RNA–Protein interactions for RNA: ENST00000367279.8

PTPN7-202, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN7, Length 3,265 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-202ENST00000367279 GAGE12JA6NER3 117 aa8.92□□□□□ -0.98
PTPN7-202ENST00000367279 RPL13AP40429 203 aaKnown RBP8.92□□□□□ -0.98
PTPN7-202ENST00000367279 GAGE4Q13068 117 aa8.92□□□□□ -0.98
PTPN7-202ENST00000367279 GAGE5Q13069 117 aa8.92□□□□□ -0.98
PTPN7-202ENST00000367279 LITAFQ99732 161 aa8.92□□□□□ -0.98
PTPN7-202ENST00000367279 TEX49A0A1B0GTD5 131 aa8.91□□□□□ -0.98
PTPN7-202ENST00000367279 COX6A2Q02221 97 aa8.91□□□□□ -0.98
PTPN7-202ENST00000367279 MIAQ16674 131 aa8.91□□□□□ -0.98
PTPN7-202ENST00000367279 C2orf82Q6UX34 121 aa8.91□□□□□ -0.98
PTPN7-202ENST00000367279 MTORP42345 2549 aa8.91□□□□□ -0.98
PTPN7-202ENST00000367279 ACANP16112 2415 aa8.91□□□□□ -0.98
PTPN7-202ENST00000367279 Q9H8V8 135 aa8.91□□□□□ -0.98
PTPN7-202ENST00000367279 DEFB113Q30KQ7 82 aa8.9□□□□□ -0.98
PTPN7-202ENST00000367279 MEIG1Q5JSS6 88 aa8.9□□□□□ -0.98
PTPN7-202ENST00000367279 LINC00694P0DN24 101 aa8.9□□□□□ -0.98
PTPN7-202ENST00000367279 ODF3L2Q3SX64 289 aa8.9□□□□□ -0.98
PTPN7-202ENST00000367279 Q6ZTI0 123 aa8.9□□□□□ -0.98
PTPN7-202ENST00000367279 TMEM101Q96IK0 257 aa8.9□□□□□ -0.98
PTPN7-202ENST00000367279 USP24Q9UPU5 2620 aa8.9□□□□□ -0.98
PTPN7-202ENST00000367279 FSHBP01225 129 aa8.9□□□□□ -0.99
PTPN7-202ENST00000367279 CIRBPQ14011 172 aaKnown RBP8.9□□□□□ -0.99
PTPN7-202ENST00000367279 RNF152Q8N8N0 203 aa8.9□□□□□ -0.99
PTPN7-202ENST00000367279 SBSPONQ8IVN8 264 aa8.89□□□□□ -0.99
PTPN7-202ENST00000367279 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.89□□□□□ -0.99
PTPN7-202ENST00000367279 BBC3Q96PG8 261 aaPredicted RBP8.89□□□□□ -0.99
PTPN7-202ENST00000367279 RS1O15537 224 aa8.89□□□□□ -0.99
PTPN7-202ENST00000367279 RPL35AP18077 110 aaKnown RBP8.89□□□□□ -0.99
PTPN7-202ENST00000367279 RPL36AP83881 106 aaKnown RBP8.89□□□□□ -0.99
PTPN7-202ENST00000367279 RPL36ALQ969Q0 106 aaKnown RBP8.89□□□□□ -0.99
PTPN7-202ENST00000367279 DNAJC30Q96LL9 226 aa8.88□□□□□ -0.99
PTPN7-202ENST00000367279 NOP10Q9NPE3 64 aaKnown RBP8.88□□□□□ -0.99
PTPN7-202ENST00000367279 YAE1D1Q9NRH1 226 aa8.88□□□□□ -0.99
PTPN7-202ENST00000367279 TMEM262E9PQX1 116 aa8.88□□□□□ -0.99
PTPN7-202ENST00000367279 ZFAND6Q6FIF0 208 aa8.88□□□□□ -0.99
PTPN7-202ENST00000367279 TRBV30A0A0K0K1B3 111 aa8.88□□□□□ -0.99
PTPN7-202ENST00000367279 C1orf158Q8N1D5 194 aa8.88□□□□□ -0.99
PTPN7-202ENST00000367279 SPANXDQ9BXN6 97 aa8.88□□□□□ -0.99
PTPN7-202ENST00000367279 WFDC10AQ9H1F0 79 aa8.88□□□□□ -0.99
PTPN7-202ENST00000367279 EDA2RQ9HAV5 297 aa8.88□□□□□ -0.99
PTPN7-202ENST00000367279 SPANXCQ9NY87 97 aa8.88□□□□□ -0.99
PTPN7-202ENST00000367279 FLNAP21333 2647 aaKnown RBP8.87□□□□□ -0.99
PTPN7-202ENST00000367279 ITPR3Q14573 2671 aa8.87□□□□□ -0.99
PTPN7-202ENST00000367279 UBE2WQ96B02 151 aa8.87□□□□□ -0.99
PTPN7-202ENST00000367279 TRGV2A0A075B6R0 118 aa8.87□□□□□ -0.99
PTPN7-202ENST00000367279 TRAV8-4A0A0B4J246 113 aa8.87□□□□□ -0.99
PTPN7-202ENST00000367279 UBE2L6O14933 153 aa8.87□□□□□ -0.99
PTPN7-202ENST00000367279 PRIMA1Q86XR5 153 aa8.87□□□□□ -0.99
PTPN7-202ENST00000367279 TRBV10-2A0A0K0K1G8 114 aa8.86□□□□□ -0.99
PTPN7-202ENST00000367279 CCL24O00175 119 aa8.86□□□□□ -0.99
PTPN7-202ENST00000367279 SNCGO76070 127 aa8.86□□□□□ -0.99
PTPN7-202ENST00000367279 GAGE7O76087 117 aa8.86□□□□□ -0.99
PTPN7-202ENST00000367279 GAGE12FP0CL80 117 aa8.86□□□□□ -0.99
PTPN7-202ENST00000367279 GAGE12GP0CL81 117 aa8.86□□□□□ -0.99
PTPN7-202ENST00000367279 GAGE12IP0CL82 117 aa8.86□□□□□ -0.99
PTPN7-202ENST00000367279 NIPBLQ6KC79 2804 aaeCLIP8.86□□□□□ -0.99
PTPN7-202ENST00000367279 FN1P02751 2386 aaKnown RBP8.86□□□□□ -0.99
PTPN7-202ENST00000367279 TEX29Q8N6K0 151 aa8.86□□□□□ -0.99
PTPN7-202ENST00000367279 TOMM7Q9P0U1 55 aa8.86□□□□□ -0.99
PTPN7-202ENST00000367279 BEAN1Q3B7T3 259 aa8.86□□□□□ -0.99
PTPN7-202ENST00000367279 A8MTW9 85 aa8.85□□□□□ -0.99
PTPN7-202ENST00000367279 K7EQD1 137 aa8.85□□□□□ -0.99
PTPN7-202ENST00000367279 HERVK_113P63121 156 aa8.85□□□□□ -0.99
PTPN7-202ENST00000367279 LINC00242Q5T6M2 205 aa8.85□□□□□ -0.99
PTPN7-202ENST00000367279 DNAJC9-AS1A6NH13 148 aa8.85□□□□□ -0.99
PTPN7-202ENST00000367279 TRAV26-1A0A087WT03 109 aa8.85□□□□□ -0.99
PTPN7-202ENST00000367279 H7C423 109 aa8.85□□□□□ -0.99
PTPN7-202ENST00000367279 CITED2Q99967 270 aaPredicted RBP8.85□□□□□ -0.99
PTPN7-202ENST00000367279 ANAPC13Q9BS18 74 aa8.85□□□□□ -0.99
PTPN7-202ENST00000367279 LOC100131303A0A0U1RQF7 123 aa8.84□□□□□ -0.99
PTPN7-202ENST00000367279 NDUFA1O15239 70 aa8.84□□□□□ -0.99
PTPN7-202ENST00000367279 HIST2H2BCQ6DN03 193 aa8.84□□□□□ -0.99
PTPN7-202ENST00000367279 WFDC11Q8NEX6 87 aa8.84□□□□□ -0.99
PTPN7-202ENST00000367279 PLA2G2AP14555 144 aa8.84□□□□□ -0.99
PTPN7-202ENST00000367279 Q8N2B8 174 aa8.84□□□□□ -0.99
PTPN7-202ENST00000367279 TIRAPP58753 221 aa8.83□□□□□ -1
PTPN7-202ENST00000367279 PIK3CD-AS1Q5SR53 167 aa8.83□□□□□ -1
PTPN7-202ENST00000367279 NTM-AS1Q6ZSK4 140 aa8.83□□□□□ -1
PTPN7-202ENST00000367279 LINC00308Q8TCZ7 52 aa8.83□□□□□ -1
PTPN7-202ENST00000367279 GAGE2BQ13066 116 aa8.83□□□□□ -1
PTPN7-202ENST00000367279 GAGE2EQ4V326 116 aa8.83□□□□□ -1
PTPN7-202ENST00000367279 RNF183Q96D59 192 aa8.83□□□□□ -1
PTPN7-202ENST00000367279 GAGE2DQ9UEU5 116 aa8.83□□□□□ -1
PTPN7-202ENST00000367279 APCP25054 2843 aa8.82□□□□□ -1
PTPN7-202ENST00000367279 TRAV4A0A0B4J268 109 aa8.82□□□□□ -1
PTPN7-202ENST00000367279 CRLF1O75462 422 aa8.82□□□□□ -1
PTPN7-202ENST00000367279 TRGV4A0A0C4DH28 118 aa8.82□□□□□ -1
PTPN7-202ENST00000367279 IFITM1P13164 125 aa8.82□□□□□ -1
PTPN7-202ENST00000367279 GAGE6Q13070 117 aa8.82□□□□□ -1
PTPN7-202ENST00000367279 TTC32Q5I0X7 151 aa8.81□□□□□ -1
PTPN7-202ENST00000367279 SETXQ7Z333 2677 aaKnown RBP8.81□□□□□ -1
PTPN7-202ENST00000367279 SMIM1B2RUZ4 78 aa8.81□□□□□ -1
PTPN7-202ENST00000367279 C15orf53Q8NAA6 179 aa8.81□□□□□ -1
PTPN7-202ENST00000367279 ZNF843Q8N446 348 aa8.81□□□□□ -1
PTPN7-202ENST00000367279 TMEM243Q9BU79 118 aa8.8□□□□□ -1
PTPN7-202ENST00000367279 LST1O00453 97 aa8.8□□□□□ -1
PTPN7-202ENST00000367279 DAZ2Q13117 558 aaKnown RBP8.8□□□□□ -1
PTPN7-202ENST00000367279 DAZ4Q86SG3 579 aaKnown RBP8.8□□□□□ -1
PTPN7-202ENST00000367279 SVIPQ8NHG7 77 aa8.8□□□□□ -1
PTPN7-202ENST00000367279 ESM1Q9NQ30 184 aa8.8□□□□□ -1
PTPN7-202ENST00000367279 DAZ3Q9NR90 486 aaKnown RBP8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms