RNA–Protein interactions for RNA: ENST00000366766.6

CDC42BPA-203, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5 BASIC

Gene CDC42BPA, Length 10,610 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-203ENST00000366766 CRIP1P50238 77 aa9.02□□□□□ -0.97
CDC42BPA-203ENST00000366766 TP53TG3Q9ULZ0 132 aa9.01□□□□□ -0.97
CDC42BPA-203ENST00000366766 ZNF22P17026 224 aaPredicted RBP9.01□□□□□ -0.97
CDC42BPA-203ENST00000366766 CENPEQ02224 2701 aa9.01□□□□□ -0.97
CDC42BPA-203ENST00000366766 CFAP126Q5VTH2 177 aa9.01□□□□□ -0.97
CDC42BPA-203ENST00000366766 TTTY13Q9BZ97 58 aa9.01□□□□□ -0.97
CDC42BPA-203ENST00000366766 COX17Q14061 63 aa9.01□□□□□ -0.97
CDC42BPA-203ENST00000366766 DAND5Q8N907 189 aa9.01□□□□□ -0.97
CDC42BPA-203ENST00000366766 NDUFV3P56181 108 aaKnown RBP9□□□□□ -0.97
CDC42BPA-203ENST00000366766 DEFB135Q30KP9 77 aa9□□□□□ -0.97
CDC42BPA-203ENST00000366766 CITED2Q99967 270 aaPredicted RBP9□□□□□ -0.97
CDC42BPA-203ENST00000366766 MIFP14174 115 aa9□□□□□ -0.97
CDC42BPA-203ENST00000366766 UQCRQO14949 82 aa9□□□□□ -0.97
CDC42BPA-203ENST00000366766 CLEC2BQ92478 149 aa9□□□□□ -0.97
CDC42BPA-203ENST00000366766 USP24Q9UPU5 2620 aa9□□□□□ -0.97
CDC42BPA-203ENST00000366766 SPRY2O43597 315 aa9□□□□□ -0.97
CDC42BPA-203ENST00000366766 CLUHP3Q96NS8 147 aa9□□□□□ -0.97
CDC42BPA-203ENST00000366766 NDUFC2O95298 119 aa8.99□□□□□ -0.97
CDC42BPA-203ENST00000366766 Q9HAA7 133 aa8.99□□□□□ -0.97
CDC42BPA-203ENST00000366766 LINC00467Q9BRT7 94 aa8.99□□□□□ -0.97
CDC42BPA-203ENST00000366766 LINC00308Q8TCZ7 52 aa8.99□□□□□ -0.97
CDC42BPA-203ENST00000366766 ATP5EP56381 51 aaPredicted RBP8.99□□□□□ -0.97
CDC42BPA-203ENST00000366766 C20orf173Q96LM9 149 aa8.99□□□□□ -0.97
CDC42BPA-203ENST00000366766 KLK5Q9Y337 293 aaPredicted RBP8.99□□□□□ -0.97
CDC42BPA-203ENST00000366766 C9orf85Q96MD7 179 aa8.98□□□□□ -0.97
CDC42BPA-203ENST00000366766 IGHV4-31P0DP07 118 aa8.98□□□□□ -0.97
CDC42BPA-203ENST00000366766 FAM240AA0A1B0GVK7 77 aa8.98□□□□□ -0.97
CDC42BPA-203ENST00000366766 KIR2DL5BQ8NHK3 375 aa8.98□□□□□ -0.97
CDC42BPA-203ENST00000366766 KLK12Q9UKR0 248 aa8.98□□□□□ -0.97
CDC42BPA-203ENST00000366766 IGLV1-40P01703 118 aa8.98□□□□□ -0.97
CDC42BPA-203ENST00000366766 COL4A2P08572 1712 aa8.98□□□□□ -0.97
CDC42BPA-203ENST00000366766 IGHV3-33P01772 117 aa8.98□□□□□ -0.97
CDC42BPA-203ENST00000366766 REG3AQ06141 175 aa8.98□□□□□ -0.97
CDC42BPA-203ENST00000366766 RS1O15537 224 aa8.98□□□□□ -0.97
CDC42BPA-203ENST00000366766 CDKN2A-AS1Q9UH64 79 aa8.97□□□□□ -0.97
CDC42BPA-203ENST00000366766 TRBV6-8A0A0A6YYG3 113 aa8.97□□□□□ -0.97
CDC42BPA-203ENST00000366766 CRIP2P52943 208 aaPredicted RBP8.97□□□□□ -0.97
CDC42BPA-203ENST00000366766 POLR2KP53803 58 aaKnown RBP8.97□□□□□ -0.97
CDC42BPA-203ENST00000366766 C2orf91Q6ZV80 131 aa8.97□□□□□ -0.97
CDC42BPA-203ENST00000366766 IGHV3-30P01768 117 aa8.97□□□□□ -0.97
CDC42BPA-203ENST00000366766 IGHV3-30-5P0DP03 117 aa8.97□□□□□ -0.97
CDC42BPA-203ENST00000366766 NDUFC1O43677 76 aa8.97□□□□□ -0.97
CDC42BPA-203ENST00000366766 Q6ZTI0 123 aa8.96□□□□□ -0.98
CDC42BPA-203ENST00000366766 C22orf34Q6ZV56 151 aa8.96□□□□□ -0.98
CDC42BPA-203ENST00000366766 LINC01548A6NM66 108 aa8.95□□□□□ -0.98
CDC42BPA-203ENST00000366766 TEX49A0A1B0GTD5 131 aa8.95□□□□□ -0.98
CDC42BPA-203ENST00000366766 RNASE3P12724 160 aaKnown RBP8.95□□□□□ -0.98
CDC42BPA-203ENST00000366766 IGKV3D-7A0A0C4DH55 119 aa8.95□□□□□ -0.98
CDC42BPA-203ENST00000366766 DEFB105AQ8NG35 78 aa8.95□□□□□ -0.98
CDC42BPA-203ENST00000366766 WISP2O76076 250 aa8.94□□□□□ -0.98
CDC42BPA-203ENST00000366766 F8W735 103 aaPredicted RBP8.94□□□□□ -0.98
CDC42BPA-203ENST00000366766 DCANP1Q8TF63 244 aa8.94□□□□□ -0.98
CDC42BPA-203ENST00000366766 TRIAP1O43715 76 aa8.94□□□□□ -0.98
CDC42BPA-203ENST00000366766 UBE2AP49459 152 aa8.94□□□□□ -0.98
CDC42BPA-203ENST00000366766 TSHBP01222 138 aa8.94□□□□□ -0.98
CDC42BPA-203ENST00000366766 CHCHD10Q8WYQ3 142 aaPredicted RBP8.93□□□□□ -0.98
CDC42BPA-203ENST00000366766 C14orf132Q9NPU4 83 aa8.93□□□□□ -0.98
CDC42BPA-203ENST00000366766 CD164L2Q6UWJ8 174 aa8.93□□□□□ -0.98
CDC42BPA-203ENST00000366766 DEFB1P60022 68 aa8.93□□□□□ -0.98
CDC42BPA-203ENST00000366766 B9D2Q9BPU9 175 aa8.93□□□□□ -0.98
CDC42BPA-203ENST00000366766 IGKV2D-26A0A0A0MRZ7 120 aa8.93□□□□□ -0.98
CDC42BPA-203ENST00000366766 LST1O00453 97 aa8.93□□□□□ -0.98
CDC42BPA-203ENST00000366766 RNF183Q96D59 192 aa8.93□□□□□ -0.98
CDC42BPA-203ENST00000366766 LINC00269Q8N2A0 174 aa8.93□□□□□ -0.98
CDC42BPA-203ENST00000366766 UPK3BQ9BT76 320 aa8.92□□□□□ -0.98
CDC42BPA-203ENST00000366766 NDUFS5O43920 106 aa8.92□□□□□ -0.98
CDC42BPA-203ENST00000366766 SS18L2Q9UHA2 77 aa8.92□□□□□ -0.98
CDC42BPA-203ENST00000366766 C11orf45Q8TAV5 145 aa8.92□□□□□ -0.98
CDC42BPA-203ENST00000366766 BPY2O14599 106 aa8.91□□□□□ -0.98
CDC42BPA-203ENST00000366766 NCR3O14931 201 aa8.91□□□□□ -0.98
CDC42BPA-203ENST00000366766 MRPS12O15235 138 aaKnown RBP8.91□□□□□ -0.98
CDC42BPA-203ENST00000366766 MRAPQ8TCY5 172 aa8.91□□□□□ -0.98
CDC42BPA-203ENST00000366766 HILS1P60008 231 aa8.9□□□□□ -0.98
CDC42BPA-203ENST00000366766 CSDC2Q9Y534 153 aaKnown RBP8.9□□□□□ -0.99
CDC42BPA-203ENST00000366766 NRGNQ92686 78 aa8.9□□□□□ -0.99
CDC42BPA-203ENST00000366766 CEMP1Q6PRD7 247 aaPredicted RBP8.89□□□□□ -0.99
CDC42BPA-203ENST00000366766 CRYGDP07320 174 aa8.89□□□□□ -0.99
CDC42BPA-203ENST00000366766 PTH2Q96A98 100 aa8.89□□□□□ -0.99
CDC42BPA-203ENST00000366766 CHCHD7Q9BUK0 85 aa8.89□□□□□ -0.99
CDC42BPA-203ENST00000366766 DHRS4-AS1Q9P1J3 65 aa8.89□□□□□ -0.99
CDC42BPA-203ENST00000366766 UBE2D4Q9Y2X8 147 aa8.89□□□□□ -0.99
CDC42BPA-203ENST00000366766 Q6Q795 121 aa8.88□□□□□ -0.99
CDC42BPA-203ENST00000366766 SRCAPQ6ZRS2 3230 aa8.88□□□□□ -0.99
CDC42BPA-203ENST00000366766 MAPKAPK5-AS1Q8N8E1 139 aa8.88□□□□□ -0.99
CDC42BPA-203ENST00000366766 Q6ZSV7 163 aa8.88□□□□□ -0.99
CDC42BPA-203ENST00000366766 ZNF702PQ9H963 129 aa8.88□□□□□ -0.99
CDC42BPA-203ENST00000366766 IGIPA6NJ69 53 aa8.88□□□□□ -0.99
CDC42BPA-203ENST00000366766 RBX1P62877 108 aa8.88□□□□□ -0.99
CDC42BPA-203ENST00000366766 UBE2D1P51668 147 aa8.88□□□□□ -0.99
CDC42BPA-203ENST00000366766 DNAH12Q6ZR08 3092 aa8.87□□□□□ -0.99
CDC42BPA-203ENST00000366766 C3orf22Q8N5N4 141 aa8.87□□□□□ -0.99
CDC42BPA-203ENST00000366766 FAM110AQ9BQ89 295 aa8.87□□□□□ -0.99
CDC42BPA-203ENST00000366766 M0QXV9 152 aa8.87□□□□□ -0.99
CDC42BPA-203ENST00000366766 C4orf48Q5BLP8 95 aa8.87□□□□□ -0.99
CDC42BPA-203ENST00000366766 Q8IZM0 81 aa8.87□□□□□ -0.99
CDC42BPA-203ENST00000366766 LELP1Q5T871 98 aa8.86□□□□□ -0.99
CDC42BPA-203ENST00000366766 MT-ATP8P03928 68 aa8.86□□□□□ -0.99
CDC42BPA-203ENST00000366766 C19orf84I3L1E1 186 aa8.86□□□□□ -0.99
CDC42BPA-203ENST00000366766 PRB1P04280 392 aa8.86□□□□□ -0.99
CDC42BPA-203ENST00000366766 WFDC9Q8NEX5 89 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms