RNA–Protein interactions for RNA: ENST00000357732.8

RTN4-204, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 2,390 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-204ENST00000357732 TRAV4A0A0B4J268 109 aa12.77□□□□□ -0.37
RTN4-204ENST00000357732 TRBV10-1A0A0K0K1A3 114 aa12.77□□□□□ -0.37
RTN4-204ENST00000357732 A8MZ25 164 aa12.77□□□□□ -0.37
RTN4-204ENST00000357732 NDUFV3P56181 108 aaKnown RBP12.77□□□□□ -0.37
RTN4-204ENST00000357732 DYNLRB2Q8TF09 96 aa12.77□□□□□ -0.37
RTN4-204ENST00000357732 PRM2P04554 102 aa12.76□□□□□ -0.37
RTN4-204ENST00000357732 TTC32Q5I0X7 151 aa12.76□□□□□ -0.37
RTN4-204ENST00000357732 IGHV3OR16-12A0A075B7B8 117 aa12.75□□□□□ -0.37
RTN4-204ENST00000357732 IL17DQ8TAD2 202 aa12.75□□□□□ -0.37
RTN4-204ENST00000357732 LINC00308Q8TCZ7 52 aa12.75□□□□□ -0.37
RTN4-204ENST00000357732 USP9YO00507 2555 aaPredicted RBP12.75□□□□□ -0.37
RTN4-204ENST00000357732 SORL1Q92673 2214 aa12.75□□□□□ -0.37
RTN4-204ENST00000357732 IGHV3-38A0A0C4DH36 116 aa12.74□□□□□ -0.37
RTN4-204ENST00000357732 DEFB114Q30KQ6 69 aa12.74□□□□□ -0.37
RTN4-204ENST00000357732 LINC00242Q5T6M2 205 aa12.74□□□□□ -0.37
RTN4-204ENST00000357732 C15orf53Q8NAA6 179 aa12.74□□□□□ -0.37
RTN4-204ENST00000357732 CLEC2BQ92478 149 aa12.74□□□□□ -0.37
RTN4-204ENST00000357732 TRAV25A0A0B4J276 109 aa12.74□□□□□ -0.37
RTN4-204ENST00000357732 DAZ2Q13117 558 aaKnown RBP12.74□□□□□ -0.37
RTN4-204ENST00000357732 DAZ4Q86SG3 579 aaKnown RBP12.74□□□□□ -0.37
RTN4-204ENST00000357732 CITED2Q99967 270 aaPredicted RBP12.74□□□□□ -0.37
RTN4-204ENST00000357732 DAZ3Q9NR90 486 aaKnown RBP12.74□□□□□ -0.37
RTN4-204ENST00000357732 POLQO75417 2590 aa12.74□□□□□ -0.37
RTN4-204ENST00000357732 CRLF1O75462 422 aa12.73□□□□□ -0.37
RTN4-204ENST00000357732 ACYP1P07311 99 aa12.73□□□□□ -0.37
RTN4-204ENST00000357732 NHLRC4P0CG21 123 aaPredicted RBP12.73□□□□□ -0.37
RTN4-204ENST00000357732 IGHV4-31P0DP07 118 aa12.73□□□□□ -0.37
RTN4-204ENST00000357732 NPC2P61916 151 aa12.73□□□□□ -0.37
RTN4-204ENST00000357732 HERV-K104P63124 156 aa12.73□□□□□ -0.37
RTN4-204ENST00000357732 Q9H8V8 135 aa12.73□□□□□ -0.37
RTN4-204ENST00000357732 MXRA5Q9NR99 2828 aa12.73□□□□□ -0.37
RTN4-204ENST00000357732 CACNA1AO00555 2505 aa12.73□□□□□ -0.37
RTN4-204ENST00000357732 COX7A2LO14548 114 aa12.73□□□□□ -0.37
RTN4-204ENST00000357732 MYO18BQ8IUG5 2567 aa12.72□□□□□ -0.37
RTN4-204ENST00000357732 RPL36AP83881 106 aaKnown RBP12.72□□□□□ -0.37
RTN4-204ENST00000357732 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.72□□□□□ -0.37
RTN4-204ENST00000357732 RPL36ALQ969Q0 106 aaKnown RBP12.72□□□□□ -0.37
RTN4-204ENST00000357732 Q6ZSV7 163 aa12.72□□□□□ -0.37
RTN4-204ENST00000357732 ANKRD17O75179 2603 aaKnown RBP12.71□□□□□ -0.37
RTN4-204ENST00000357732 SMIM1B2RUZ4 78 aa12.71□□□□□ -0.37
RTN4-204ENST00000357732 PRB1P04280 392 aa12.71□□□□□ -0.37
RTN4-204ENST00000357732 SHISA2Q6UWI4 295 aa12.71□□□□□ -0.37
RTN4-204ENST00000357732 COX6A2Q02221 97 aa12.71□□□□□ -0.38
RTN4-204ENST00000357732 HIST2H2BDQ6DRA6 164 aa12.7□□□□□ -0.38
RTN4-204ENST00000357732 ZNF625Q96I27 306 aaPredicted RBP12.7□□□□□ -0.38
RTN4-204ENST00000357732 K7EQD1 137 aa12.69□□□□□ -0.38
RTN4-204ENST00000357732 DAND5Q8N907 189 aa12.69□□□□□ -0.38
RTN4-204ENST00000357732 TRACP01848 142 aa12.69□□□□□ -0.38
RTN4-204ENST00000357732 TRBV7-7A0A0K0K1E9 115 aa12.68□□□□□ -0.38
RTN4-204ENST00000357732 GAGE12JA6NER3 117 aa12.68□□□□□ -0.38
RTN4-204ENST00000357732 GAGE7O76087 117 aa12.68□□□□□ -0.38
RTN4-204ENST00000357732 GAGE12FP0CL80 117 aa12.68□□□□□ -0.38
RTN4-204ENST00000357732 GAGE12GP0CL81 117 aa12.68□□□□□ -0.38
RTN4-204ENST00000357732 GAGE12IP0CL82 117 aa12.68□□□□□ -0.38
RTN4-204ENST00000357732 KRTAP10-9P60411 292 aa12.68□□□□□ -0.38
RTN4-204ENST00000357732 GAGE4Q13068 117 aa12.68□□□□□ -0.38
RTN4-204ENST00000357732 PF4P02776 101 aa12.67□□□□□ -0.38
RTN4-204ENST00000357732 STHQ8IWL8 128 aa12.67□□□□□ -0.38
RTN4-204ENST00000357732 CDC42SE2Q9NRR3 84 aa12.67□□□□□ -0.38
RTN4-204ENST00000357732 CREBBPQ92793 2442 aa12.66□□□□□ -0.38
RTN4-204ENST00000357732 PRIMA1Q86XR5 153 aa12.66□□□□□ -0.38
RTN4-204ENST00000357732 IMUPQ9GZP8 106 aa12.66□□□□□ -0.38
RTN4-204ENST00000357732 CENPEQ02224 2701 aa12.66□□□□□ -0.38
RTN4-204ENST00000357732 TRGV1A0A0A0MS02 117 aa12.66□□□□□ -0.38
RTN4-204ENST00000357732 ODF3L2Q3SX64 289 aa12.66□□□□□ -0.38
RTN4-204ENST00000357732 KHDC1LQ5JSQ8 128 aa12.66□□□□□ -0.38
RTN4-204ENST00000357732 C1orf158Q8N1D5 194 aa12.66□□□□□ -0.38
RTN4-204ENST00000357732 TMEM86BQ8N661 226 aa12.66□□□□□ -0.38
RTN4-204ENST00000357732 F5H768 121 aa12.65□□□□□ -0.38
RTN4-204ENST00000357732 LINC00694P0DN24 101 aa12.65□□□□□ -0.38
RTN4-204ENST00000357732 XCL2Q9UBD3 114 aa12.65□□□□□ -0.38
RTN4-204ENST00000357732 MEIG1Q5JSS6 88 aa12.65□□□□□ -0.38
RTN4-204ENST00000357732 FAM222AQ5U5X8 452 aa12.65□□□□□ -0.38
RTN4-204ENST00000357732 ACACBO00763 2458 aa12.65□□□□□ -0.38
RTN4-204ENST00000357732 NTM-AS1Q6ZSK4 140 aa12.64□□□□□ -0.39
RTN4-204ENST00000357732 SVIPQ8NHG7 77 aa12.64□□□□□ -0.39
RTN4-204ENST00000357732 SOSTDC1Q6X4U4 206 aa12.63□□□□□ -0.39
RTN4-204ENST00000357732 CR1P17927 2039 aa12.63□□□□□ -0.39
RTN4-204ENST00000357732 CMC4P56277 68 aaPredicted RBP12.63□□□□□ -0.39
RTN4-204ENST00000357732 FAM208BQ5VWN6 2430 aa12.62□□□□□ -0.39
RTN4-204ENST00000357732 TRAV13-1A0A0B4J241 112 aa12.62□□□□□ -0.39
RTN4-204ENST00000357732 TRAV13-2A0A0B4J235 113 aa12.62□□□□□ -0.39
RTN4-204ENST00000357732 LRRC75A-AS1Q8N1F1 130 aa12.62□□□□□ -0.39
RTN4-204ENST00000357732 OVOL2Q9BRP0 275 aa12.61□□□□□ -0.39
RTN4-204ENST00000357732 TMEM243Q9BU79 118 aa12.61□□□□□ -0.39
RTN4-204ENST00000357732 B5MCH6 92 aa12.61□□□□□ -0.39
RTN4-204ENST00000357732 UBE2L6O14933 153 aa12.61□□□□□ -0.39
RTN4-204ENST00000357732 HIST2H2BCQ6DN03 193 aa12.61□□□□□ -0.39
RTN4-204ENST00000357732 BBC3Q96PG8 261 aaPredicted RBP12.61□□□□□ -0.39
RTN4-204ENST00000357732 ZNF462Q96JM2 2506 aa12.6□□□□□ -0.39
RTN4-204ENST00000357732 TEX15Q9BXT5 2789 aa12.6□□□□□ -0.39
RTN4-204ENST00000357732 DEFB113Q30KQ7 82 aa12.59□□□□□ -0.39
RTN4-204ENST00000357732 Q6ZTI0 123 aa12.59□□□□□ -0.39
RTN4-204ENST00000357732 Q96MF0 132 aa12.59□□□□□ -0.39
RTN4-204ENST00000357732 ZFYVE26Q68DK2 2539 aa12.59□□□□□ -0.39
RTN4-204ENST00000357732 AKAP9Q99996 3911 aa12.58□□□□□ -0.39
RTN4-204ENST00000357732 RPL28P46779 137 aaKnown RBP12.58□□□□□ -0.4
RTN4-204ENST00000357732 LRRK2Q5S007 2527 aa12.58□□□□□ -0.4
RTN4-204ENST00000357732 INAFM2P0DMQ5 153 aa12.58□□□□□ -0.4
RTN4-204ENST00000357732 SDIM1Q6ZPB5 146 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 135.8 ms