RNA–Protein interactions for RNA: ENST00000361168.9

CLK2-202, Transcript of CDC like kinase 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLK2, Length 1,934 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK2-202ENST00000361168 HIST1H2BKO60814 126 aa11.95□□□□□ -0.5
CLK2-202ENST00000361168 HIST1H2BJP06899 126 aa11.95□□□□□ -0.5
CLK2-202ENST00000361168 HIST1H2BOP23527 126 aa11.95□□□□□ -0.5
CLK2-202ENST00000361168 HIST1H2BBP33778 126 aa11.95□□□□□ -0.5
CLK2-202ENST00000361168 HIST1H2BDP58876 126 aa11.95□□□□□ -0.5
CLK2-202ENST00000361168 HIST1H2BCP62807 126 aa11.95□□□□□ -0.5
CLK2-202ENST00000361168 HIST2H2BEQ16778 126 aa11.95□□□□□ -0.5
CLK2-202ENST00000361168 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.95□□□□□ -0.5
CLK2-202ENST00000361168 ZC2HC1BQ5TFG8 222 aa11.95□□□□□ -0.5
CLK2-202ENST00000361168 MAPKAPK5-AS1Q8N8E1 139 aa11.95□□□□□ -0.5
CLK2-202ENST00000361168 HIST1H2BHQ93079 126 aa11.95□□□□□ -0.5
CLK2-202ENST00000361168 HIST1H2BNQ99877 126 aa11.95□□□□□ -0.5
CLK2-202ENST00000361168 HIST1H2BMQ99879 126 aa11.95□□□□□ -0.5
CLK2-202ENST00000361168 PKHD1P08F94 4074 aa11.95□□□□□ -0.5
CLK2-202ENST00000361168 NUPR1O60356 82 aa11.94□□□□□ -0.5
CLK2-202ENST00000361168 PKIAP61925 76 aa11.94□□□□□ -0.5
CLK2-202ENST00000361168 HECTD4Q9Y4D8 3996 aa11.94□□□□□ -0.5
CLK2-202ENST00000361168 K7EMI3 77 aa11.94□□□□□ -0.5
CLK2-202ENST00000361168 ZNF25P17030 456 aaPredicted RBP11.94□□□□□ -0.5
CLK2-202ENST00000361168 DGAT2L7PQ6IED9 249 aa11.94□□□□□ -0.5
CLK2-202ENST00000361168 ZNF664Q8N3J9 261 aa11.94□□□□□ -0.5
CLK2-202ENST00000361168 TMEM101Q96IK0 257 aa11.94□□□□□ -0.5
CLK2-202ENST00000361168 CYSLTR1Q9Y271 337 aa11.94□□□□□ -0.5
CLK2-202ENST00000361168 CRPP02741 224 aa11.93□□□□□ -0.5
CLK2-202ENST00000361168 BAGE3Q86Y29 109 aa11.93□□□□□ -0.5
CLK2-202ENST00000361168 Q0VG73 95 aa11.92□□□□□ -0.5
CLK2-202ENST00000361168 TMEM18Q96B42 140 aa11.92□□□□□ -0.5
CLK2-202ENST00000361168 CSDC2Q9Y534 153 aaKnown RBP11.92□□□□□ -0.5
CLK2-202ENST00000361168 EPPK1P58107 5090 aaKnown RBP11.92□□□□□ -0.5
CLK2-202ENST00000361168 IGKV2D-24A0A075B6R9 120 aa11.92□□□□□ -0.5
CLK2-202ENST00000361168 TRAV8-3A0A0A6YYJ7 113 aa11.92□□□□□ -0.5
CLK2-202ENST00000361168 IGIPA6NJ69 53 aa11.92□□□□□ -0.5
CLK2-202ENST00000361168 SERF1AO75920 110 aa11.92□□□□□ -0.5
CLK2-202ENST00000361168 TNP2Q05952 138 aa11.92□□□□□ -0.5
CLK2-202ENST00000361168 TOMM6Q96B49 74 aa11.92□□□□□ -0.5
CLK2-202ENST00000361168 IGLV4-3A0A075B6K6 122 aa11.91□□□□□ -0.5
CLK2-202ENST00000361168 FAM19A2Q8N3H0 131 aa11.91□□□□□ -0.5
CLK2-202ENST00000361168 TIMM21Q9BVV7 248 aa11.91□□□□□ -0.5
CLK2-202ENST00000361168 KRTAP26-1Q6PEX3 210 aa11.9□□□□□ -0.5
CLK2-202ENST00000361168 SPANXA1Q9NS26 97 aa11.9□□□□□ -0.5
CLK2-202ENST00000361168 WFDC2Q14508 124 aa11.89□□□□□ -0.51
CLK2-202ENST00000361168 MIAQ16674 131 aa11.89□□□□□ -0.51
CLK2-202ENST00000361168 PYGO1Q9Y3Y4 419 aa11.89□□□□□ -0.51
CLK2-202ENST00000361168 LECT2O14960 151 aa11.88□□□□□ -0.51
CLK2-202ENST00000361168 TRAV13-1A0A0B4J241 112 aa11.88□□□□□ -0.51
CLK2-202ENST00000361168 LINC00959A0A1B0GUT2 108 aa11.88□□□□□ -0.51
CLK2-202ENST00000361168 RAB5BP61020 215 aa11.88□□□□□ -0.51
CLK2-202ENST00000361168 LINC00173Q6ZV60 143 aa11.88□□□□□ -0.51
CLK2-202ENST00000361168 SCGB3A1Q96QR1 104 aa11.88□□□□□ -0.51
CLK2-202ENST00000361168 CHCHD1Q96BP2 118 aaKnown RBP11.87□□□□□ -0.51
CLK2-202ENST00000361168 C1orf43Q9BWL3 253 aa11.87□□□□□ -0.51
CLK2-202ENST00000361168 HBDP02042 147 aa11.86□□□□□ -0.51
CLK2-202ENST00000361168 MRPS36P82909 103 aaKnown RBP11.86□□□□□ -0.51
CLK2-202ENST00000361168 NFE4Q86UQ8 179 aa11.86□□□□□ -0.51
CLK2-202ENST00000361168 PRSS29PA6NIE9 313 aa11.86□□□□□ -0.51
CLK2-202ENST00000361168 PSCAO43653 123 aa11.86□□□□□ -0.51
CLK2-202ENST00000361168 FUSP35637 526 aaKnown RBP eCLIP11.86□□□□□ -0.51
CLK2-202ENST00000361168 XCL1P47992 114 aa11.86□□□□□ -0.51
CLK2-202ENST00000361168 ERASQ7Z444 233 aa11.86□□□□□ -0.51
CLK2-202ENST00000361168 TMEM141Q96I45 108 aa11.86□□□□□ -0.51
CLK2-202ENST00000361168 HSBP1O75506 76 aa11.85□□□□□ -0.51
CLK2-202ENST00000361168 BAALCQ8WXS3 180 aa11.85□□□□□ -0.51
CLK2-202ENST00000361168 CHCHD10Q8WYQ3 142 aaPredicted RBP11.85□□□□□ -0.51
CLK2-202ENST00000361168 CCL25O15444 150 aa11.84□□□□□ -0.51
CLK2-202ENST00000361168 TIMM17AQ99595 171 aa11.84□□□□□ -0.51
CLK2-202ENST00000361168 LRCOL1A6NCL2 159 aa11.84□□□□□ -0.51
CLK2-202ENST00000361168 C1orf196B1AJZ1 125 aa11.84□□□□□ -0.51
CLK2-202ENST00000361168 PDZD11Q5EBL8 140 aa11.84□□□□□ -0.51
CLK2-202ENST00000361168 IFITM10A6NMD0 228 aa11.83□□□□□ -0.52
CLK2-202ENST00000361168 SMAGPQ0VAQ4 97 aa11.83□□□□□ -0.52
CLK2-202ENST00000361168 AMELXQ99217 191 aa11.83□□□□□ -0.52
CLK2-202ENST00000361168 DNAH5Q8TE73 4624 aa11.83□□□□□ -0.52
CLK2-202ENST00000361168 TRAV8-4A0A0B4J246 113 aa11.82□□□□□ -0.52
CLK2-202ENST00000361168 GAGE12HA6NDE8 117 aa11.82□□□□□ -0.52
CLK2-202ENST00000361168 G0S2P27469 103 aa11.82□□□□□ -0.52
CLK2-202ENST00000361168 TEX43Q6ZNM6 134 aa11.82□□□□□ -0.52
CLK2-202ENST00000361168 TM2D2Q9BX73 214 aa11.82□□□□□ -0.52
CLK2-202ENST00000361168 VCX2Q9H322 139 aa11.82□□□□□ -0.52
CLK2-202ENST00000361168 A0A087WTM6 91 aa11.81□□□□□ -0.52
CLK2-202ENST00000361168 NDUFA6P56556 154 aa11.81□□□□□ -0.52
CLK2-202ENST00000361168 FOXI1Q12951 378 aa11.81□□□□□ -0.52
CLK2-202ENST00000361168 COX6A2Q02221 97 aa11.8□□□□□ -0.52
CLK2-202ENST00000361168 RMI2Q96E14 147 aa11.8□□□□□ -0.52
CLK2-202ENST00000361168 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.8□□□□□ -0.52
CLK2-202ENST00000361168 SS18Q15532 418 aa11.8□□□□□ -0.52
CLK2-202ENST00000361168 Q6ZN92 141 aa11.8□□□□□ -0.52
CLK2-202ENST00000361168 FABP4P15090 132 aa11.79□□□□□ -0.52
CLK2-202ENST00000361168 UBE2D1P51668 147 aa11.79□□□□□ -0.52
CLK2-202ENST00000361168 LINC00242Q5T6M2 205 aa11.79□□□□□ -0.52
CLK2-202ENST00000361168 A0A1B0GVY2 172 aa11.78□□□□□ -0.52
CLK2-202ENST00000361168 LINC00336Q6ZUF6 198 aa11.78□□□□□ -0.52
CLK2-202ENST00000361168 COX11Q9Y6N1 276 aa11.78□□□□□ -0.52
CLK2-202ENST00000361168 CST9LQ9H4G1 147 aa11.78□□□□□ -0.52
CLK2-202ENST00000361168 KRTAP10-2P60368 255 aa11.77□□□□□ -0.53
CLK2-202ENST00000361168 C5orf38Q86SI9 138 aa11.77□□□□□ -0.53
CLK2-202ENST00000361168 A0A0J9YXV3 536 aa11.76□□□□□ -0.53
CLK2-202ENST00000361168 USP17L23D6RBM5 183 aa11.76□□□□□ -0.53
CLK2-202ENST00000361168 NPSP0C0P6 89 aa11.76□□□□□ -0.53
CLK2-202ENST00000361168 COA6Q5JTJ3 125 aaKnown RBP11.76□□□□□ -0.53
CLK2-202ENST00000361168 CD164L2Q6UWJ8 174 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms