RNA–Protein interactions for RNA: ENST00000357276.8

SMARCAL1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene SMARCAL1, Length 3,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-201ENST00000357276 HERVK_113P63121 156 aa8.73□□□□□ -1.01
SMARCAL1-201ENST00000357276 FAM218AQ96MZ4 157 aa8.73□□□□□ -1.01
SMARCAL1-201ENST00000357276 IGHV4-38-2P0DP08 117 aa8.73□□□□□ -1.01
SMARCAL1-201ENST00000357276 CRYGAP11844 174 aa8.73□□□□□ -1.01
SMARCAL1-201ENST00000357276 COPS9Q8WXC6 57 aa8.73□□□□□ -1.01
SMARCAL1-201ENST00000357276 ZNF625Q96I27 306 aaPredicted RBP8.73□□□□□ -1.01
SMARCAL1-201ENST00000357276 Q9H8V8 135 aa8.73□□□□□ -1.01
SMARCAL1-201ENST00000357276 IGHV3OR16-12A0A075B7B8 117 aa8.72□□□□□ -1.01
SMARCAL1-201ENST00000357276 BAALC-AS2P0C853 105 aa8.72□□□□□ -1.01
SMARCAL1-201ENST00000357276 LINC00242Q5T6M2 205 aa8.72□□□□□ -1.01
SMARCAL1-201ENST00000357276 LRRC75A-AS1Q8N1F1 130 aa8.72□□□□□ -1.01
SMARCAL1-201ENST00000357276 IGHV3-53P01767 116 aa8.72□□□□□ -1.01
SMARCAL1-201ENST00000357276 BBC3Q96PG8 261 aaPredicted RBP8.72□□□□□ -1.01
SMARCAL1-201ENST00000357276 CSDC2Q9Y534 153 aaKnown RBP8.72□□□□□ -1.01
SMARCAL1-201ENST00000357276 VPS13CQ709C8 3753 aa8.72□□□□□ -1.01
SMARCAL1-201ENST00000357276 SMIM1B2RUZ4 78 aa8.71□□□□□ -1.02
SMARCAL1-201ENST00000357276 INAFM2P0DMQ5 153 aa8.71□□□□□ -1.02
SMARCAL1-201ENST00000357276 RPS28P62857 69 aaKnown RBP8.7□□□□□ -1.02
SMARCAL1-201ENST00000357276 ZNF415Q09FC8 603 aa8.7□□□□□ -1.02
SMARCAL1-201ENST00000357276 KNCNA6PVL3 124 aa8.69□□□□□ -1.02
SMARCAL1-201ENST00000357276 TMEM89A2RUT3 159 aa8.69□□□□□ -1.02
SMARCAL1-201ENST00000357276 RPL28P46779 137 aaKnown RBP8.69□□□□□ -1.02
SMARCAL1-201ENST00000357276 C11orf72Q8NBR9 251 aa8.69□□□□□ -1.02
SMARCAL1-201ENST00000357276 USP24Q9UPU5 2620 aa8.69□□□□□ -1.02
SMARCAL1-201ENST00000357276 F5H768 121 aa8.69□□□□□ -1.02
SMARCAL1-201ENST00000357276 OBSCN-AS1Q96MR7 158 aa8.69□□□□□ -1.02
SMARCAL1-201ENST00000357276 HIST2H2BCQ6DN03 193 aa8.68□□□□□ -1.02
SMARCAL1-201ENST00000357276 HIST2H2BDQ6DRA6 164 aa8.68□□□□□ -1.02
SMARCAL1-201ENST00000357276 LOC107984640A0A0U1RRK4 108 aa8.68□□□□□ -1.02
SMARCAL1-201ENST00000357276 RBMY1BA6NDE4 496 aaKnown RBP8.68□□□□□ -1.02
SMARCAL1-201ENST00000357276 RBMY1EA6NEQ0 496 aaKnown RBP8.68□□□□□ -1.02
SMARCAL1-201ENST00000357276 J3KT08 172 aa8.68□□□□□ -1.02
SMARCAL1-201ENST00000357276 PF4P02776 101 aa8.68□□□□□ -1.02
SMARCAL1-201ENST00000357276 RBMY1DP0C7P1 496 aaKnown RBP8.68□□□□□ -1.02
SMARCAL1-201ENST00000357276 KLK5Q9Y337 293 aaPredicted RBP8.68□□□□□ -1.02
SMARCAL1-201ENST00000357276 ATOX1O00244 68 aa8.67□□□□□ -1.02
SMARCAL1-201ENST00000357276 MALP21145 153 aa8.67□□□□□ -1.02
SMARCAL1-201ENST00000357276 IGSF10Q6WRI0 2623 aa8.67□□□□□ -1.02
SMARCAL1-201ENST00000357276 IGHV3-38A0A0C4DH36 116 aa8.67□□□□□ -1.02
SMARCAL1-201ENST00000357276 PRM2P04554 102 aa8.67□□□□□ -1.02
SMARCAL1-201ENST00000357276 ACACBO00763 2458 aa8.67□□□□□ -1.02
SMARCAL1-201ENST00000357276 RS1O15537 224 aa8.67□□□□□ -1.02
SMARCAL1-201ENST00000357276 IGHV4-61A0A0C4DH41 118 aa8.66□□□□□ -1.02
SMARCAL1-201ENST00000357276 C10orf99Q6UWK7 81 aa8.66□□□□□ -1.02
SMARCAL1-201ENST00000357276 GAGE2AQ6NT46 116 aa8.65□□□□□ -1.02
SMARCAL1-201ENST00000357276 PIMREGQ9BSJ6 248 aa8.65□□□□□ -1.02
SMARCAL1-201ENST00000357276 A0A0U1RRA0 63 aa8.65□□□□□ -1.03
SMARCAL1-201ENST00000357276 PRB1P04280 392 aa8.65□□□□□ -1.03
SMARCAL1-201ENST00000357276 SYNJ2BPP57105 145 aa8.65□□□□□ -1.03
SMARCAL1-201ENST00000357276 PRIMA1Q86XR5 153 aa8.65□□□□□ -1.03
SMARCAL1-201ENST00000357276 CYSTM1Q9H1C7 97 aa8.65□□□□□ -1.03
SMARCAL1-201ENST00000357276 HTN1P15515 57 aa8.64□□□□□ -1.03
SMARCAL1-201ENST00000357276 UPK3BQ9BT76 320 aa8.64□□□□□ -1.03
SMARCAL1-201ENST00000357276 TRAV13-2A0A0B4J235 113 aa8.64□□□□□ -1.03
SMARCAL1-201ENST00000357276 RPL18AQ02543 176 aaKnown RBP8.64□□□□□ -1.03
SMARCAL1-201ENST00000357276 FAM19A5Q7Z5A7 132 aaPredicted RBP8.64□□□□□ -1.03
SMARCAL1-201ENST00000357276 IGKV2-28A0A075B6P5 120 aa8.63□□□□□ -1.03
SMARCAL1-201ENST00000357276 IGKV2D-28P01615 120 aa8.63□□□□□ -1.03
SMARCAL1-201ENST00000357276 C5orf47Q569G3 176 aa8.63□□□□□ -1.03
SMARCAL1-201ENST00000357276 Q6JHZ5 121 aa8.63□□□□□ -1.03
SMARCAL1-201ENST00000357276 C9orf129Q5T035 196 aaKnown RBP8.63□□□□□ -1.03
SMARCAL1-201ENST00000357276 DGAT2L7PQ6IED9 249 aa8.63□□□□□ -1.03
SMARCAL1-201ENST00000357276 LINC00337Q8N6G1 96 aa8.63□□□□□ -1.03
SMARCAL1-201ENST00000357276 CCL19Q99731 98 aa8.63□□□□□ -1.03
SMARCAL1-201ENST00000357276 OVOL2Q9BRP0 275 aa8.63□□□□□ -1.03
SMARCAL1-201ENST00000357276 Q9HAA7 133 aa8.63□□□□□ -1.03
SMARCAL1-201ENST00000357276 DSCR9P59020 149 aa8.63□□□□□ -1.03
SMARCAL1-201ENST00000357276 SMIM9A6NGZ8 99 aa8.62□□□□□ -1.03
SMARCAL1-201ENST00000357276 Q96MF0 132 aa8.62□□□□□ -1.03
SMARCAL1-201ENST00000357276 C10orf105Q8TEF2 133 aa8.62□□□□□ -1.03
SMARCAL1-201ENST00000357276 CDC42SE2Q9NRR3 84 aa8.62□□□□□ -1.03
SMARCAL1-201ENST00000357276 SPTAN1Q13813 2472 aaKnown RBP8.61□□□□□ -1.03
SMARCAL1-201ENST00000357276 hADV29S1A0JD25 119 aa8.61□□□□□ -1.03
SMARCAL1-201ENST00000357276 HOXD3P31249 432 aaPredicted RBP8.61□□□□□ -1.03
SMARCAL1-201ENST00000357276 DEFB131AP59861 70 aa8.61□□□□□ -1.03
SMARCAL1-201ENST00000357276 NTM-AS1Q6ZSK4 140 aa8.61□□□□□ -1.03
SMARCAL1-201ENST00000357276 IL17DQ8TAD2 202 aa8.61□□□□□ -1.03
SMARCAL1-201ENST00000357276 DOPEY1Q5JWR5 2465 aa8.61□□□□□ -1.03
SMARCAL1-201ENST00000357276 A0A087WYN8 130 aa8.6□□□□□ -1.03
SMARCAL1-201ENST00000357276 AVPP01185 164 aa8.6□□□□□ -1.03
SMARCAL1-201ENST00000357276 NBASA2RRP1 2371 aa8.6□□□□□ -1.03
SMARCAL1-201ENST00000357276 CFAP46Q8IYW2 2715 aa8.6□□□□□ -1.03
SMARCAL1-201ENST00000357276 SORL1Q92673 2214 aa8.6□□□□□ -1.03
SMARCAL1-201ENST00000357276 TMEM258P61165 79 aa8.6□□□□□ -1.03
SMARCAL1-201ENST00000357276 SERP2Q8N6R1 65 aa8.6□□□□□ -1.03
SMARCAL1-201ENST00000357276 LINC00846Q9NV44 126 aa8.6□□□□□ -1.03
SMARCAL1-201ENST00000357276 CRYBG3Q68DQ2 2970 aa8.59□□□□□ -1.03
SMARCAL1-201ENST00000357276 CRPP02741 224 aa8.59□□□□□ -1.03
SMARCAL1-201ENST00000357276 LINC01561Q8N1V8 128 aa8.59□□□□□ -1.03
SMARCAL1-201ENST00000357276 SMIM11BQ8TCY0 68 aa8.59□□□□□ -1.03
SMARCAL1-201ENST00000357276 TRAV13-1A0A0B4J241 112 aa8.58□□□□□ -1.04
SMARCAL1-201ENST00000357276 DNAL4O96015 105 aa8.58□□□□□ -1.04
SMARCAL1-201ENST00000357276 MSMBP08118 114 aa8.58□□□□□ -1.04
SMARCAL1-201ENST00000357276 DPH3Q96FX2 82 aa8.58□□□□□ -1.04
SMARCAL1-201ENST00000357276 H0YGX0 51 aa8.58□□□□□ -1.04
SMARCAL1-201ENST00000357276 UBE2E2Q96LR5 201 aa8.58□□□□□ -1.04
SMARCAL1-201ENST00000357276 C14orf132Q9NPU4 83 aa8.58□□□□□ -1.04
SMARCAL1-201ENST00000357276 IGHV4-59P01825 116 aa8.58□□□□□ -1.04
SMARCAL1-201ENST00000357276 COL12A1Q99715 3063 aa8.58□□□□□ -1.04
SMARCAL1-201ENST00000357276 TRBV10-1A0A0K0K1A3 114 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms