RNA–Protein interactions for RNA: ENST00000356887.11

GYPC-202, Transcript of glycophorin C (Gerbich blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GYPC, Length 2,067 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPC-202ENST00000356887 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.81□□□□□ -0.36
GYPC-202ENST00000356887 IGHV1-58A0A0C4DH39 117 aa12.81□□□□□ -0.36
GYPC-202ENST00000356887 GAGE2BQ13066 116 aa12.81□□□□□ -0.36
GYPC-202ENST00000356887 DEFB114Q30KQ6 69 aa12.81□□□□□ -0.36
GYPC-202ENST00000356887 GAGE2EQ4V326 116 aa12.81□□□□□ -0.36
GYPC-202ENST00000356887 RNASE13Q5GAN3 156 aaKnown RBP12.81□□□□□ -0.36
GYPC-202ENST00000356887 DNAJC30Q96LL9 226 aa12.81□□□□□ -0.36
GYPC-202ENST00000356887 Q96MF0 132 aa12.81□□□□□ -0.36
GYPC-202ENST00000356887 GAGE2DQ9UEU5 116 aa12.81□□□□□ -0.36
GYPC-202ENST00000356887 CREBBPQ92793 2442 aa12.81□□□□□ -0.36
GYPC-202ENST00000356887 ADARB2-AS1A8MUL3 147 aa12.81□□□□□ -0.36
GYPC-202ENST00000356887 IGHV3-53P01767 116 aa12.81□□□□□ -0.36
GYPC-202ENST00000356887 FHL3Q13643 280 aa12.81□□□□□ -0.36
GYPC-202ENST00000356887 SPANXCQ9NY87 97 aa12.81□□□□□ -0.36
GYPC-202ENST00000356887 DYNLRB2Q8TF09 96 aa12.8□□□□□ -0.36
GYPC-202ENST00000356887 UNC79Q9P2D8 2635 aa12.8□□□□□ -0.36
GYPC-202ENST00000356887 CCDC179H3BU77 68 aa12.79□□□□□ -0.36
GYPC-202ENST00000356887 RS1O15537 224 aa12.79□□□□□ -0.36
GYPC-202ENST00000356887 TTC32Q5I0X7 151 aa12.79□□□□□ -0.36
GYPC-202ENST00000356887 HECTD1Q9ULT8 2610 aa12.79□□□□□ -0.36
GYPC-202ENST00000356887 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.79□□□□□ -0.36
GYPC-202ENST00000356887 IGKV2-29A2NJV5 120 aaPredicted RBP12.79□□□□□ -0.36
GYPC-202ENST00000356887 VSIG2Q96IQ7 327 aa12.79□□□□□ -0.36
GYPC-202ENST00000356887 PPDPFQ9H3Y8 114 aa12.79□□□□□ -0.36
GYPC-202ENST00000356887 MXRA5Q9NR99 2828 aa12.78□□□□□ -0.36
GYPC-202ENST00000356887 INSP01308 110 aa12.78□□□□□ -0.36
GYPC-202ENST00000356887 ITPR2Q14571 2701 aa12.78□□□□□ -0.36
GYPC-202ENST00000356887 CCDC168Q8NDH2 2452 aa12.78□□□□□ -0.36
GYPC-202ENST00000356887 PDZD2O15018 2839 aa12.78□□□□□ -0.36
GYPC-202ENST00000356887 NDUFA12Q9UI09 145 aa12.77□□□□□ -0.36
GYPC-202ENST00000356887 H7C2G1 150 aa12.77□□□□□ -0.37
GYPC-202ENST00000356887 KHDC1LQ5JSQ8 128 aa12.77□□□□□ -0.37
GYPC-202ENST00000356887 SPANXDQ9BXN6 97 aa12.77□□□□□ -0.37
GYPC-202ENST00000356887 IGHV3-38A0A0C4DH36 116 aa12.76□□□□□ -0.37
GYPC-202ENST00000356887 ADAMTSL4-AS1Q5T5F5 129 aa12.76□□□□□ -0.37
GYPC-202ENST00000356887 ZNF469Q96JG9 3925 aaPredicted RBP12.76□□□□□ -0.37
GYPC-202ENST00000356887 HIST2H2BDQ6DRA6 164 aa12.76□□□□□ -0.37
GYPC-202ENST00000356887 ANKRD29Q8N6D5 301 aa12.76□□□□□ -0.37
GYPC-202ENST00000356887 WFDC11Q8NEX6 87 aa12.76□□□□□ -0.37
GYPC-202ENST00000356887 A8MZ25 164 aa12.74□□□□□ -0.37
GYPC-202ENST00000356887 SLC25A20O43772 301 aa12.74□□□□□ -0.37
GYPC-202ENST00000356887 SMIM9A6NGZ8 99 aa12.74□□□□□ -0.37
GYPC-202ENST00000356887 SNCGO76070 127 aa12.74□□□□□ -0.37
GYPC-202ENST00000356887 PRSS2P07478 247 aa12.74□□□□□ -0.37
GYPC-202ENST00000356887 ITPR3Q14573 2671 aa12.74□□□□□ -0.37
GYPC-202ENST00000356887 TRBV30A0A0K0K1B3 111 aa12.73□□□□□ -0.37
GYPC-202ENST00000356887 C9JAW5 83 aa12.73□□□□□ -0.37
GYPC-202ENST00000356887 MIAQ16674 131 aa12.73□□□□□ -0.37
GYPC-202ENST00000356887 Q1RN00 199 aa12.73□□□□□ -0.37
GYPC-202ENST00000356887 TIRAPP58753 221 aa12.73□□□□□ -0.37
GYPC-202ENST00000356887 ODF3L2Q3SX64 289 aa12.73□□□□□ -0.37
GYPC-202ENST00000356887 XCL2Q9UBD3 114 aa12.73□□□□□ -0.37
GYPC-202ENST00000356887 IGLV5-45A0A087WSX0 123 aa12.71□□□□□ -0.37
GYPC-202ENST00000356887 ATXN8Q156A1 80 aa12.71□□□□□ -0.37
GYPC-202ENST00000356887 MEIG1Q5JSS6 88 aa12.71□□□□□ -0.37
GYPC-202ENST00000356887 Q6ZSV7 163 aa12.71□□□□□ -0.38
GYPC-202ENST00000356887 C1orf158Q8N1D5 194 aa12.71□□□□□ -0.38
GYPC-202ENST00000356887 TMEM86BQ8N661 226 aa12.71□□□□□ -0.38
GYPC-202ENST00000356887 IL17DQ8TAD2 202 aa12.71□□□□□ -0.38
GYPC-202ENST00000356887 CDKN2A-AS1Q9UH64 79 aa12.71□□□□□ -0.38
GYPC-202ENST00000356887 TRIAP1O43715 76 aa12.7□□□□□ -0.38
GYPC-202ENST00000356887 TIMM17BO60830 172 aa12.7□□□□□ -0.38
GYPC-202ENST00000356887 LINC01600Q96MT4 127 aa12.7□□□□□ -0.38
GYPC-202ENST00000356887 LINC01620Q4KN68 170 aa12.69□□□□□ -0.38
GYPC-202ENST00000356887 AKAP9Q99996 3911 aa12.69□□□□□ -0.38
GYPC-202ENST00000356887 A0A1B0GX51 115 aa12.69□□□□□ -0.38
GYPC-202ENST00000356887 STHQ8IWL8 128 aa12.69□□□□□ -0.38
GYPC-202ENST00000356887 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.69□□□□□ -0.38
GYPC-202ENST00000356887 TEX15Q9BXT5 2789 aa12.68□□□□□ -0.38
GYPC-202ENST00000356887 MRPL23Q16540 153 aaKnown RBP12.68□□□□□ -0.38
GYPC-202ENST00000356887 TMEM101Q96IK0 257 aa12.68□□□□□ -0.38
GYPC-202ENST00000356887 IGHV3OR16-12A0A075B7B8 117 aa12.68□□□□□ -0.38
GYPC-202ENST00000356887 COX6A2Q02221 97 aa12.68□□□□□ -0.38
GYPC-202ENST00000356887 DGAT2L7PQ6IED9 249 aa12.68□□□□□ -0.38
GYPC-202ENST00000356887 ICOSQ9Y6W8 199 aa12.68□□□□□ -0.38
GYPC-202ENST00000356887 FLNAP21333 2647 aaKnown RBP12.68□□□□□ -0.38
GYPC-202ENST00000356887 NDUFA1O15239 70 aa12.67□□□□□ -0.38
GYPC-202ENST00000356887 TRGV1A0A0A0MS02 117 aa12.66□□□□□ -0.38
GYPC-202ENST00000356887 NPC2P61916 151 aa12.66□□□□□ -0.38
GYPC-202ENST00000356887 TRBV10-2A0A0K0K1G8 114 aa12.65□□□□□ -0.38
GYPC-202ENST00000356887 FAM19A3Q7Z5A8 133 aa12.65□□□□□ -0.38
GYPC-202ENST00000356887 IGLV5-39A0A0G2JS06 123 aa12.65□□□□□ -0.39
GYPC-202ENST00000356887 RPS28P62857 69 aaKnown RBP12.65□□□□□ -0.39
GYPC-202ENST00000356887 LINC00242Q5T6M2 205 aa12.65□□□□□ -0.39
GYPC-202ENST00000356887 TLN2Q9Y4G6 2542 aa12.64□□□□□ -0.39
GYPC-202ENST00000356887 J3KT08 172 aa12.64□□□□□ -0.39
GYPC-202ENST00000356887 LINC00694P0DN24 101 aa12.64□□□□□ -0.39
GYPC-202ENST00000356887 HERVK_113P63121 156 aa12.64□□□□□ -0.39
GYPC-202ENST00000356887 MYO9AB2RTY4 2548 aa12.64□□□□□ -0.39
GYPC-202ENST00000356887 TRBV10-1A0A0K0K1A3 114 aa12.63□□□□□ -0.39
GYPC-202ENST00000356887 DNAJC9-AS1A6NH13 148 aa12.63□□□□□ -0.39
GYPC-202ENST00000356887 CCL24O00175 119 aa12.63□□□□□ -0.39
GYPC-202ENST00000356887 OR13C6PQ8NH95 151 aa12.63□□□□□ -0.39
GYPC-202ENST00000356887 NTN5Q8WTR8 489 aaPredicted RBP12.63□□□□□ -0.39
GYPC-202ENST00000356887 A0A1W2PRX2 142 aa12.63□□□□□ -0.39
GYPC-202ENST00000356887 RPL36AP83881 106 aaKnown RBP12.63□□□□□ -0.39
GYPC-202ENST00000356887 NTM-AS1Q6ZSK4 140 aa12.63□□□□□ -0.39
GYPC-202ENST00000356887 RPL36ALQ969Q0 106 aaKnown RBP12.63□□□□□ -0.39
GYPC-202ENST00000356887 K7EQD1 137 aa12.62□□□□□ -0.39
GYPC-202ENST00000356887 Q6ZTI0 123 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 99 ms