RNA–Protein interactions for RNA: ENST00000367248.7

SYNE1-204, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 7,165 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-204ENST00000367248 B9D2Q9BPU9 175 aa8.56□□□□□ -1.04
SYNE1-204ENST00000367248 F8W1H4 67 aa8.56□□□□□ -1.04
SYNE1-204ENST00000367248 KIR2DL5BQ8NHK3 375 aa8.56□□□□□ -1.04
SYNE1-204ENST00000367248 NEXN-AS1Q8NBZ9 246 aa8.56□□□□□ -1.04
SYNE1-204ENST00000367248 KLLNB2CW77 178 aa8.56□□□□□ -1.04
SYNE1-204ENST00000367248 FAM19A1Q7Z5A9 133 aa8.56□□□□□ -1.04
SYNE1-204ENST00000367248 SPATA12Q7Z6I5 190 aa8.55□□□□□ -1.04
SYNE1-204ENST00000367248 NUP210LQ5VU65 1888 aa8.55□□□□□ -1.04
SYNE1-204ENST00000367248 FLNBO75369 2602 aaKnown RBP8.55□□□□□ -1.04
SYNE1-204ENST00000367248 TDRG1Q3Y452 100 aa8.55□□□□□ -1.04
SYNE1-204ENST00000367248 C7orf33Q8WU49 177 aa8.55□□□□□ -1.04
SYNE1-204ENST00000367248 M0QY20 66 aa8.55□□□□□ -1.04
SYNE1-204ENST00000367248 CRYBA4P53673 196 aa8.55□□□□□ -1.04
SYNE1-204ENST00000367248 DCANP1Q8TF63 244 aa8.55□□□□□ -1.04
SYNE1-204ENST00000367248 NTN5Q8WTR8 489 aaPredicted RBP8.55□□□□□ -1.04
SYNE1-204ENST00000367248 ORMDL1Q9P0S3 153 aa8.55□□□□□ -1.04
SYNE1-204ENST00000367248 HIGD1BQ9P298 99 aa8.55□□□□□ -1.04
SYNE1-204ENST00000367248 G3V4G9 280 aa8.55□□□□□ -1.04
SYNE1-204ENST00000367248 MIR7-3HGQ8N6C7 128 aa8.55□□□□□ -1.04
SYNE1-204ENST00000367248 XAGE1AQ9HD64 81 aa8.55□□□□□ -1.04
SYNE1-204ENST00000367248 COL5A1P20908 1838 aaPredicted RBP8.55□□□□□ -1.04
SYNE1-204ENST00000367248 C11orf21Q9P2W6 132 aa8.54□□□□□ -1.04
SYNE1-204ENST00000367248 ODF3L2Q3SX64 289 aa8.54□□□□□ -1.04
SYNE1-204ENST00000367248 PRR9Q5T870 116 aa8.54□□□□□ -1.04
SYNE1-204ENST00000367248 TRACP01848 142 aa8.54□□□□□ -1.04
SYNE1-204ENST00000367248 K7EP13 123 aa8.53□□□□□ -1.04
SYNE1-204ENST00000367248 LINC00467Q9BRT7 94 aa8.53□□□□□ -1.04
SYNE1-204ENST00000367248 FUSP35637 526 aaKnown RBP eCLIP8.53□□□□□ -1.04
SYNE1-204ENST00000367248 ZNF580Q9UK33 172 aa8.53□□□□□ -1.04
SYNE1-204ENST00000367248 U3KQK5 164 aa8.53□□□□□ -1.04
SYNE1-204ENST00000367248 UBE2D1P51668 147 aa8.53□□□□□ -1.04
SYNE1-204ENST00000367248 BAALC-AS2P0C853 105 aa8.53□□□□□ -1.04
SYNE1-204ENST00000367248 RNASE3P12724 160 aaKnown RBP8.52□□□□□ -1.05
SYNE1-204ENST00000367248 H7C423 109 aa8.52□□□□□ -1.05
SYNE1-204ENST00000367248 TRBV6-8A0A0A6YYG3 113 aa8.52□□□□□ -1.05
SYNE1-204ENST00000367248 FXYD2P54710 66 aa8.52□□□□□ -1.05
SYNE1-204ENST00000367248 PPDPFQ9H3Y8 114 aa8.51□□□□□ -1.05
SYNE1-204ENST00000367248 CDKN2A-AS1Q9UH64 79 aa8.51□□□□□ -1.05
SYNE1-204ENST00000367248 H0Y9J4 135 aa8.51□□□□□ -1.05
SYNE1-204ENST00000367248 TRBV6-5A0A0K0K1A5 114 aa8.5□□□□□ -1.05
SYNE1-204ENST00000367248 IGLV1-51P01701 117 aa8.5□□□□□ -1.05
SYNE1-204ENST00000367248 UFSP1Q6NVU6 142 aa8.5□□□□□ -1.05
SYNE1-204ENST00000367248 RAI1Q7Z5J4 1906 aaPredicted RBP8.5□□□□□ -1.05
SYNE1-204ENST00000367248 DIRC1Q969H9 104 aa8.5□□□□□ -1.05
SYNE1-204ENST00000367248 ACANP16112 2415 aa8.5□□□□□ -1.05
SYNE1-204ENST00000367248 IGLV4-3A0A075B6K6 122 aa8.5□□□□□ -1.05
SYNE1-204ENST00000367248 NDUFB1O75438 58 aa8.5□□□□□ -1.05
SYNE1-204ENST00000367248 TRBV27A0A0K0K1C4 114 aa8.49□□□□□ -1.05
SYNE1-204ENST00000367248 HRCT1Q6UXD1 115 aa8.49□□□□□ -1.05
SYNE1-204ENST00000367248 RNF185Q96GF1 192 aa8.49□□□□□ -1.05
SYNE1-204ENST00000367248 TNRC6BQ9UPQ9 1833 aaKnown RBP8.49□□□□□ -1.05
SYNE1-204ENST00000367248 NUPR2A6NF83 97 aa8.49□□□□□ -1.05
SYNE1-204ENST00000367248 RBX1P62877 108 aa8.49□□□□□ -1.05
SYNE1-204ENST00000367248 C16orf95Q9H693 158 aa8.49□□□□□ -1.05
SYNE1-204ENST00000367248 NFE4Q86UQ8 179 aa8.48□□□□□ -1.05
SYNE1-204ENST00000367248 IGKV2-28A0A075B6P5 120 aa8.48□□□□□ -1.05
SYNE1-204ENST00000367248 IGKV2D-28P01615 120 aa8.48□□□□□ -1.05
SYNE1-204ENST00000367248 ZNF22P17026 224 aaPredicted RBP8.48□□□□□ -1.05
SYNE1-204ENST00000367248 Q6ZTC4 211 aa8.48□□□□□ -1.05
SYNE1-204ENST00000367248 EXPH5Q8NEV8 1989 aa8.48□□□□□ -1.05
SYNE1-204ENST00000367248 MRPS12O15235 138 aaKnown RBP8.48□□□□□ -1.05
SYNE1-204ENST00000367248 NPSP0C0P6 89 aa8.48□□□□□ -1.05
SYNE1-204ENST00000367248 LINC01620Q4KN68 170 aa8.48□□□□□ -1.05
SYNE1-204ENST00000367248 LRP4O75096 1905 aa8.48□□□□□ -1.05
SYNE1-204ENST00000367248 UBE2D4Q9Y2X8 147 aa8.47□□□□□ -1.05
SYNE1-204ENST00000367248 SYCNQ0VAF6 134 aa8.47□□□□□ -1.05
SYNE1-204ENST00000367248 A0A0J9YXY3 114 aa8.46□□□□□ -1.06
SYNE1-204ENST00000367248 SPANXCQ9NY87 97 aa8.46□□□□□ -1.06
SYNE1-204ENST00000367248 PYGO1Q9Y3Y4 419 aa8.46□□□□□ -1.06
SYNE1-204ENST00000367248 SPINK6Q6UWN8 80 aa8.45□□□□□ -1.06
SYNE1-204ENST00000367248 ANKRD29Q8N6D5 301 aa8.45□□□□□ -1.06
SYNE1-204ENST00000367248 PIK3CD-AS1Q5SR53 167 aa8.45□□□□□ -1.06
SYNE1-204ENST00000367248 MIAQ16674 131 aa8.45□□□□□ -1.06
SYNE1-204ENST00000367248 POLR2KP53803 58 aaKnown RBP8.44□□□□□ -1.06
SYNE1-204ENST00000367248 MRGPRG-AS1Q2M3A8 158 aa8.44□□□□□ -1.06
SYNE1-204ENST00000367248 RPL37AP8A6NKH3 93 aa8.44□□□□□ -1.06
SYNE1-204ENST00000367248 TSHBP01222 138 aa8.43□□□□□ -1.06
SYNE1-204ENST00000367248 COX7BP24311 80 aa8.43□□□□□ -1.06
SYNE1-204ENST00000367248 LELP1Q5T871 98 aa8.43□□□□□ -1.06
SYNE1-204ENST00000367248 NREPQ16612 68 aa8.43□□□□□ -1.06
SYNE1-204ENST00000367248 CITED1Q99966 193 aa8.43□□□□□ -1.06
SYNE1-204ENST00000367248 IGLV5-52A0A0A0MRZ9 124 aa8.42□□□□□ -1.06
SYNE1-204ENST00000367248 NRACQ8N912 160 aa8.42□□□□□ -1.06
SYNE1-204ENST00000367248 CNFNQ9BYD5 112 aa8.42□□□□□ -1.06
SYNE1-204ENST00000367248 IBA57-AS1B1ANH7 110 aa8.42□□□□□ -1.06
SYNE1-204ENST00000367248 IGKV2D-26A0A0A0MRZ7 120 aa8.42□□□□□ -1.06
SYNE1-204ENST00000367248 KRTAP24-1Q3LI83 254 aa8.42□□□□□ -1.06
SYNE1-204ENST00000367248 TMEM223A0PJW6 202 aa8.41□□□□□ -1.06
SYNE1-204ENST00000367248 TET2Q6N021 2002 aaPredicted RBP8.41□□□□□ -1.06
SYNE1-204ENST00000367248 H3BQ85 93 aa8.41□□□□□ -1.06
SYNE1-204ENST00000367248 UBE2D3P61077 147 aa8.41□□□□□ -1.06
SYNE1-204ENST00000367248 UBE2D2P62837 147 aa8.41□□□□□ -1.06
SYNE1-204ENST00000367248 CLEC2BQ92478 149 aa8.41□□□□□ -1.06
SYNE1-204ENST00000367248 F8P00451 2351 aa8.41□□□□□ -1.06
SYNE1-204ENST00000367248 CD164L2Q6UWJ8 174 aa8.41□□□□□ -1.06
SYNE1-204ENST00000367248 YPEL4Q96NS1 127 aa8.4□□□□□ -1.06
SYNE1-204ENST00000367248 IGLV9-49A0A0B4J1Y8 123 aa8.4□□□□□ -1.07
SYNE1-204ENST00000367248 JMJD7-PLA2G4BH0Y9G9 81 aa8.4□□□□□ -1.07
SYNE1-204ENST00000367248 C1orf158Q8N1D5 194 aa8.4□□□□□ -1.07
SYNE1-204ENST00000367248 CHKB-CPT1BH3BT56 60 aa8.4□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms