RNA–Protein interactions for RNA: ENST00000361530.10

CNKSR1-201, Transcript of connector enhancer of kinase suppressor of Ras 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CNKSR1, Length 2,625 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1-201ENST00000361530 GAGE2EQ4V326 116 aa11.26□□□□□ -0.61
CNKSR1-201ENST00000361530 PEMTQ9UBM1 199 aa11.26□□□□□ -0.61
CNKSR1-201ENST00000361530 GAGE2DQ9UEU5 116 aa11.26□□□□□ -0.61
CNKSR1-201ENST00000361530 UBR5O95071 2799 aaPredicted RBP11.26□□□□□ -0.61
CNKSR1-201ENST00000361530 NF1P21359 2839 aa11.25□□□□□ -0.61
CNKSR1-201ENST00000361530 DEFB114Q30KQ6 69 aa11.25□□□□□ -0.61
CNKSR1-201ENST00000361530 LINC01620Q4KN68 170 aa11.25□□□□□ -0.61
CNKSR1-201ENST00000361530 ADAMTSL4-AS1Q5T5F5 129 aa11.25□□□□□ -0.61
CNKSR1-201ENST00000361530 LINC00467Q9BRT7 94 aa11.25□□□□□ -0.61
CNKSR1-201ENST00000361530 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.25□□□□□ -0.61
CNKSR1-201ENST00000361530 TEX49A0A1B0GTD5 131 aa11.25□□□□□ -0.61
CNKSR1-201ENST00000361530 C4orf3Q8WVX3 66 aa11.25□□□□□ -0.61
CNKSR1-201ENST00000361530 TRAV4A0A0B4J268 109 aa11.24□□□□□ -0.61
CNKSR1-201ENST00000361530 IGHV1-58A0A0C4DH39 117 aa11.24□□□□□ -0.61
CNKSR1-201ENST00000361530 DYNLRB2Q8TF09 96 aa11.24□□□□□ -0.61
CNKSR1-201ENST00000361530 BBC3Q96PG8 261 aaPredicted RBP11.24□□□□□ -0.61
CNKSR1-201ENST00000361530 SONP18583 2426 aaKnown RBP11.24□□□□□ -0.61
CNKSR1-201ENST00000361530 CRLF1O75462 422 aa11.24□□□□□ -0.61
CNKSR1-201ENST00000361530 PIK3CD-AS1Q5SR53 167 aa11.24□□□□□ -0.61
CNKSR1-201ENST00000361530 WIPF1O43516 503 aa11.23□□□□□ -0.61
CNKSR1-201ENST00000361530 IGHV3-53P01767 116 aa11.23□□□□□ -0.61
CNKSR1-201ENST00000361530 NPC2P61916 151 aa11.23□□□□□ -0.61
CNKSR1-201ENST00000361530 XCL2Q9UBD3 114 aa11.23□□□□□ -0.61
CNKSR1-201ENST00000361530 NDUFA12Q9UI09 145 aa11.23□□□□□ -0.61
CNKSR1-201ENST00000361530 WNK1Q9H4A3 2382 aa11.23□□□□□ -0.61
CNKSR1-201ENST00000361530 TINCRA0A1B0GVN0 87 aa11.22□□□□□ -0.61
CNKSR1-201ENST00000361530 TRIAP1O43715 76 aa11.22□□□□□ -0.61
CNKSR1-201ENST00000361530 VSIG2Q96IQ7 327 aa11.22□□□□□ -0.61
CNKSR1-201ENST00000361530 SPANXA1Q9NS26 97 aa11.22□□□□□ -0.61
CNKSR1-201ENST00000361530 BEAN1Q3B7T3 259 aa11.22□□□□□ -0.61
CNKSR1-201ENST00000361530 TRAV8-4A0A0B4J246 113 aa11.22□□□□□ -0.61
CNKSR1-201ENST00000361530 TTC32Q5I0X7 151 aa11.22□□□□□ -0.61
CNKSR1-201ENST00000361530 Q96MF0 132 aa11.22□□□□□ -0.61
CNKSR1-201ENST00000361530 NIPBLQ6KC79 2804 aaeCLIP11.21□□□□□ -0.61
CNKSR1-201ENST00000361530 INSP01308 110 aa11.21□□□□□ -0.61
CNKSR1-201ENST00000361530 DEFB113Q30KQ7 82 aa11.21□□□□□ -0.61
CNKSR1-201ENST00000361530 RS1O15537 224 aa11.21□□□□□ -0.62
CNKSR1-201ENST00000361530 ODF3L2Q3SX64 289 aa11.21□□□□□ -0.62
CNKSR1-201ENST00000361530 APCP25054 2843 aa11.2□□□□□ -0.62
CNKSR1-201ENST00000361530 NDUFV3P56181 108 aaKnown RBP11.2□□□□□ -0.62
CNKSR1-201ENST00000361530 C2orf82Q6UX34 121 aa11.2□□□□□ -0.62
CNKSR1-201ENST00000361530 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.2□□□□□ -0.62
CNKSR1-201ENST00000361530 C11orf44Q8N8P7 122 aa11.2□□□□□ -0.62
CNKSR1-201ENST00000361530 IGHV3OR16-12A0A075B7B8 117 aa11.2□□□□□ -0.62
CNKSR1-201ENST00000361530 NBPF19A0A087WUL8 3843 aa11.2□□□□□ -0.62
CNKSR1-201ENST00000361530 TRBV10-2A0A0K0K1G8 114 aa11.2□□□□□ -0.62
CNKSR1-201ENST00000361530 Q6ZSV7 163 aa11.2□□□□□ -0.62
CNKSR1-201ENST00000361530 CDKN2A-AS1Q9UH64 79 aa11.2□□□□□ -0.62
CNKSR1-201ENST00000361530 UBE2WQ96B02 151 aa11.19□□□□□ -0.62
CNKSR1-201ENST00000361530 DNAJC30Q96LL9 226 aa11.19□□□□□ -0.62
CNKSR1-201ENST00000361530 NOTCH3Q9UM47 2321 aa11.18□□□□□ -0.62
CNKSR1-201ENST00000361530 TRBV30A0A0K0K1B3 111 aa11.18□□□□□ -0.62
CNKSR1-201ENST00000361530 C1orf158Q8N1D5 194 aa11.18□□□□□ -0.62
CNKSR1-201ENST00000361530 C15orf53Q8NAA6 179 aa11.18□□□□□ -0.62
CNKSR1-201ENST00000361530 SMIM9A6NGZ8 99 aa11.18□□□□□ -0.62
CNKSR1-201ENST00000361530 SPANXDQ9BXN6 97 aa11.18□□□□□ -0.62
CNKSR1-201ENST00000361530 SPANXCQ9NY87 97 aa11.18□□□□□ -0.62
CNKSR1-201ENST00000361530 SETD2Q9BYW2 2564 aaPredicted RBP11.18□□□□□ -0.62
CNKSR1-201ENST00000361530 IFITM1P13164 125 aa11.17□□□□□ -0.62
CNKSR1-201ENST00000361530 COX6A2Q02221 97 aa11.17□□□□□ -0.62
CNKSR1-201ENST00000361530 ICOSQ9Y6W8 199 aa11.17□□□□□ -0.62
CNKSR1-201ENST00000361530 ITPR3Q14573 2671 aa11.17□□□□□ -0.62
CNKSR1-201ENST00000361530 A0A1W2PRX2 142 aa11.17□□□□□ -0.62
CNKSR1-201ENST00000361530 MIAQ16674 131 aa11.17□□□□□ -0.62
CNKSR1-201ENST00000361530 KRTAP1-3Q8IUG1 177 aa11.17□□□□□ -0.62
CNKSR1-201ENST00000361530 CLEC2BQ92478 149 aa11.17□□□□□ -0.62
CNKSR1-201ENST00000361530 DAND5Q8N907 189 aa11.16□□□□□ -0.62
CNKSR1-201ENST00000361530 COX6CP09669 75 aa11.16□□□□□ -0.62
CNKSR1-201ENST00000361530 CITED2Q99967 270 aaPredicted RBP11.16□□□□□ -0.62
CNKSR1-201ENST00000361530 C2CD3Q4AC94 2353 aa11.16□□□□□ -0.62
CNKSR1-201ENST00000361530 TRGV1A0A0A0MS02 117 aa11.15□□□□□ -0.62
CNKSR1-201ENST00000361530 H7C423 109 aa11.15□□□□□ -0.62
CNKSR1-201ENST00000361530 LINC00694P0DN24 101 aa11.15□□□□□ -0.62
CNKSR1-201ENST00000361530 RPL13AP40429 203 aaKnown RBP11.15□□□□□ -0.62
CNKSR1-201ENST00000361530 TMEM101Q96IK0 257 aa11.15□□□□□ -0.62
CNKSR1-201ENST00000361530 NDUFA7O95182 113 aa11.15□□□□□ -0.62
CNKSR1-201ENST00000361530 DGAT2L7PQ6IED9 249 aa11.15□□□□□ -0.62
CNKSR1-201ENST00000361530 STHQ8IWL8 128 aa11.15□□□□□ -0.62
CNKSR1-201ENST00000361530 ZNF843Q8N446 348 aa11.14□□□□□ -0.63
CNKSR1-201ENST00000361530 CCDC168Q8NDH2 2452 aa11.14□□□□□ -0.63
CNKSR1-201ENST00000361530 JMJD1CQ15652 2540 aa11.14□□□□□ -0.63
CNKSR1-201ENST00000361530 IGLV5-45A0A087WSX0 123 aa11.13□□□□□ -0.63
CNKSR1-201ENST00000361530 TIRAPP58753 221 aa11.13□□□□□ -0.63
CNKSR1-201ENST00000361530 Q6ZTI0 123 aa11.13□□□□□ -0.63
CNKSR1-201ENST00000361530 IL17DQ8TAD2 202 aa11.13□□□□□ -0.63
CNKSR1-201ENST00000361530 LRRC75A-AS1Q8N1F1 130 aa11.13□□□□□ -0.63
CNKSR1-201ENST00000361530 SETXQ7Z333 2677 aaKnown RBP11.12□□□□□ -0.63
CNKSR1-201ENST00000361530 MEIG1Q5JSS6 88 aa11.12□□□□□ -0.63
CNKSR1-201ENST00000361530 LINC00242Q5T6M2 205 aa11.12□□□□□ -0.63
CNKSR1-201ENST00000361530 NTM-AS1Q6ZSK4 140 aa11.12□□□□□ -0.63
CNKSR1-201ENST00000361530 C3orf56Q8N813 242 aa11.12□□□□□ -0.63
CNKSR1-201ENST00000361530 DNAJC9-AS1A6NH13 148 aa11.11□□□□□ -0.63
CNKSR1-201ENST00000361530 CCL24O00175 119 aa11.1□□□□□ -0.63
CNKSR1-201ENST00000361530 NDUFA1O15239 70 aa11.1□□□□□ -0.63
CNKSR1-201ENST00000361530 ZNF625Q96I27 306 aaPredicted RBP11.1□□□□□ -0.63
CNKSR1-201ENST00000361530 ESM1Q9NQ30 184 aa11.1□□□□□ -0.63
CNKSR1-201ENST00000361530 LOC107984640A0A0U1RRK4 108 aa11.1□□□□□ -0.63
CNKSR1-201ENST00000361530 FLNAP21333 2647 aaKnown RBP11.1□□□□□ -0.63
CNKSR1-201ENST00000361530 TIMM17BO60830 172 aa11.09□□□□□ -0.63
CNKSR1-201ENST00000361530 IGLV5-39A0A0G2JS06 123 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms