RNA–Protein interactions for RNA: ENST00000367251.7

SYNE1-205, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 1 (best)

Gene SYNE1, Length 5,837 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-205ENST00000367251 Q6ZUT4 128 aa6.74□□□□□ -1.33
SYNE1-205ENST00000367251 LINC00643Q86TS7 51 aa6.74□□□□□ -1.33
SYNE1-205ENST00000367251 M0QY20 66 aa6.74□□□□□ -1.33
SYNE1-205ENST00000367251 HIST2H2BDQ6DRA6 164 aa6.74□□□□□ -1.33
SYNE1-205ENST00000367251 PPDPFQ9H3Y8 114 aa6.74□□□□□ -1.33
SYNE1-205ENST00000367251 ZNF22P17026 224 aaPredicted RBP6.74□□□□□ -1.33
SYNE1-205ENST00000367251 ZNF706Q9Y5V0 76 aaPredicted RBP6.74□□□□□ -1.33
SYNE1-205ENST00000367251 DEFB1P60022 68 aa6.74□□□□□ -1.33
SYNE1-205ENST00000367251 IGLV4-3A0A075B6K6 122 aa6.74□□□□□ -1.33
SYNE1-205ENST00000367251 TRBV30A0A0K0K1B3 111 aa6.74□□□□□ -1.33
SYNE1-205ENST00000367251 MIR7-3HGQ8N6C7 128 aa6.74□□□□□ -1.33
SYNE1-205ENST00000367251 NRACQ8N912 160 aa6.74□□□□□ -1.33
SYNE1-205ENST00000367251 LINC00482Q8N8I6 264 aa6.73□□□□□ -1.33
SYNE1-205ENST00000367251 PCNX3Q9H6A9 2034 aa6.73□□□□□ -1.33
SYNE1-205ENST00000367251 DEFB114Q30KQ6 69 aa6.73□□□□□ -1.33
SYNE1-205ENST00000367251 LINC00269Q8N2A0 174 aa6.73□□□□□ -1.33
SYNE1-205ENST00000367251 LYRM9A8MSI8 78 aa6.73□□□□□ -1.33
SYNE1-205ENST00000367251 B5MCH6 92 aa6.73□□□□□ -1.33
SYNE1-205ENST00000367251 CLEC2BQ92478 149 aa6.73□□□□□ -1.33
SYNE1-205ENST00000367251 IGKV3D-7A0A0C4DH55 119 aa6.72□□□□□ -1.33
SYNE1-205ENST00000367251 REG3AQ06141 175 aa6.72□□□□□ -1.33
SYNE1-205ENST00000367251 CHD3Q12873 2000 aaKnown RBP6.72□□□□□ -1.33
SYNE1-205ENST00000367251 IGHV4-31P0DP07 118 aa6.72□□□□□ -1.33
SYNE1-205ENST00000367251 COX8CQ7Z4L0 72 aa6.72□□□□□ -1.33
SYNE1-205ENST00000367251 TECTAO75443 2155 aa6.72□□□□□ -1.33
SYNE1-205ENST00000367251 TEX49A0A1B0GTD5 131 aa6.72□□□□□ -1.33
SYNE1-205ENST00000367251 KLLNB2CW77 178 aa6.72□□□□□ -1.33
SYNE1-205ENST00000367251 UFSP1Q6NVU6 142 aa6.72□□□□□ -1.33
SYNE1-205ENST00000367251 DAND5Q8N907 189 aa6.72□□□□□ -1.33
SYNE1-205ENST00000367251 PSMG3-AS1Q96PY0 264 aa6.72□□□□□ -1.33
SYNE1-205ENST00000367251 PRRC2AP48634 2157 aaKnown RBP6.72□□□□□ -1.33
SYNE1-205ENST00000367251 FN1P02751 2386 aaKnown RBP6.72□□□□□ -1.33
SYNE1-205ENST00000367251 PRR15LQ9BU68 103 aa6.72□□□□□ -1.33
SYNE1-205ENST00000367251 C2orf91Q6ZV80 131 aa6.71□□□□□ -1.33
SYNE1-205ENST00000367251 SPTSSBQ8NFR3 76 aa6.71□□□□□ -1.33
SYNE1-205ENST00000367251 X6R8D5 127 aa6.71□□□□□ -1.33
SYNE1-205ENST00000367251 NAV2Q8IVL1 2488 aa6.71□□□□□ -1.34
SYNE1-205ENST00000367251 FAM236AA0A1B0GUQ0 79 aa6.71□□□□□ -1.34
SYNE1-205ENST00000367251 FAM236BA0A1B0GV22 79 aa6.71□□□□□ -1.34
SYNE1-205ENST00000367251 BPY2O14599 106 aa6.71□□□□□ -1.34
SYNE1-205ENST00000367251 BRI3O95415 125 aa6.71□□□□□ -1.34
SYNE1-205ENST00000367251 PIEZO1Q92508 2521 aa6.71□□□□□ -1.34
SYNE1-205ENST00000367251 CRIP2P52943 208 aaPredicted RBP6.71□□□□□ -1.34
SYNE1-205ENST00000367251 CFAP126Q5VTH2 177 aa6.71□□□□□ -1.34
SYNE1-205ENST00000367251 TRBV6-4A0A1B0GX49 114 aa6.71□□□□□ -1.34
SYNE1-205ENST00000367251 IBA57-AS1B1ANH7 110 aa6.71□□□□□ -1.34
SYNE1-205ENST00000367251 MRPS12O15235 138 aaKnown RBP6.71□□□□□ -1.34
SYNE1-205ENST00000367251 IGLV1-40P01703 118 aa6.71□□□□□ -1.34
SYNE1-205ENST00000367251 CPAMD8Q8IZJ3 1885 aa6.71□□□□□ -1.34
SYNE1-205ENST00000367251 C19orf84I3L1E1 186 aa6.7□□□□□ -1.34
SYNE1-205ENST00000367251 JMJD1CQ15652 2540 aa6.7□□□□□ -1.34
SYNE1-205ENST00000367251 MRPS36P82909 103 aaKnown RBP6.7□□□□□ -1.34
SYNE1-205ENST00000367251 ATP5EP2Q5VTU8 51 aa6.7□□□□□ -1.34
SYNE1-205ENST00000367251 ZNF843Q8N446 348 aa6.7□□□□□ -1.34
SYNE1-205ENST00000367251 MAPKAPK5-AS1Q8N8E1 139 aa6.7□□□□□ -1.34
SYNE1-205ENST00000367251 LINC00467Q9BRT7 94 aa6.7□□□□□ -1.34
SYNE1-205ENST00000367251 CHD8Q9HCK8 2581 aa6.7□□□□□ -1.34
SYNE1-205ENST00000367251 A0A0J9YWU9 116 aa6.7□□□□□ -1.34
SYNE1-205ENST00000367251 RNASE3P12724 160 aaKnown RBP6.69□□□□□ -1.34
SYNE1-205ENST00000367251 TNRC6BQ9UPQ9 1833 aaKnown RBP6.69□□□□□ -1.34
SYNE1-205ENST00000367251 MIFP14174 115 aa6.69□□□□□ -1.34
SYNE1-205ENST00000367251 POLR2KP53803 58 aaKnown RBP6.69□□□□□ -1.34
SYNE1-205ENST00000367251 WFDC10BQ8IUB3 73 aa6.69□□□□□ -1.34
SYNE1-205ENST00000367251 IGLV9-49A0A0B4J1Y8 123 aa6.69□□□□□ -1.34
SYNE1-205ENST00000367251 SYCNQ0VAF6 134 aa6.69□□□□□ -1.34
SYNE1-205ENST00000367251 ZNF580Q9UK33 172 aa6.69□□□□□ -1.34
SYNE1-205ENST00000367251 J3KT08 172 aa6.68□□□□□ -1.34
SYNE1-205ENST00000367251 LINC00310P59036 64 aa6.68□□□□□ -1.34
SYNE1-205ENST00000367251 CEMP1Q6PRD7 247 aaPredicted RBP6.68□□□□□ -1.34
SYNE1-205ENST00000367251 Q8N976 141 aa6.68□□□□□ -1.34
SYNE1-205ENST00000367251 LINC00308Q8TCZ7 52 aa6.68□□□□□ -1.34
SYNE1-205ENST00000367251 MRGPRG-AS1Q2M3A8 158 aa6.68□□□□□ -1.34
SYNE1-205ENST00000367251 Q6ZTI0 123 aa6.68□□□□□ -1.34
SYNE1-205ENST00000367251 MED12LQ86YW9 2145 aa6.68□□□□□ -1.34
SYNE1-205ENST00000367251 TSHBP01222 138 aa6.68□□□□□ -1.34
SYNE1-205ENST00000367251 Q6ZVQ6 151 aa6.68□□□□□ -1.34
SYNE1-205ENST00000367251 LINC00337Q8N6G1 96 aa6.68□□□□□ -1.34
SYNE1-205ENST00000367251 CHCHD10Q8WYQ3 142 aaPredicted RBP6.68□□□□□ -1.34
SYNE1-205ENST00000367251 CDKN2A-AS1Q9UH64 79 aa6.68□□□□□ -1.34
SYNE1-205ENST00000367251 ZNF462Q96JM2 2506 aa6.67□□□□□ -1.34
SYNE1-205ENST00000367251 PTH2Q96A98 100 aa6.67□□□□□ -1.34
SYNE1-205ENST00000367251 NDUFC2O95298 119 aa6.67□□□□□ -1.34
SYNE1-205ENST00000367251 IGHV4-30-4P0DP06 118 aa6.67□□□□□ -1.34
SYNE1-205ENST00000367251 C11orf21Q9P2W6 132 aa6.67□□□□□ -1.34
SYNE1-205ENST00000367251 ZNF702PQ9H963 129 aa6.67□□□□□ -1.34
SYNE1-205ENST00000367251 MUC7Q8TAX7 377 aa6.66□□□□□ -1.34
SYNE1-205ENST00000367251 LRRK2Q5S007 2527 aa6.66□□□□□ -1.34
SYNE1-205ENST00000367251 XAGE1AQ9HD64 81 aa6.66□□□□□ -1.34
SYNE1-205ENST00000367251 RBX1P62877 108 aa6.66□□□□□ -1.34
SYNE1-205ENST00000367251 TRBV6-8A0A0A6YYG3 113 aa6.66□□□□□ -1.34
SYNE1-205ENST00000367251 PRR14LQ5THK1 2151 aa6.65□□□□□ -1.34
SYNE1-205ENST00000367251 IMUPQ9GZP8 106 aa6.65□□□□□ -1.34
SYNE1-205ENST00000367251 ARHGAP21Q5T5U3 1957 aa6.65□□□□□ -1.34
SYNE1-205ENST00000367251 IGLV5-52A0A0A0MRZ9 124 aa6.65□□□□□ -1.34
SYNE1-205ENST00000367251 TRIAP1O43715 76 aa6.65□□□□□ -1.34
SYNE1-205ENST00000367251 PRR9Q5T870 116 aa6.65□□□□□ -1.34
SYNE1-205ENST00000367251 DCANP1Q8TF63 244 aa6.65□□□□□ -1.34
SYNE1-205ENST00000367251 URB1-AS1Q96HZ7 61 aa6.65□□□□□ -1.34
SYNE1-205ENST00000367251 NDUFV3P56181 108 aaKnown RBP6.65□□□□□ -1.34
SYNE1-205ENST00000367251 OXLD1Q5BKU9 147 aa6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms