RNA–Protein interactions for RNA: ENST00000362942.1

RNU6-428P-201, Transcript of RNA, U6 small nuclear 428, pseudogene, humanhuman

BASIC

Gene RNU6-428P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-428P-201ENST00000362942 KRTAP20-1Q3LI63 56 aa-0.52□□□□□ -2.49
RNU6-428P-201ENST00000362942 PIGYQ3MUY2 71 aa-0.52□□□□□ -2.49
RNU6-428P-201ENST00000362942 TMEM191AQ9H0A3 160 aa-0.52□□□□□ -2.49
RNU6-428P-201ENST00000362942 HECTD4Q9Y4D8 3996 aa-0.52□□□□□ -2.49
RNU6-428P-201ENST00000362942 DOCK2Q92608 1830 aa-0.52□□□□□ -2.49
RNU6-428P-201ENST00000362942 FXYD6-FXYD2A0A087WZ82 144 aa-0.53□□□□□ -2.49
RNU6-428P-201ENST00000362942 M0R135 149 aa-0.53□□□□□ -2.49
RNU6-428P-201ENST00000362942 COX17Q14061 63 aa-0.53□□□□□ -2.49
RNU6-428P-201ENST00000362942 TSTD1Q8NFU3 115 aa-0.53□□□□□ -2.49
RNU6-428P-201ENST00000362942 COPS9Q8WXC6 57 aa-0.53□□□□□ -2.49
RNU6-428P-201ENST00000362942 TPT1P8Q9HAU6 139 aa-0.53□□□□□ -2.49
RNU6-428P-201ENST00000362942 CCDC167Q9P0B6 97 aa-0.53□□□□□ -2.49
RNU6-428P-201ENST00000362942 CEP152O94986 1710 aa-0.53□□□□□ -2.49
RNU6-428P-201ENST00000362942 PKD1L1Q8TDX9 2849 aa-0.53□□□□□ -2.49
RNU6-428P-201ENST00000362942 CHD8Q9HCK8 2581 aa-0.53□□□□□ -2.5
RNU6-428P-201ENST00000362942 CSMD3Q7Z407 3707 aa-0.54□□□□□ -2.5
RNU6-428P-201ENST00000362942 SBF2Q86WG5 1849 aa-0.54□□□□□ -2.5
RNU6-428P-201ENST00000362942 MYO18BQ8IUG5 2567 aa-0.54□□□□□ -2.5
RNU6-428P-201ENST00000362942 SPAARA0A1B0GVQ0 90 aa-0.54□□□□□ -2.5
RNU6-428P-201ENST00000362942 SMCO1Q147U7 214 aa-0.54□□□□□ -2.5
RNU6-428P-201ENST00000362942 LENEPQ9Y5L5 61 aa-0.54□□□□□ -2.5
RNU6-428P-201ENST00000362942 PIEZO2Q9H5I5 2752 aa-0.54□□□□□ -2.5
RNU6-428P-201ENST00000362942 APC2O95996 2303 aa-0.54□□□□□ -2.5
RNU6-428P-201ENST00000362942 FAT3Q8TDW7 4589 aa-0.54□□□□□ -2.5
RNU6-428P-201ENST00000362942 PATJQ8NI35 1801 aa-0.54□□□□□ -2.5
RNU6-428P-201ENST00000362942 TRAV13-2A0A0B4J235 113 aa-0.55□□□□□ -2.5
RNU6-428P-201ENST00000362942 HCG22E2RYF7 251 aa-0.55□□□□□ -2.5
RNU6-428P-201ENST00000362942 ARPC5O15511 151 aa-0.55□□□□□ -2.5
RNU6-428P-201ENST00000362942 RPS25P62851 125 aaKnown RBP-0.55□□□□□ -2.5
RNU6-428P-201ENST00000362942 C10orf128Q5T292 105 aa-0.55□□□□□ -2.5
RNU6-428P-201ENST00000362942 C12orf73Q69YU5 71 aa-0.55□□□□□ -2.5
RNU6-428P-201ENST00000362942 SPAG11AQ6PDA7 123 aa-0.55□□□□□ -2.5
RNU6-428P-201ENST00000362942 C2CD3Q4AC94 2353 aa-0.55□□□□□ -2.5
RNU6-428P-201ENST00000362942 MRC1P22897 1456 aa-0.55□□□□□ -2.5
RNU6-428P-201ENST00000362942 FLGP20930 4061 aaPredicted RBP-0.55□□□□□ -2.5
RNU6-428P-201ENST00000362942 BSNQ9UPA5 3926 aa-0.56□□□□□ -2.5
RNU6-428P-201ENST00000362942 LAMC1P11047 1609 aa-0.56□□□□□ -2.5
RNU6-428P-201ENST00000362942 PRRC2CQ9Y520 2896 aaKnown RBP-0.56□□□□□ -2.5
RNU6-428P-201ENST00000362942 TSC2P49815 1807 aa-0.56□□□□□ -2.5
RNU6-428P-201ENST00000362942 PLCE1Q9P212 2302 aa-0.56□□□□□ -2.5
RNU6-428P-201ENST00000362942 HUWE1Q7Z6Z7 4374 aaKnown RBP-0.56□□□□□ -2.5
RNU6-428P-201ENST00000362942 TRBV6-1A0A0K0K1D8 114 aa-0.56□□□□□ -2.5
RNU6-428P-201ENST00000362942 K7EQZ3 153 aa-0.56□□□□□ -2.5
RNU6-428P-201ENST00000362942 TMEM170BQ5T4T1 132 aa-0.56□□□□□ -2.5
RNU6-428P-201ENST00000362942 V9GYH0 126 aa-0.56□□□□□ -2.5
RNU6-428P-201ENST00000362942 ATRQ13535 2644 aa-0.56□□□□□ -2.5
RNU6-428P-201ENST00000362942 MYOM3Q5VTT5 1437 aa-0.56□□□□□ -2.5
RNU6-428P-201ENST00000362942 CHD6Q8TD26 2715 aa-0.57□□□□□ -2.5
RNU6-428P-201ENST00000362942 HTTP42858 3142 aa-0.57□□□□□ -2.5
RNU6-428P-201ENST00000362942 APOC3P02656 99 aa-0.57□□□□□ -2.5
RNU6-428P-201ENST00000362942 SPRR2BP35325 72 aa-0.57□□□□□ -2.5
RNU6-428P-201ENST00000362942 DEFA5Q01523 94 aa-0.57□□□□□ -2.5
RNU6-428P-201ENST00000362942 ANP32BQ92688 251 aaKnown RBP-0.57□□□□□ -2.5
RNU6-428P-201ENST00000362942 AGPAT4-IT1Q9H0P7 198 aa-0.57□□□□□ -2.5
RNU6-428P-201ENST00000362942 PAPPAQ13219 1627 aa-0.57□□□□□ -2.5
RNU6-428P-201ENST00000362942 ITPR1Q14643 2758 aa-0.57□□□□□ -2.5
RNU6-428P-201ENST00000362942 MAP1BP46821 2468 aaKnown RBP-0.58□□□□□ -2.5
RNU6-428P-201ENST00000362942 WDR7Q9Y4E6 1490 aa-0.58□□□□□ -2.5
RNU6-428P-201ENST00000362942 WNK1Q9H4A3 2382 aa-0.58□□□□□ -2.5
RNU6-428P-201ENST00000362942 I3L2K1 104 aa-0.58□□□□□ -2.5
RNU6-428P-201ENST00000362942 TPPP2P59282 170 aa-0.58□□□□□ -2.5
RNU6-428P-201ENST00000362942 SMIM21Q3B7S5 101 aa-0.58□□□□□ -2.5
RNU6-428P-201ENST00000362942 TTC9CQ8N5M4 171 aa-0.58□□□□□ -2.5
RNU6-428P-201ENST00000362942 PPIP5K1Q6PFW1 1433 aa-0.58□□□□□ -2.5
RNU6-428P-201ENST00000362942 DOCK1Q14185 1865 aa-0.58□□□□□ -2.5
RNU6-428P-201ENST00000362942 KIF21AQ7Z4S6 1674 aa-0.59□□□□□ -2.5
RNU6-428P-201ENST00000362942 ZNF236Q9UL36 1845 aa-0.59□□□□□ -2.5
RNU6-428P-201ENST00000362942 LOC730098B7Z3J9 87 aa-0.59□□□□□ -2.5
RNU6-428P-201ENST00000362942 UQCR11O14957 56 aa-0.59□□□□□ -2.5
RNU6-428P-201ENST00000362942 COX6B1P14854 86 aa-0.59□□□□□ -2.5
RNU6-428P-201ENST00000362942 Q6JHZ5 121 aa-0.59□□□□□ -2.5
RNU6-428P-201ENST00000362942 BAGE2Q86Y30 109 aa-0.59□□□□□ -2.5
RNU6-428P-201ENST00000362942 MAFIPQ8WZ33 124 aa-0.59□□□□□ -2.5
RNU6-428P-201ENST00000362942 SDF2Q99470 211 aa-0.59□□□□□ -2.5
RNU6-428P-201ENST00000362942 PFDN5Q99471 154 aa-0.59□□□□□ -2.5
RNU6-428P-201ENST00000362942 PAIP2BQ9ULR5 123 aaKnown RBP-0.59□□□□□ -2.5
RNU6-428P-201ENST00000362942 USF3Q68DE3 2245 aa-0.59□□□□□ -2.5
RNU6-428P-201ENST00000362942 LAMA3Q16787 3333 aa-0.59□□□□□ -2.5
RNU6-428P-201ENST00000362942 ARAP2Q8WZ64 1704 aa-0.59□□□□□ -2.5
RNU6-428P-201ENST00000362942 RIF1Q5UIP0 2472 aaKnown RBP-0.59□□□□□ -2.5
RNU6-428P-201ENST00000362942 CCDC168Q8NDH2 2452 aa-0.59□□□□□ -2.5
RNU6-428P-201ENST00000362942 PI4KAP42356 2102 aa-0.59□□□□□ -2.5
RNU6-428P-201ENST00000362942 MYO7BQ6PIF6 2116 aa-0.59□□□□□ -2.5
RNU6-428P-201ENST00000362942 ANKRD11Q6UB99 2663 aaPredicted RBP-0.6□□□□□ -2.5
RNU6-428P-201ENST00000362942 PCNX1Q96RV3 2341 aa-0.6□□□□□ -2.51
RNU6-428P-201ENST00000362942 FAT2Q9NYQ8 4349 aa-0.6□□□□□ -2.51
RNU6-428P-201ENST00000362942 DPH3Q96FX2 82 aa-0.6□□□□□ -2.51
RNU6-428P-201ENST00000362942 AMELXQ99217 191 aa-0.6□□□□□ -2.51
RNU6-428P-201ENST00000362942 PDCD10Q9BUL8 212 aa-0.6□□□□□ -2.51
RNU6-428P-201ENST00000362942 ITPR2Q14571 2701 aa-0.6□□□□□ -2.51
RNU6-428P-201ENST00000362942 GRIN2AQ12879 1464 aa-0.61□□□□□ -2.51
RNU6-428P-201ENST00000362942 GCN1Q92616 2671 aaKnown RBP-0.61□□□□□ -2.51
RNU6-428P-201ENST00000362942 MGAM2Q2M2H8 2515 aa-0.61□□□□□ -2.51
RNU6-428P-201ENST00000362942 LAMA1P25391 3075 aa-0.61□□□□□ -2.51
RNU6-428P-201ENST00000362942 CFTRP13569 1480 aa-0.61□□□□□ -2.51
RNU6-428P-201ENST00000362942 SHANK2Q9UPX8 1470 aa-0.61□□□□□ -2.51
RNU6-428P-201ENST00000362942 EYSQ5T1H1 3165 aa-0.61□□□□□ -2.51
RNU6-428P-201ENST00000362942 AKAP13Q12802 2813 aa-0.62□□□□□ -2.51
RNU6-428P-201ENST00000362942 F8VRH5 84 aa-0.62□□□□□ -2.51
RNU6-428P-201ENST00000362942 SPINK4O60575 86 aa-0.62□□□□□ -2.51
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms