RNA–Protein interactions for RNA: ENST00000358025.7

SYNE2-204, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SYNE2, Length 21,842 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-204ENST00000358025 MUC6Q6W4X9 2439 aa3.07□□□□□ -1.92
SYNE2-204ENST00000358025 CLPSL1A2RUU4 121 aa3.07□□□□□ -1.92
SYNE2-204ENST00000358025 CRYGDP07320 174 aa3.07□□□□□ -1.92
SYNE2-204ENST00000358025 RPL35AP18077 110 aaKnown RBP3.07□□□□□ -1.92
SYNE2-204ENST00000358025 TRIOO75962 3097 aa3.07□□□□□ -1.92
SYNE2-204ENST00000358025 FAM236DA0A1B0GTK5 79 aa3.07□□□□□ -1.92
SYNE2-204ENST00000358025 FAM236CP0DP71 79 aa3.07□□□□□ -1.92
SYNE2-204ENST00000358025 SMCPP49901 116 aaPredicted RBP3.07□□□□□ -1.92
SYNE2-204ENST00000358025 FAM19A5Q7Z5A7 132 aaPredicted RBP3.07□□□□□ -1.92
SYNE2-204ENST00000358025 A0A096LPF7 62 aa3.07□□□□□ -1.92
SYNE2-204ENST00000358025 DEFB131AP59861 70 aa3.07□□□□□ -1.92
SYNE2-204ENST00000358025 HAMPP81172 84 aa3.07□□□□□ -1.92
SYNE2-204ENST00000358025 RPL39LQ96EH5 51 aaKnown RBP3.07□□□□□ -1.92
SYNE2-204ENST00000358025 PCNTO95613 3336 aa3.07□□□□□ -1.92
SYNE2-204ENST00000358025 IGLV5-39A0A0G2JS06 123 aa3.07□□□□□ -1.92
SYNE2-204ENST00000358025 UBE2BP63146 152 aa3.07□□□□□ -1.92
SYNE2-204ENST00000358025 SHISA2Q6UWI4 295 aa3.07□□□□□ -1.92
SYNE2-204ENST00000358025 K7EQG2 157 aa3.06□□□□□ -1.92
SYNE2-204ENST00000358025 DCANP1Q8TF63 244 aa3.06□□□□□ -1.92
SYNE2-204ENST00000358025 ZNRD1Q9P1U0 126 aa3.06□□□□□ -1.92
SYNE2-204ENST00000358025 RPL39P62891 51 aaKnown RBP3.06□□□□□ -1.92
SYNE2-204ENST00000358025 COX7B2Q8TF08 81 aa3.06□□□□□ -1.92
SYNE2-204ENST00000358025 HIGD2BQ4VC39 106 aa3.06□□□□□ -1.92
SYNE2-204ENST00000358025 ABCA12Q86UK0 2595 aa3.06□□□□□ -1.92
SYNE2-204ENST00000358025 IGFL4Q6B9Z1 124 aa3.06□□□□□ -1.92
SYNE2-204ENST00000358025 ZNF625Q96I27 306 aaPredicted RBP3.06□□□□□ -1.92
SYNE2-204ENST00000358025 DSPP15924 2871 aaKnown RBP3.06□□□□□ -1.92
SYNE2-204ENST00000358025 A0A1B0GUV1 79 aa3.06□□□□□ -1.92
SYNE2-204ENST00000358025 SPRNQ5BIV9 151 aa3.06□□□□□ -1.92
SYNE2-204ENST00000358025 OVOL3O00110 214 aa3.05□□□□□ -1.92
SYNE2-204ENST00000358025 TRBV6-4A0A1B0GX49 114 aa3.05□□□□□ -1.92
SYNE2-204ENST00000358025 NDPQ00604 133 aa3.05□□□□□ -1.92
SYNE2-204ENST00000358025 TSHBP01222 138 aa3.05□□□□□ -1.92
SYNE2-204ENST00000358025 MSMPQ1L6U9 139 aa3.05□□□□□ -1.92
SYNE2-204ENST00000358025 NREPQ16612 68 aa3.05□□□□□ -1.92
SYNE2-204ENST00000358025 CCDC179H3BU77 68 aa3.05□□□□□ -1.92
SYNE2-204ENST00000358025 USP17L23D6RBM5 183 aa3.05□□□□□ -1.92
SYNE2-204ENST00000358025 DIRC1Q969H9 104 aa3.05□□□□□ -1.92
SYNE2-204ENST00000358025 CLEC2BQ92478 149 aa3.05□□□□□ -1.92
SYNE2-204ENST00000358025 SPINK13Q1W4C9 94 aa3.05□□□□□ -1.92
SYNE2-204ENST00000358025 C4orf3Q8WVX3 66 aa3.05□□□□□ -1.92
SYNE2-204ENST00000358025 UPK3BQ9BT76 320 aa3.05□□□□□ -1.92
SYNE2-204ENST00000358025 KIF25-AS1Q9Y6Z4 181 aa3.05□□□□□ -1.92
SYNE2-204ENST00000358025 LY6HO94772 140 aa3.05□□□□□ -1.92
SYNE2-204ENST00000358025 TTTY13Q9BZ97 58 aa3.05□□□□□ -1.92
SYNE2-204ENST00000358025 TRGV1A0A0A0MS02 117 aa3.05□□□□□ -1.92
SYNE2-204ENST00000358025 C1orf229Q6ZS94 237 aaPredicted RBP3.05□□□□□ -1.92
SYNE2-204ENST00000358025 FAM19A4Q96LR4 140 aa3.05□□□□□ -1.92
SYNE2-204ENST00000358025 ANKRD11Q6UB99 2663 aaPredicted RBP3.05□□□□□ -1.92
SYNE2-204ENST00000358025 DEFB114Q30KQ6 69 aa3.05□□□□□ -1.92
SYNE2-204ENST00000358025 MIR7-3HGQ8N6C7 128 aa3.04□□□□□ -1.92
SYNE2-204ENST00000358025 RMI2Q96E14 147 aa3.04□□□□□ -1.92
SYNE2-204ENST00000358025 GNLYP22749 145 aa3.04□□□□□ -1.92
SYNE2-204ENST00000358025 NAV2Q8IVL1 2488 aa3.04□□□□□ -1.92
SYNE2-204ENST00000358025 PFN2P35080 140 aa3.04□□□□□ -1.92
SYNE2-204ENST00000358025 APOC4P55056 127 aa3.04□□□□□ -1.92
SYNE2-204ENST00000358025 GOLGB1Q14789 3259 aaKnown RBP3.04□□□□□ -1.92
SYNE2-204ENST00000358025 DIAPH2-AS1Q14236 149 aa3.04□□□□□ -1.92
SYNE2-204ENST00000358025 POLQO75417 2590 aa3.04□□□□□ -1.92
SYNE2-204ENST00000358025 NBL1P41271 181 aa3.04□□□□□ -1.92
SYNE2-204ENST00000358025 SMIM11BQ8TCY0 68 aa3.04□□□□□ -1.92
SYNE2-204ENST00000358025 F5H768 121 aa3.04□□□□□ -1.92
SYNE2-204ENST00000358025 UBE2D4Q9Y2X8 147 aa3.04□□□□□ -1.92
SYNE2-204ENST00000358025 H3BPC8 53 aa3.03□□□□□ -1.92
SYNE2-204ENST00000358025 BRD3OSQ6XYD6 125 aa3.03□□□□□ -1.92
SYNE2-204ENST00000358025 CHD9Q3L8U1 2897 aa3.03□□□□□ -1.92
SYNE2-204ENST00000358025 F8WEM9 126 aa3.03□□□□□ -1.92
SYNE2-204ENST00000358025 VPS13AQ96RL7 3174 aa3.03□□□□□ -1.92
SYNE2-204ENST00000358025 A6NDX4 124 aa3.03□□□□□ -1.92
SYNE2-204ENST00000358025 F8W735 103 aaPredicted RBP3.03□□□□□ -1.92
SYNE2-204ENST00000358025 LINC00694P0DN24 101 aa3.03□□□□□ -1.92
SYNE2-204ENST00000358025 LMO4P61968 165 aa3.03□□□□□ -1.92
SYNE2-204ENST00000358025 ASPHD1Q5U4P2 390 aa3.03□□□□□ -1.92
SYNE2-204ENST00000358025 ZFHX2Q9C0A1 2572 aaPredicted RBP3.03□□□□□ -1.92
SYNE2-204ENST00000358025 FRYLO94915 3013 aa3.03□□□□□ -1.92
SYNE2-204ENST00000358025 PRAC2D3DTV9 90 aa3.03□□□□□ -1.92
SYNE2-204ENST00000358025 C11orf21Q9P2W6 132 aa3.03□□□□□ -1.92
SYNE2-204ENST00000358025 LOC110117498A0A087WWA1 95 aa3.03□□□□□ -1.92
SYNE2-204ENST00000358025 TRBV12-3P01733 135 aa3.03□□□□□ -1.92
SYNE2-204ENST00000358025 PRO0255Q9UI72 69 aa3.03□□□□□ -1.92
SYNE2-204ENST00000358025 G3V318 75 aa3.03□□□□□ -1.92
SYNE2-204ENST00000358025 MIFP14174 115 aa3.03□□□□□ -1.92
SYNE2-204ENST00000358025 CD164L2Q6UWJ8 174 aa3.03□□□□□ -1.92
SYNE2-204ENST00000358025 BPY2O14599 106 aa3.03□□□□□ -1.92
SYNE2-204ENST00000358025 CDKN2A-AS1Q9UH64 79 aa3.03□□□□□ -1.92
SYNE2-204ENST00000358025 NHLRC4P0CG21 123 aaPredicted RBP3.03□□□□□ -1.92
SYNE2-204ENST00000358025 Q8N814 137 aa3.03□□□□□ -1.92
SYNE2-204ENST00000358025 LAMA1P25391 3075 aa3.03□□□□□ -1.92
SYNE2-204ENST00000358025 XCL1P47992 114 aa3.02□□□□□ -1.93
SYNE2-204ENST00000358025 FAM19A3Q7Z5A8 133 aa3.02□□□□□ -1.93
SYNE2-204ENST00000358025 XCL2Q9UBD3 114 aa3.02□□□□□ -1.93
SYNE2-204ENST00000358025 SETD2Q9BYW2 2564 aaPredicted RBP3.02□□□□□ -1.93
SYNE2-204ENST00000358025 PSCAO43653 123 aa3.02□□□□□ -1.93
SYNE2-204ENST00000358025 Q8IZM0 81 aa3.02□□□□□ -1.93
SYNE2-204ENST00000358025 IGKV3D-7A0A0C4DH55 119 aa3.02□□□□□ -1.93
SYNE2-204ENST00000358025 IGLV1-40P01703 118 aa3.02□□□□□ -1.93
SYNE2-204ENST00000358025 TRBV6-8A0A0A6YYG3 113 aa3.02□□□□□ -1.93
SYNE2-204ENST00000358025 LINC00315P59091 139 aa3.02□□□□□ -1.93
SYNE2-204ENST00000358025 CDK2AP2O75956 126 aa3.02□□□□□ -1.93
SYNE2-204ENST00000358025 hDV103S1A0JD37 113 aa3.02□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms