RNA–Protein interactions for RNA: ENST00000355815.8

SREBF1-202, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SREBF1, Length 4,253 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-202ENST00000355815 HIST2H2BCQ6DN03 193 aa10.57□□□□□ -0.72
SREBF1-202ENST00000355815 FLNCQ14315 2725 aa10.57□□□□□ -0.72
SREBF1-202ENST00000355815 AVPP01185 164 aa10.57□□□□□ -0.72
SREBF1-202ENST00000355815 CRIP2P52943 208 aaPredicted RBP10.57□□□□□ -0.72
SREBF1-202ENST00000355815 DAZ2Q13117 558 aaKnown RBP10.57□□□□□ -0.72
SREBF1-202ENST00000355815 DAZ4Q86SG3 579 aaKnown RBP10.57□□□□□ -0.72
SREBF1-202ENST00000355815 PIFOQ8TCI5 191 aa10.57□□□□□ -0.72
SREBF1-202ENST00000355815 DAZ3Q9NR90 486 aaKnown RBP10.57□□□□□ -0.72
SREBF1-202ENST00000355815 HHLA3Q9XRX5 114 aa10.57□□□□□ -0.72
SREBF1-202ENST00000355815 U3KQE9 123 aa10.57□□□□□ -0.72
SREBF1-202ENST00000355815 SS18Q15532 418 aa10.56□□□□□ -0.72
SREBF1-202ENST00000355815 LINC00643Q86TS7 51 aa10.56□□□□□ -0.72
SREBF1-202ENST00000355815 Q8N6K4 173 aa10.56□□□□□ -0.72
SREBF1-202ENST00000355815 DSCR8Q96T75 97 aa10.56□□□□□ -0.72
SREBF1-202ENST00000355815 TIMM17AQ99595 171 aa10.56□□□□□ -0.72
SREBF1-202ENST00000355815 EBI3Q14213 229 aa10.55□□□□□ -0.72
SREBF1-202ENST00000355815 NFE4Q86UQ8 179 aa10.55□□□□□ -0.72
SREBF1-202ENST00000355815 ORMDL1Q9P0S3 153 aa10.55□□□□□ -0.72
SREBF1-202ENST00000355815 IGHV4OR15-8A0A075B7B6 117 aa10.55□□□□□ -0.72
SREBF1-202ENST00000355815 A0A087WW49 117 aa10.55□□□□□ -0.72
SREBF1-202ENST00000355815 IGHG2P01859 326 aa10.55□□□□□ -0.72
SREBF1-202ENST00000355815 IGLV10-54A0A075B6I4 117 aa10.55□□□□□ -0.72
SREBF1-202ENST00000355815 LENEPQ9Y5L5 61 aa10.55□□□□□ -0.72
SREBF1-202ENST00000355815 GHRHP01286 108 aa10.55□□□□□ -0.72
SREBF1-202ENST00000355815 C9orf47Q6ZRZ4 202 aa10.55□□□□□ -0.72
SREBF1-202ENST00000355815 C20orf203Q8NBC4 194 aa10.55□□□□□ -0.72
SREBF1-202ENST00000355815 IGHV4-28A0A0C4DH34 117 aa10.54□□□□□ -0.72
SREBF1-202ENST00000355815 TRBV7-3A0A075B6L6 115 aa10.54□□□□□ -0.72
SREBF1-202ENST00000355815 A0A096LNJ9 63 aa10.54□□□□□ -0.72
SREBF1-202ENST00000355815 CLPSL1A2RUU4 121 aa10.54□□□□□ -0.72
SREBF1-202ENST00000355815 SLPIP03973 132 aa10.54□□□□□ -0.72
SREBF1-202ENST00000355815 PSMB8P28062 276 aa10.54□□□□□ -0.72
SREBF1-202ENST00000355815 UQCRQO14949 82 aa10.53□□□□□ -0.72
SREBF1-202ENST00000355815 TMEM61Q8N0U2 210 aa10.53□□□□□ -0.72
SREBF1-202ENST00000355815 MIR7-3HGQ8N6C7 128 aa10.53□□□□□ -0.72
SREBF1-202ENST00000355815 COX7B2Q8TF08 81 aa10.53□□□□□ -0.72
SREBF1-202ENST00000355815 CFAP46Q8IYW2 2715 aa10.53□□□□□ -0.72
SREBF1-202ENST00000355815 RNF152Q8N8N0 203 aa10.53□□□□□ -0.72
SREBF1-202ENST00000355815 F5H768 121 aa10.52□□□□□ -0.73
SREBF1-202ENST00000355815 LINC00694P0DN24 101 aa10.52□□□□□ -0.73
SREBF1-202ENST00000355815 CDKN2A-AS1Q9UH64 79 aa10.52□□□□□ -0.73
SREBF1-202ENST00000355815 KLK5Q9Y337 293 aaPredicted RBP10.52□□□□□ -0.73
SREBF1-202ENST00000355815 IGHV1-58A0A0C4DH39 117 aa10.52□□□□□ -0.73
SREBF1-202ENST00000355815 TRBV6-1A0A0K0K1D8 114 aa10.52□□□□□ -0.73
SREBF1-202ENST00000355815 Q6ZSV7 163 aa10.52□□□□□ -0.73
SREBF1-202ENST00000355815 NOP10Q9NPE3 64 aaKnown RBP10.52□□□□□ -0.73
SREBF1-202ENST00000355815 J3QKU1 62 aa10.51□□□□□ -0.73
SREBF1-202ENST00000355815 ZNF22P17026 224 aaPredicted RBP10.51□□□□□ -0.73
SREBF1-202ENST00000355815 PIK3CD-AS1Q5SR53 167 aa10.51□□□□□ -0.73
SREBF1-202ENST00000355815 MPLKIPQ8TAP9 179 aa10.51□□□□□ -0.73
SREBF1-202ENST00000355815 DEFB105AQ8NG35 78 aa10.51□□□□□ -0.73
SREBF1-202ENST00000355815 VSIG2Q96IQ7 327 aa10.51□□□□□ -0.73
SREBF1-202ENST00000355815 A6NDX4 124 aa10.5□□□□□ -0.73
SREBF1-202ENST00000355815 ZFAND2AQ8N6M9 145 aa10.5□□□□□ -0.73
SREBF1-202ENST00000355815 VPREB3Q9UKI3 123 aa10.5□□□□□ -0.73
SREBF1-202ENST00000355815 ESM1Q9NQ30 184 aa10.5□□□□□ -0.73
SREBF1-202ENST00000355815 IGHV3-30P01768 117 aa10.5□□□□□ -0.73
SREBF1-202ENST00000355815 ANGP03950 147 aaKnown RBP10.5□□□□□ -0.73
SREBF1-202ENST00000355815 IGHV3-30-5P0DP03 117 aa10.5□□□□□ -0.73
SREBF1-202ENST00000355815 CMC4P56277 68 aaPredicted RBP10.5□□□□□ -0.73
SREBF1-202ENST00000355815 C3orf22Q8N5N4 141 aa10.5□□□□□ -0.73
SREBF1-202ENST00000355815 U3KQK5 164 aa10.49□□□□□ -0.73
SREBF1-202ENST00000355815 NDUFA7O95182 113 aa10.49□□□□□ -0.73
SREBF1-202ENST00000355815 TMEM258P61165 79 aa10.49□□□□□ -0.73
SREBF1-202ENST00000355815 MIAQ16674 131 aa10.49□□□□□ -0.73
SREBF1-202ENST00000355815 WFDC11Q8NEX6 87 aa10.49□□□□□ -0.73
SREBF1-202ENST00000355815 NRACQ8N912 160 aa10.48□□□□□ -0.73
SREBF1-202ENST00000355815 SMIM9A6NGZ8 99 aa10.48□□□□□ -0.73
SREBF1-202ENST00000355815 SPANXDQ9BXN6 97 aa10.48□□□□□ -0.73
SREBF1-202ENST00000355815 PRORYQ9H606 182 aa10.48□□□□□ -0.73
SREBF1-202ENST00000355815 LOC107984640A0A0U1RRK4 108 aa10.47□□□□□ -0.73
SREBF1-202ENST00000355815 C18orf65Q6ZTR6 163 aa10.47□□□□□ -0.73
SREBF1-202ENST00000355815 SCXQ7RTU7 201 aa10.47□□□□□ -0.73
SREBF1-202ENST00000355815 MUC4Q99102 2169 aa10.47□□□□□ -0.73
SREBF1-202ENST00000355815 LINC01619G3V211 115 aa10.47□□□□□ -0.73
SREBF1-202ENST00000355815 HRCT1Q6UXD1 115 aa10.47□□□□□ -0.73
SREBF1-202ENST00000355815 PROK1P58294 105 aa10.47□□□□□ -0.73
SREBF1-202ENST00000355815 F8P00451 2351 aa10.47□□□□□ -0.73
SREBF1-202ENST00000355815 NCR3O14931 201 aa10.46□□□□□ -0.73
SREBF1-202ENST00000355815 ITPR1Q14643 2758 aa10.46□□□□□ -0.74
SREBF1-202ENST00000355815 H0YGX0 51 aa10.45□□□□□ -0.74
SREBF1-202ENST00000355815 COX7A2LO14548 114 aa10.45□□□□□ -0.74
SREBF1-202ENST00000355815 FLNAP21333 2647 aaKnown RBP10.45□□□□□ -0.74
SREBF1-202ENST00000355815 IGLV4-3A0A075B6K6 122 aa10.44□□□□□ -0.74
SREBF1-202ENST00000355815 KRTAP10-9P60411 292 aa10.44□□□□□ -0.74
SREBF1-202ENST00000355815 ELANEP08246 267 aa10.44□□□□□ -0.74
SREBF1-202ENST00000355815 CDIP1Q9H305 208 aa10.44□□□□□ -0.74
SREBF1-202ENST00000355815 WFDC9Q8NEX5 89 aa10.44□□□□□ -0.74
SREBF1-202ENST00000355815 ENHOQ6UWT2 76 aa10.44□□□□□ -0.74
SREBF1-202ENST00000355815 J3QLI3 93 aa10.43□□□□□ -0.74
SREBF1-202ENST00000355815 ZNF580Q9UK33 172 aa10.43□□□□□ -0.74
SREBF1-202ENST00000355815 CSDC2Q9Y534 153 aaKnown RBP10.43□□□□□ -0.74
SREBF1-202ENST00000355815 CHD6Q8TD26 2715 aa10.43□□□□□ -0.74
SREBF1-202ENST00000355815 A0A0J9YX75 114 aa10.43□□□□□ -0.74
SREBF1-202ENST00000355815 TMEM223A0PJW6 202 aa10.43□□□□□ -0.74
SREBF1-202ENST00000355815 H3BUA1 57 aa10.43□□□□□ -0.74
SREBF1-202ENST00000355815 H7C423 109 aa10.43□□□□□ -0.74
SREBF1-202ENST00000355815 A0A087WVE0 104 aa10.42□□□□□ -0.74
SREBF1-202ENST00000355815 RNASE3P12724 160 aaKnown RBP10.42□□□□□ -0.74
SREBF1-202ENST00000355815 ITPR3Q14573 2671 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms