RNA–Protein interactions for RNA: ENST00000366304.3

HMGB1P39-201, Transcript of high mobility group box 1 pseudogene 39, humanhuman

BASIC

Gene HMGB1P39, Length 880 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P39-201ENST00000366304 Q0VG73 95 aa5.24□□□□□ -1.57
HMGB1P39-201ENST00000366304 PMCHL1Q16048 86 aa5.24□□□□□ -1.57
HMGB1P39-201ENST00000366304 MPV17L2Q567V2 206 aa5.24□□□□□ -1.57
HMGB1P39-201ENST00000366304 RPL7L1Q6DKI1 246 aaKnown RBP5.24□□□□□ -1.57
HMGB1P39-201ENST00000366304 KCNIP4Q6PIL6 250 aa5.24□□□□□ -1.57
HMGB1P39-201ENST00000366304 GTF2H5Q6ZYL4 71 aa5.24□□□□□ -1.57
HMGB1P39-201ENST00000366304 GTSF1Q8WW33 167 aa5.24□□□□□ -1.57
HMGB1P39-201ENST00000366304 PTH2Q96A98 100 aa5.24□□□□□ -1.57
HMGB1P39-201ENST00000366304 DPH3Q96FX2 82 aa5.24□□□□□ -1.57
HMGB1P39-201ENST00000366304 TRAV9-1A0A075B6T8 112 aa5.23□□□□□ -1.57
HMGB1P39-201ENST00000366304 TRAV21A0A0B4J279 112 aa5.23□□□□□ -1.57
HMGB1P39-201ENST00000366304 A0A0U1RQV1 116 aa5.23□□□□□ -1.57
HMGB1P39-201ENST00000366304 BATFQ16520 125 aa5.23□□□□□ -1.57
HMGB1P39-201ENST00000366304 COX19Q49B96 90 aa5.23□□□□□ -1.57
HMGB1P39-201ENST00000366304 REG3GQ6UW15 175 aa5.23□□□□□ -1.57
HMGB1P39-201ENST00000366304 SPINK6Q6UWN8 80 aa5.23□□□□□ -1.57
HMGB1P39-201ENST00000366304 ZFP2Q6ZN57 461 aa5.23□□□□□ -1.57
HMGB1P39-201ENST00000366304 OR10G9Q8NGN4 311 aa5.23□□□□□ -1.57
HMGB1P39-201ENST00000366304 C7orf33Q8WU49 177 aa5.23□□□□□ -1.57
HMGB1P39-201ENST00000366304 ATP5SQ99766 215 aa5.23□□□□□ -1.57
HMGB1P39-201ENST00000366304 IGHV3-64A0A075B6Q5 118 aa5.22□□□□□ -1.57
HMGB1P39-201ENST00000366304 IFNA1P01562 189 aa5.22□□□□□ -1.57
HMGB1P39-201ENST00000366304 CLPSL2Q6UWE3 100 aa5.22□□□□□ -1.57
HMGB1P39-201ENST00000366304 STPG4Q8N801 248 aa5.22□□□□□ -1.57
HMGB1P39-201ENST00000366304 OR10G7Q8NGN6 311 aa5.22□□□□□ -1.57
HMGB1P39-201ENST00000366304 CHCHD7Q9BUK0 85 aa5.22□□□□□ -1.57
HMGB1P39-201ENST00000366304 NPCDR1Q9BY65 106 aa5.22□□□□□ -1.57
HMGB1P39-201ENST00000366304 SMIM3Q9BZL3 60 aa5.22□□□□□ -1.57
HMGB1P39-201ENST00000366304 WDR61Q9GZS3 305 aaKnown RBP5.22□□□□□ -1.57
HMGB1P39-201ENST00000366304 KCNIP2Q9NS61 270 aa5.22□□□□□ -1.57
HMGB1P39-201ENST00000366304 hDV102S1A0JD36 115 aa5.21□□□□□ -1.58
HMGB1P39-201ENST00000366304 ZNF727A8MUV8 499 aa5.21□□□□□ -1.58
HMGB1P39-201ENST00000366304 IGLC3P0DOY3 106 aa5.21□□□□□ -1.58
HMGB1P39-201ENST00000366304 CSN1S1P47710 185 aa5.21□□□□□ -1.58
HMGB1P39-201ENST00000366304 CKS1BP61024 79 aa5.21□□□□□ -1.58
HMGB1P39-201ENST00000366304 MRPL54Q6P161 138 aaKnown RBP5.21□□□□□ -1.58
HMGB1P39-201ENST00000366304 Q6ZN92 141 aa5.21□□□□□ -1.58
HMGB1P39-201ENST00000366304 GOLT1AQ6ZVE7 132 aa5.21□□□□□ -1.58
HMGB1P39-201ENST00000366304 KCNS1Q96KK3 526 aa5.21□□□□□ -1.58
HMGB1P39-201ENST00000366304 SGK494Q96LW2 274 aa5.21□□□□□ -1.58
HMGB1P39-201ENST00000366304 PSMG3Q9BT73 122 aaPredicted RBP5.21□□□□□ -1.58
HMGB1P39-201ENST00000366304 SH3BGRL3Q9H299 93 aa5.21□□□□□ -1.58
HMGB1P39-201ENST00000366304 PRR34Q9NV39 138 aa5.21□□□□□ -1.58
HMGB1P39-201ENST00000366304 A0A087WWL8 130 aa5.2□□□□□ -1.58
HMGB1P39-201ENST00000366304 PGPA6NDG6 321 aa5.2□□□□□ -1.58
HMGB1P39-201ENST00000366304 TMEM262E9PQX1 116 aa5.2□□□□□ -1.58
HMGB1P39-201ENST00000366304 C17orf112F2Z3M2 114 aa5.2□□□□□ -1.58
HMGB1P39-201ENST00000366304 H7C1H1 209 aa5.2□□□□□ -1.58
HMGB1P39-201ENST00000366304 ANGP03950 147 aaKnown RBP5.2□□□□□ -1.58
HMGB1P39-201ENST00000366304 UBE2D3P61077 147 aa5.2□□□□□ -1.58
HMGB1P39-201ENST00000366304 UBE2D2P62837 147 aa5.2□□□□□ -1.58
HMGB1P39-201ENST00000366304 GNG5P63218 68 aa5.2□□□□□ -1.58
HMGB1P39-201ENST00000366304 CT83Q5H943 113 aa5.2□□□□□ -1.58
HMGB1P39-201ENST00000366304 FER1L6-AS1Q8NA97 138 aa5.2□□□□□ -1.58
HMGB1P39-201ENST00000366304 OR2G3Q8NGZ4 309 aa5.2□□□□□ -1.58
HMGB1P39-201ENST00000366304 PRSS3P2Q8NHM4 247 aa5.2□□□□□ -1.58
HMGB1P39-201ENST00000366304 SCGB1C1Q8TD33 95 aa5.2□□□□□ -1.58
HMGB1P39-201ENST00000366304 MRAP2Q96G30 205 aa5.2□□□□□ -1.58
HMGB1P39-201ENST00000366304 IGLV10-54A0A075B6I4 117 aa5.19□□□□□ -1.58
HMGB1P39-201ENST00000366304 A8MWV9 139 aa5.19□□□□□ -1.58
HMGB1P39-201ENST00000366304 CRPP02741 224 aa5.19□□□□□ -1.58
HMGB1P39-201ENST00000366304 CTRLP40313 264 aa5.19□□□□□ -1.58
HMGB1P39-201ENST00000366304 COX6A2Q02221 97 aa5.19□□□□□ -1.58
HMGB1P39-201ENST00000366304 MIAQ16674 131 aa5.19□□□□□ -1.58
HMGB1P39-201ENST00000366304 LINC00269Q8N2A0 174 aa5.19□□□□□ -1.58
HMGB1P39-201ENST00000366304 OR5A1Q8NGJ0 315 aa5.19□□□□□ -1.58
HMGB1P39-201ENST00000366304 CMTM2Q8TAZ6 248 aa5.19□□□□□ -1.58
HMGB1P39-201ENST00000366304 TRBV6-8A0A0A6YYG3 113 aa5.18□□□□□ -1.58
HMGB1P39-201ENST00000366304 IGKV3D-20A0A0C4DH25 116 aa5.18□□□□□ -1.58
HMGB1P39-201ENST00000366304 IGKV2-24A0A0C4DH68 120 aa5.18□□□□□ -1.58
HMGB1P39-201ENST00000366304 TMEM250H0YL14 139 aa5.18□□□□□ -1.58
HMGB1P39-201ENST00000366304 PDE6DO43924 150 aa5.18□□□□□ -1.58
HMGB1P39-201ENST00000366304 TSPAN13O95857 204 aa5.18□□□□□ -1.58
HMGB1P39-201ENST00000366304 UBE2L3P68036 154 aaKnown RBP5.18□□□□□ -1.58
HMGB1P39-201ENST00000366304 ADIRFQ15847 76 aa5.18□□□□□ -1.58
HMGB1P39-201ENST00000366304 SPATA45Q537H7 98 aa5.18□□□□□ -1.58
HMGB1P39-201ENST00000366304 FAM162BQ5T6X4 162 aa5.18□□□□□ -1.58
HMGB1P39-201ENST00000366304 NTM-AS1Q6ZSK4 140 aa5.18□□□□□ -1.58
HMGB1P39-201ENST00000366304 PRR26Q8N8Z3 221 aa5.18□□□□□ -1.58
HMGB1P39-201ENST00000366304 PMCHL2Q9BQD1 86 aa5.18□□□□□ -1.58
HMGB1P39-201ENST00000366304 A6NDN8 102 aa5.17□□□□□ -1.58
HMGB1P39-201ENST00000366304 GAGE10A6NGK3 116 aa5.17□□□□□ -1.58
HMGB1P39-201ENST00000366304 FAM213BQ8TBF2 198 aa5.17□□□□□ -1.58
HMGB1P39-201ENST00000366304 MBD3L1Q8WWY6 194 aa5.17□□□□□ -1.58
HMGB1P39-201ENST00000366304 AP1S3Q96PC3 154 aa5.17□□□□□ -1.58
HMGB1P39-201ENST00000366304 GFRA4Q9GZZ7 299 aa5.17□□□□□ -1.58
HMGB1P39-201ENST00000366304 VCX2Q9H322 139 aa5.17□□□□□ -1.58
HMGB1P39-201ENST00000366304 OTORQ9NRC9 128 aa5.17□□□□□ -1.58
HMGB1P39-201ENST00000366304 SPANXCQ9NY87 97 aa5.17□□□□□ -1.58
HMGB1P39-201ENST00000366304 PAM16Q9Y3D7 125 aa5.17□□□□□ -1.58
HMGB1P39-201ENST00000366304 TRAPPC1Q9Y5R8 145 aa5.17□□□□□ -1.58
HMGB1P39-201ENST00000366304 A0A096LNI7 61 aa5.16□□□□□ -1.58
HMGB1P39-201ENST00000366304 ATP6V0CP27449 155 aa5.16□□□□□ -1.58
HMGB1P39-201ENST00000366304 SEC11AP67812 179 aa5.16□□□□□ -1.58
HMGB1P39-201ENST00000366304 PRR4Q16378 134 aa5.16□□□□□ -1.58
HMGB1P39-201ENST00000366304 PIK3CD-AS1Q5SR53 167 aa5.16□□□□□ -1.58
HMGB1P39-201ENST00000366304 FAM74A4Q5TZK3 123 aa5.16□□□□□ -1.58
HMGB1P39-201ENST00000366304 FA2HQ7L5A8 372 aa5.16□□□□□ -1.58
HMGB1P39-201ENST00000366304 C15orf56Q8N910 161 aa5.16□□□□□ -1.58
HMGB1P39-201ENST00000366304 TRBV7-3A0A075B6L6 115 aa5.15□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms