RNA–Protein interactions for RNA: ENST00000360093.7

SCN3A-202, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN3A, Length 9,123 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-202ENST00000360093 LELP1Q5T871 98 aa3.6□□□□□ -1.83
SCN3A-202ENST00000360093 RNF185Q96GF1 192 aa3.6□□□□□ -1.83
SCN3A-202ENST00000360093 NREPQ16612 68 aa3.6□□□□□ -1.83
SCN3A-202ENST00000360093 PCSK5Q92824 1860 aa3.6□□□□□ -1.83
SCN3A-202ENST00000360093 SMIM20Q8N5G0 67 aa3.6□□□□□ -1.83
SCN3A-202ENST00000360093 MYO18BQ8IUG5 2567 aa3.59□□□□□ -1.83
SCN3A-202ENST00000360093 P0DMU3 169 aa3.59□□□□□ -1.83
SCN3A-202ENST00000360093 FAM231AP0DMU4 169 aa3.59□□□□□ -1.83
SCN3A-202ENST00000360093 FAM231CP0DMU5 169 aa3.59□□□□□ -1.83
SCN3A-202ENST00000360093 RNASE3P12724 160 aaKnown RBP3.59□□□□□ -1.83
SCN3A-202ENST00000360093 FAM110AQ9BQ89 295 aa3.59□□□□□ -1.83
SCN3A-202ENST00000360093 COX17Q14061 63 aa3.59□□□□□ -1.83
SCN3A-202ENST00000360093 NCR3O14931 201 aa3.59□□□□□ -1.83
SCN3A-202ENST00000360093 IGHV4-28A0A0C4DH34 117 aa3.59□□□□□ -1.84
SCN3A-202ENST00000360093 C10orf99Q6UWK7 81 aa3.59□□□□□ -1.84
SCN3A-202ENST00000360093 LECT2O14960 151 aa3.59□□□□□ -1.84
SCN3A-202ENST00000360093 CD164L2Q6UWJ8 174 aa3.59□□□□□ -1.84
SCN3A-202ENST00000360093 NRACQ8N912 160 aa3.59□□□□□ -1.84
SCN3A-202ENST00000360093 FRMD6-AS1P0C7T7 363 aa3.59□□□□□ -1.84
SCN3A-202ENST00000360093 DAND5Q8N907 189 aa3.58□□□□□ -1.84
SCN3A-202ENST00000360093 YPEL4Q96NS1 127 aa3.58□□□□□ -1.84
SCN3A-202ENST00000360093 MYO9AB2RTY4 2548 aa3.58□□□□□ -1.84
SCN3A-202ENST00000360093 NDUFS5O43920 106 aa3.58□□□□□ -1.84
SCN3A-202ENST00000360093 COX8CQ7Z4L0 72 aa3.58□□□□□ -1.84
SCN3A-202ENST00000360093 IGLV1-51P01701 117 aa3.58□□□□□ -1.84
SCN3A-202ENST00000360093 CHCHD7Q9BUK0 85 aa3.58□□□□□ -1.84
SCN3A-202ENST00000360093 ANKRD11Q6UB99 2663 aaPredicted RBP3.58□□□□□ -1.84
SCN3A-202ENST00000360093 CEMP1Q6PRD7 247 aaPredicted RBP3.58□□□□□ -1.84
SCN3A-202ENST00000360093 ATOX1O00244 68 aa3.58□□□□□ -1.84
SCN3A-202ENST00000360093 MRPS12O15235 138 aaKnown RBP3.58□□□□□ -1.84
SCN3A-202ENST00000360093 ZNF22P17026 224 aaPredicted RBP3.58□□□□□ -1.84
SCN3A-202ENST00000360093 GOLGB1Q14789 3259 aaKnown RBP3.58□□□□□ -1.84
SCN3A-202ENST00000360093 AVPP01185 164 aa3.58□□□□□ -1.84
SCN3A-202ENST00000360093 POLR2KP53803 58 aaKnown RBP3.58□□□□□ -1.84
SCN3A-202ENST00000360093 KPRPQ5T749 579 aaPredicted RBP3.58□□□□□ -1.84
SCN3A-202ENST00000360093 CDPF1Q6NVV7 123 aa3.58□□□□□ -1.84
SCN3A-202ENST00000360093 Q6ZS46 218 aa3.58□□□□□ -1.84
SCN3A-202ENST00000360093 LINC00482Q8N8I6 264 aa3.58□□□□□ -1.84
SCN3A-202ENST00000360093 CDKN2A-AS1Q9UH64 79 aa3.58□□□□□ -1.84
SCN3A-202ENST00000360093 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP3.57□□□□□ -1.84
SCN3A-202ENST00000360093 AGRNO00468 2067 aa3.57□□□□□ -1.84
SCN3A-202ENST00000360093 MP68P56378 58 aa3.57□□□□□ -1.84
SCN3A-202ENST00000360093 TAX1BP3O14907 124 aa3.57□□□□□ -1.84
SCN3A-202ENST00000360093 TSHBP01222 138 aa3.57□□□□□ -1.84
SCN3A-202ENST00000360093 PTH2Q96A98 100 aa3.57□□□□□ -1.84
SCN3A-202ENST00000360093 LINC00474Q9P2X8 69 aa3.57□□□□□ -1.84
SCN3A-202ENST00000360093 SYCNQ0VAF6 134 aa3.57□□□□□ -1.84
SCN3A-202ENST00000360093 TP73-AS1Q9UF72 201 aa3.57□□□□□ -1.84
SCN3A-202ENST00000360093 UBE2D4Q9Y2X8 147 aa3.57□□□□□ -1.84
SCN3A-202ENST00000360093 RBX1P62877 108 aa3.56□□□□□ -1.84
SCN3A-202ENST00000360093 LINC00308Q8TCZ7 52 aa3.56□□□□□ -1.84
SCN3A-202ENST00000360093 BBC3Q96PG8 261 aaPredicted RBP3.56□□□□□ -1.84
SCN3A-202ENST00000360093 FOXI1Q12951 378 aa3.56□□□□□ -1.84
SCN3A-202ENST00000360093 C18orf65Q6ZTR6 163 aa3.56□□□□□ -1.84
SCN3A-202ENST00000360093 LRRK2Q5S007 2527 aa3.56□□□□□ -1.84
SCN3A-202ENST00000360093 IGLV4-69A0A075B6H9 119 aa3.56□□□□□ -1.84
SCN3A-202ENST00000360093 A0A1B0GX51 115 aa3.56□□□□□ -1.84
SCN3A-202ENST00000360093 NUPR2A6NF83 97 aa3.56□□□□□ -1.84
SCN3A-202ENST00000360093 IGHV4-30-4P0DP06 118 aa3.56□□□□□ -1.84
SCN3A-202ENST00000360093 F8WDY8 70 aa3.56□□□□□ -1.84
SCN3A-202ENST00000360093 C7orf33Q8WU49 177 aa3.56□□□□□ -1.84
SCN3A-202ENST00000360093 COL27A1Q8IZC6 1860 aaPredicted RBP3.56□□□□□ -1.84
SCN3A-202ENST00000360093 TRBV30A0A0K0K1B3 111 aa3.56□□□□□ -1.84
SCN3A-202ENST00000360093 UBE2D3P61077 147 aa3.56□□□□□ -1.84
SCN3A-202ENST00000360093 UBE2D2P62837 147 aa3.56□□□□□ -1.84
SCN3A-202ENST00000360093 TMEM258P61165 79 aa3.55□□□□□ -1.84
SCN3A-202ENST00000360093 TTTY13Q9BZ97 58 aa3.55□□□□□ -1.84
SCN3A-202ENST00000360093 CLEC2BQ92478 149 aa3.55□□□□□ -1.84
SCN3A-202ENST00000360093 ZFYVE26Q68DK2 2539 aa3.55□□□□□ -1.84
SCN3A-202ENST00000360093 UBE2D1P51668 147 aa3.55□□□□□ -1.84
SCN3A-202ENST00000360093 KRTAP10-9P60411 292 aa3.55□□□□□ -1.84
SCN3A-202ENST00000360093 PRR9Q5T870 116 aa3.55□□□□□ -1.84
SCN3A-202ENST00000360093 ZNF706Q9Y5V0 76 aaPredicted RBP3.55□□□□□ -1.84
SCN3A-202ENST00000360093 ABCA2Q9BZC7 2435 aa3.55□□□□□ -1.84
SCN3A-202ENST00000360093 ODF3L2Q3SX64 289 aa3.55□□□□□ -1.84
SCN3A-202ENST00000360093 CSDC2Q9Y534 153 aaKnown RBP3.55□□□□□ -1.84
SCN3A-202ENST00000360093 A0A1W2PPR1 153 aa3.55□□□□□ -1.84
SCN3A-202ENST00000360093 Q8IZM0 81 aa3.55□□□□□ -1.84
SCN3A-202ENST00000360093 Q8N2B8 174 aa3.55□□□□□ -1.84
SCN3A-202ENST00000360093 LINC00959A0A1B0GUT2 108 aa3.55□□□□□ -1.84
SCN3A-202ENST00000360093 LINC00643Q86TS7 51 aa3.55□□□□□ -1.84
SCN3A-202ENST00000360093 Q8N976 141 aa3.54□□□□□ -1.84
SCN3A-202ENST00000360093 DHRS4-AS1Q9P1J3 65 aa3.54□□□□□ -1.84
SCN3A-202ENST00000360093 LOC107984640A0A0U1RRK4 108 aa3.54□□□□□ -1.84
SCN3A-202ENST00000360093 WFDC2Q14508 124 aa3.54□□□□□ -1.84
SCN3A-202ENST00000360093 CDC42SE2Q9NRR3 84 aa3.54□□□□□ -1.84
SCN3A-202ENST00000360093 C11orf21Q9P2W6 132 aa3.54□□□□□ -1.84
SCN3A-202ENST00000360093 IGKV2-24A0A0C4DH68 120 aa3.54□□□□□ -1.84
SCN3A-202ENST00000360093 TCL1BO95988 128 aa3.54□□□□□ -1.84
SCN3A-202ENST00000360093 ATP5EP2Q5VTU8 51 aa3.54□□□□□ -1.84
SCN3A-202ENST00000360093 M0R378 163 aa3.54□□□□□ -1.84
SCN3A-202ENST00000360093 PROK1P58294 105 aa3.54□□□□□ -1.84
SCN3A-202ENST00000360093 TRAV23DV6A0A075B6W5 121 aa3.54□□□□□ -1.84
SCN3A-202ENST00000360093 CENPFP49454 3210 aa3.53□□□□□ -1.84
SCN3A-202ENST00000360093 A0A087WZ39 114 aa3.53□□□□□ -1.84
SCN3A-202ENST00000360093 NHLRC4P0CG21 123 aaPredicted RBP3.53□□□□□ -1.84
SCN3A-202ENST00000360093 A0A0J9YWU9 116 aa3.53□□□□□ -1.84
SCN3A-202ENST00000360093 WFDC10AQ9H1F0 79 aa3.53□□□□□ -1.84
SCN3A-202ENST00000360093 G3V4G9 280 aa3.53□□□□□ -1.84
SCN3A-202ENST00000360093 BEAN1Q3B7T3 259 aa3.53□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms