST00000371320 J3QR89 54 aa20.55■□□□□ 0.88
SSBP3-204ENST00000371320 LY6G6DO95868 133 aa20.55■□□□□ 0.88
SSBP3-204ENST00000371320 TRGV4A0A0C4DH28 118 aa20.54■□□□□ 0.88
SSBP3-204ENST00000371320 H7C2G1 150 aa20.54■□□□□ 0.88
SSBP3-204ENST00000371320 MIAQ16674 131 aa20.54■□□□□ 0.88
SSBP3-204ENST00000371320 FAM19A3Q7Z5A8 133 aa20.54■□□□□ 0.88
SSBP3-204ENST00000371320 TRAV13-1A0A0B4J241 112 aa20.54■□□□□ 0.88
SSBP3-204ENST00000371320 TMEM243Q9BU79 118 aa20.54■□□□□ 0.88
SSBP3-204ENST00000371320 CDC42SE2Q9NRR3 84 aa20.54■□□□□ 0.88
SSBP3-204ENST00000371320 LOC100131303A0A0U1RQF7 123 aa20.53■□□□□ 0.88
SSBP3-204ENST00000371320 UBE2L6O14933 153 aa20.53■□□□□ 0.88
SSBP3-204ENST00000371320 SMCPP49901 116 aaPredicted RBP20.53■□□□□ 0.88
SSBP3-204ENST00000371320 LINC00482Q8N8I6 264 aa20.52■□□□□ 0.88
SSBP3-204ENST00000371320 NDUFA1O15239 70 aa20.52■□□□□ 0.87
SSBP3-204ENST00000371320 IGLV5-39A0A0G2JS06 123 aa20.5■□□□□ 0.87
SSBP3-204ENST00000371320 TIMM17BO60830 172 aa20.5■□□□□ 0.87
SSBP3-204ENST00000371320 Q1RN00 199 aa20.49■□□□□ 0.87
SSBP3-204ENST00000371320 NPC2P61916 151 aa20.47■□□□□ 0.87
SSBP3-204ENST00000371320 FHL2Q14192 279 aa20.47■□□□□ 0.87
SSBP3-204ENST00000371320 SMIM1B2RUZ4 78 aa20.46■□□□□ 0.87
SSBP3-204ENST00000371320 ATP6V0E2Q8NHE4 81 aa20.45■□□□□ 0.86
SSBP3-204ENST00000371320 C2CD3Q4AC94 2353 aa20.45■□□□□ 0.86
SSBP3-204ENST00000371320 H7C423 109 aa20.44■□□□□ 0.86
SSBP3-204ENST00000371320 CIRBPQ14011 172 aaKnown RBP20.44■□□□□ 0.86
SSBP3-204ENST00000371320 Q9H8V8 135 aa20.44■□□□□ 0.86
SSBP3-204ENST00000371320 IFITM1P13164 125 aa20.44■□□□□ 0.86
SSBP3-204ENST00000371320 INSL3P51460 131 aa20.44■□□□□ 0.86
SSBP3-204ENST00000371320 RNF183Q96D59 192 aa20.42■□□□□ 0.86
SSBP3-204ENST00000371320 CRLF1O75462 422 aa20.42■□□□□ 0.86
SSBP3-204ENST00000371320 DAND5Q8N907 189 aa20.42■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms