RNA–Protein interactions for RNA: ENST00000367478.8

TPR-201, Transcript of translocated promoter region, nuclear basket protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TPR, Length 9,708 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPR-201ENST00000367478 LRRK2Q5S007 2527 aa9.38□□□□□ -0.91
TPR-201ENST00000367478 CDKN2A-AS1Q9UH64 79 aa9.38□□□□□ -0.91
TPR-201ENST00000367478 IGLV1-47P01700 117 aa9.38□□□□□ -0.91
TPR-201ENST00000367478 ZFAND3Q9H8U3 227 aa9.38□□□□□ -0.91
TPR-201ENST00000367478 LRP4O75096 1905 aa9.38□□□□□ -0.91
TPR-201ENST00000367478 IGLV4-3A0A075B6K6 122 aa9.38□□□□□ -0.91
TPR-201ENST00000367478 M0R378 163 aa9.38□□□□□ -0.91
TPR-201ENST00000367478 PLA2G2CQ5R387 149 aa9.38□□□□□ -0.91
TPR-201ENST00000367478 RETNQ9HD89 108 aa9.38□□□□□ -0.91
TPR-201ENST00000367478 TRBV6-8A0A0A6YYG3 113 aa9.38□□□□□ -0.91
TPR-201ENST00000367478 TRBV6-5A0A0K0K1A5 114 aa9.37□□□□□ -0.91
TPR-201ENST00000367478 DAZAP2Q15038 168 aaPredicted RBP9.37□□□□□ -0.91
TPR-201ENST00000367478 IGFL2Q6UWQ7 119 aa9.37□□□□□ -0.91
TPR-201ENST00000367478 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.37□□□□□ -0.91
TPR-201ENST00000367478 C6orf99Q4VX62 202 aa9.37□□□□□ -0.91
TPR-201ENST00000367478 LY6G6EA0A0G2JKS1 128 aa9.36□□□□□ -0.91
TPR-201ENST00000367478 U3KQA8 63 aa9.36□□□□□ -0.91
TPR-201ENST00000367478 TRBV6-4A0A1B0GX49 114 aa9.36□□□□□ -0.91
TPR-201ENST00000367478 LST1O00453 97 aa9.36□□□□□ -0.91
TPR-201ENST00000367478 SYCNQ0VAF6 134 aa9.36□□□□□ -0.91
TPR-201ENST00000367478 WFDC10AQ9H1F0 79 aa9.36□□□□□ -0.91
TPR-201ENST00000367478 CPAMD8Q8IZJ3 1885 aa9.36□□□□□ -0.91
TPR-201ENST00000367478 PRYO14603 147 aa9.36□□□□□ -0.91
TPR-201ENST00000367478 UBE2D3P61077 147 aa9.36□□□□□ -0.91
TPR-201ENST00000367478 ZNF22P17026 224 aaPredicted RBP9.36□□□□□ -0.91
TPR-201ENST00000367478 NRACQ8N912 160 aa9.36□□□□□ -0.91
TPR-201ENST00000367478 Q6JHZ5 121 aa9.35□□□□□ -0.91
TPR-201ENST00000367478 Q6ZVQ6 151 aa9.35□□□□□ -0.91
TPR-201ENST00000367478 A0A096LNI7 61 aa9.35□□□□□ -0.91
TPR-201ENST00000367478 LRCOL1A6NCL2 159 aa9.35□□□□□ -0.91
TPR-201ENST00000367478 PIP4P1Q86T03 277 aa9.35□□□□□ -0.91
TPR-201ENST00000367478 U3KQK5 164 aa9.35□□□□□ -0.91
TPR-201ENST00000367478 CEMP1Q6PRD7 247 aaPredicted RBP9.35□□□□□ -0.91
TPR-201ENST00000367478 CD164L2Q6UWJ8 174 aa9.35□□□□□ -0.91
TPR-201ENST00000367478 A0A0J9YWU9 116 aa9.35□□□□□ -0.91
TPR-201ENST00000367478 DEFB4AO15263 64 aa9.35□□□□□ -0.91
TPR-201ENST00000367478 ODF3L1Q8IXM7 274 aa9.35□□□□□ -0.91
TPR-201ENST00000367478 DEFB131BA0A096LNP1 70 aa9.34□□□□□ -0.91
TPR-201ENST00000367478 SLPIP03973 132 aa9.34□□□□□ -0.91
TPR-201ENST00000367478 CCDC140Q96MF4 163 aa9.34□□□□□ -0.91
TPR-201ENST00000367478 C10orf25Q5T742 122 aa9.34□□□□□ -0.91
TPR-201ENST00000367478 LY6LH3BQJ8 138 aa9.33□□□□□ -0.92
TPR-201ENST00000367478 UNQ9165/PRO28630Q6UXU0 137 aa9.33□□□□□ -0.92
TPR-201ENST00000367478 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.33□□□□□ -0.92
TPR-201ENST00000367478 ZNF524Q96C55 264 aa9.33□□□□□ -0.92
TPR-201ENST00000367478 MRPS12O15235 138 aaKnown RBP9.33□□□□□ -0.92
TPR-201ENST00000367478 ZFHX2Q9C0A1 2572 aaPredicted RBP9.33□□□□□ -0.92
TPR-201ENST00000367478 FAM19A5Q7Z5A7 132 aaPredicted RBP9.33□□□□□ -0.92
TPR-201ENST00000367478 Q6ZTI0 123 aa9.33□□□□□ -0.92
TPR-201ENST00000367478 M0QY20 66 aa9.32□□□□□ -0.92
TPR-201ENST00000367478 IGLV4-69A0A075B6H9 119 aa9.32□□□□□ -0.92
TPR-201ENST00000367478 WFDC13Q8IUB5 93 aa9.32□□□□□ -0.92
TPR-201ENST00000367478 IGLV2-14P01704 120 aa9.32□□□□□ -0.92
TPR-201ENST00000367478 CFAP126Q5VTH2 177 aa9.32□□□□□ -0.92
TPR-201ENST00000367478 LOC107984640A0A0U1RRK4 108 aa9.31□□□□□ -0.92
TPR-201ENST00000367478 A6NDX4 124 aa9.31□□□□□ -0.92
TPR-201ENST00000367478 TNFRSF13BO14836 293 aaPredicted RBP9.31□□□□□ -0.92
TPR-201ENST00000367478 SPINK6Q6UWN8 80 aa9.31□□□□□ -0.92
TPR-201ENST00000367478 F8P00451 2351 aa9.31□□□□□ -0.92
TPR-201ENST00000367478 Q6ZQY7 126 aa9.3□□□□□ -0.92
TPR-201ENST00000367478 LINC00574Q9H8X3 128 aa9.3□□□□□ -0.92
TPR-201ENST00000367478 K7EQG2 157 aa9.3□□□□□ -0.92
TPR-201ENST00000367478 IGF1P05019 195 aa9.3□□□□□ -0.92
TPR-201ENST00000367478 PLA2G2EQ9NZK7 142 aa9.3□□□□□ -0.92
TPR-201ENST00000367478 TRBV7-6A0A0J9YX20 115 aa9.3□□□□□ -0.92
TPR-201ENST00000367478 FBXL19-AS1Q494R0 122 aa9.3□□□□□ -0.92
TPR-201ENST00000367478 XAGE1AQ9HD64 81 aa9.29□□□□□ -0.92
TPR-201ENST00000367478 FSTL3O95633 263 aa9.29□□□□□ -0.92
TPR-201ENST00000367478 EBI3Q14213 229 aa9.29□□□□□ -0.92
TPR-201ENST00000367478 Q8N7P7 452 aa9.29□□□□□ -0.92
TPR-201ENST00000367478 E7EUB6 86 aa9.28□□□□□ -0.92
TPR-201ENST00000367478 VPREB1P12018 145 aa9.28□□□□□ -0.92
TPR-201ENST00000367478 DNAJC9-AS1A6NH13 148 aa9.28□□□□□ -0.92
TPR-201ENST00000367478 SPRNQ5BIV9 151 aa9.28□□□□□ -0.92
TPR-201ENST00000367478 COL5A1P20908 1838 aaPredicted RBP9.28□□□□□ -0.92
TPR-201ENST00000367478 ZNF80P51504 273 aaPredicted RBP9.28□□□□□ -0.92
TPR-201ENST00000367478 FAM30AQ9NZY2 134 aa9.28□□□□□ -0.92
TPR-201ENST00000367478 LINC00694P0DN24 101 aa9.28□□□□□ -0.92
TPR-201ENST00000367478 SMIM11BQ8TCY0 68 aa9.28□□□□□ -0.92
TPR-201ENST00000367478 CCDC179H3BU77 68 aa9.27□□□□□ -0.92
TPR-201ENST00000367478 ZNF73O43830 326 aaPredicted RBP9.27□□□□□ -0.92
TPR-201ENST00000367478 GRNP28799 593 aaKnown RBP9.27□□□□□ -0.92
TPR-201ENST00000367478 DEFB114Q30KQ6 69 aa9.27□□□□□ -0.92
TPR-201ENST00000367478 IGKV2-28A0A075B6P5 120 aa9.27□□□□□ -0.93
TPR-201ENST00000367478 TRAV10A0A0B4J240 114 aa9.27□□□□□ -0.93
TPR-201ENST00000367478 IGKV2D-28P01615 120 aa9.27□□□□□ -0.93
TPR-201ENST00000367478 C11orf1Q9H5F2 150 aa9.27□□□□□ -0.93
TPR-201ENST00000367478 ZFP36P26651 326 aaKnown RBP9.27□□□□□ -0.93
TPR-201ENST00000367478 MRGPRG-AS1Q2M3A8 158 aa9.27□□□□□ -0.93
TPR-201ENST00000367478 LELP1Q5T871 98 aa9.26□□□□□ -0.93
TPR-201ENST00000367478 IGLV2-8P01709 118 aa9.26□□□□□ -0.93
TPR-201ENST00000367478 TP53TG3Q9ULZ0 132 aa9.26□□□□□ -0.93
TPR-201ENST00000367478 P0C879 139 aa9.26□□□□□ -0.93
TPR-201ENST00000367478 Q8IZM0 81 aa9.25□□□□□ -0.93
TPR-201ENST00000367478 RBX1P62877 108 aa9.25□□□□□ -0.93
TPR-201ENST00000367478 GDF5OSQ5U4N7 250 aa9.25□□□□□ -0.93
TPR-201ENST00000367478 EIF4EBP1Q13541 118 aaPredicted RBP9.25□□□□□ -0.93
TPR-201ENST00000367478 FN1P02751 2386 aaKnown RBP9.25□□□□□ -0.93
TPR-201ENST00000367478 NTM-AS1Q6ZSK4 140 aa9.25□□□□□ -0.93
TPR-201ENST00000367478 TLN2Q9Y4G6 2542 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms