RNA–Protein interactions for RNA: ENST00000355311.9

EBF3-201, Transcript of early B cell factor 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene EBF3, Length 2,993 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EBF3-201ENST00000355311 LINC01619G3V211 115 aa10.08□□□□□ -0.8
EBF3-201ENST00000355311 MUSTN1Q8IVN3 82 aa10.08□□□□□ -0.8
EBF3-201ENST00000355311 SBSPONQ8IVN8 264 aa10.08□□□□□ -0.8
EBF3-201ENST00000355311 Q6YL49 198 aa10.07□□□□□ -0.8
EBF3-201ENST00000355311 IGKV3OR2-268A0A0C4DH90 116 aa10.07□□□□□ -0.8
EBF3-201ENST00000355311 SLC25A29Q8N8R3 303 aa10.07□□□□□ -0.8
EBF3-201ENST00000355311 PPDPFQ9H3Y8 114 aa10.07□□□□□ -0.8
EBF3-201ENST00000355311 IGHV3-33P01772 117 aa10.06□□□□□ -0.8
EBF3-201ENST00000355311 LYRM7Q5U5X0 104 aa10.06□□□□□ -0.8
EBF3-201ENST00000355311 ZNF843Q8N446 348 aa10.06□□□□□ -0.8
EBF3-201ENST00000355311 C9orf85Q96MD7 179 aa10.06□□□□□ -0.8
EBF3-201ENST00000355311 LGALS3P17931 250 aaKnown RBP10.06□□□□□ -0.8
EBF3-201ENST00000355311 J3QQQ9 107 aa10.05□□□□□ -0.8
EBF3-201ENST00000355311 TRAV8-4A0A0B4J246 113 aa10.05□□□□□ -0.8
EBF3-201ENST00000355311 TNFRSF18Q9Y5U5 241 aa10.05□□□□□ -0.8
EBF3-201ENST00000355311 H3BMM0 161 aa10.05□□□□□ -0.8
EBF3-201ENST00000355311 FAM110AQ9BQ89 295 aa10.05□□□□□ -0.8
EBF3-201ENST00000355311 CLEC2BQ92478 149 aa10.04□□□□□ -0.8
EBF3-201ENST00000355311 AMELXQ99217 191 aa10.04□□□□□ -0.8
EBF3-201ENST00000355311 LINC01620Q4KN68 170 aa10.04□□□□□ -0.8
EBF3-201ENST00000355311 TEP1Q99973 2627 aaKnown RBP10.04□□□□□ -0.8
EBF3-201ENST00000355311 TRBV27A0A0K0K1C4 114 aa10.03□□□□□ -0.8
EBF3-201ENST00000355311 ZNF22P17026 224 aaPredicted RBP10.03□□□□□ -0.8
EBF3-201ENST00000355311 RPL35AP18077 110 aaKnown RBP10.03□□□□□ -0.8
EBF3-201ENST00000355311 SMR3AQ99954 134 aa10.03□□□□□ -0.8
EBF3-201ENST00000355311 PDZD2O15018 2839 aa10.03□□□□□ -0.8
EBF3-201ENST00000355311 TRGV1A0A0A0MS02 117 aa10.03□□□□□ -0.8
EBF3-201ENST00000355311 LGALS9O00182 355 aa10.03□□□□□ -0.8
EBF3-201ENST00000355311 TRIAP1O43715 76 aa10.03□□□□□ -0.8
EBF3-201ENST00000355311 HERVK_113P61574 105 aa10.03□□□□□ -0.8
EBF3-201ENST00000355311 C20orf203Q8NBC4 194 aa10.02□□□□□ -0.8
EBF3-201ENST00000355311 TMEM263Q8WUH6 116 aaKnown RBP10.02□□□□□ -0.8
EBF3-201ENST00000355311 IGLV4-3A0A075B6K6 122 aa10.02□□□□□ -0.81
EBF3-201ENST00000355311 I3L3M4 83 aa10.02□□□□□ -0.81
EBF3-201ENST00000355311 DEFB113Q30KQ7 82 aa10.02□□□□□ -0.81
EBF3-201ENST00000355311 MAP6D1Q9H9H5 199 aa10.02□□□□□ -0.81
EBF3-201ENST00000355311 C2orf82Q6UX34 121 aa10.01□□□□□ -0.81
EBF3-201ENST00000355311 NXPH4O95158 308 aa10.01□□□□□ -0.81
EBF3-201ENST00000355311 ESM1Q9NQ30 184 aa10.01□□□□□ -0.81
EBF3-201ENST00000355311 PPP1R17O96001 155 aa10□□□□□ -0.81
EBF3-201ENST00000355311 LINC00467Q9BRT7 94 aa10□□□□□ -0.81
EBF3-201ENST00000355311 LOC107984640A0A0U1RRK4 108 aa10□□□□□ -0.81
EBF3-201ENST00000355311 MRPL23Q16540 153 aaKnown RBP10□□□□□ -0.81
EBF3-201ENST00000355311 NSUN5P1Q3KNT7 163 aa10□□□□□ -0.81
EBF3-201ENST00000355311 MED14OSP0DP75 135 aa9.99□□□□□ -0.81
EBF3-201ENST00000355311 UBE2WQ96B02 151 aa9.99□□□□□ -0.81
EBF3-201ENST00000355311 CITED2Q99967 270 aaPredicted RBP9.99□□□□□ -0.81
EBF3-201ENST00000355311 KLK5Q9Y337 293 aaPredicted RBP9.99□□□□□ -0.81
EBF3-201ENST00000355311 HIVEP1P15822 2718 aa9.99□□□□□ -0.81
EBF3-201ENST00000355311 TRAV13-1A0A0B4J241 112 aa9.99□□□□□ -0.81
EBF3-201ENST00000355311 DSCR9P59020 149 aa9.99□□□□□ -0.81
EBF3-201ENST00000355311 ADAMTSL4-AS1Q5T5F5 129 aa9.98□□□□□ -0.81
EBF3-201ENST00000355311 Q6ZTI0 123 aa9.98□□□□□ -0.81
EBF3-201ENST00000355311 POM121L12Q8N7R1 296 aa9.98□□□□□ -0.81
EBF3-201ENST00000355311 H7C423 109 aa9.98□□□□□ -0.81
EBF3-201ENST00000355311 IGHV3-30-3P0DP02 117 aa9.98□□□□□ -0.81
EBF3-201ENST00000355311 ATXN8Q156A1 80 aa9.98□□□□□ -0.81
EBF3-201ENST00000355311 DEFB114Q30KQ6 69 aa9.98□□□□□ -0.81
EBF3-201ENST00000355311 DGAT2L7PQ6IED9 249 aa9.98□□□□□ -0.81
EBF3-201ENST00000355311 TRGV11A0A075B6L2 103 aa9.97□□□□□ -0.81
EBF3-201ENST00000355311 LOC100131303A0A0U1RQF7 123 aa9.97□□□□□ -0.81
EBF3-201ENST00000355311 LINC00694P0DN24 101 aa9.97□□□□□ -0.81
EBF3-201ENST00000355311 FAM104AQ969W3 186 aa9.97□□□□□ -0.81
EBF3-201ENST00000355311 ODF3L2Q3SX64 289 aa9.97□□□□□ -0.81
EBF3-201ENST00000355311 STHQ8IWL8 128 aa9.97□□□□□ -0.81
EBF3-201ENST00000355311 TIMM17AQ99595 171 aa9.97□□□□□ -0.81
EBF3-201ENST00000355311 M0QXV9 152 aa9.96□□□□□ -0.81
EBF3-201ENST00000355311 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.96□□□□□ -0.81
EBF3-201ENST00000355311 TMEM141Q96I45 108 aa9.96□□□□□ -0.81
EBF3-201ENST00000355311 NOP10Q9NPE3 64 aaKnown RBP9.96□□□□□ -0.81
EBF3-201ENST00000355311 FAM236AA0A1B0GUQ0 79 aa9.96□□□□□ -0.82
EBF3-201ENST00000355311 FAM236BA0A1B0GV22 79 aa9.96□□□□□ -0.82
EBF3-201ENST00000355311 DNAJC9-AS1A6NH13 148 aa9.96□□□□□ -0.82
EBF3-201ENST00000355311 TMEM223A0PJW6 202 aa9.96□□□□□ -0.82
EBF3-201ENST00000355311 M0R2P5 195 aa9.95□□□□□ -0.82
EBF3-201ENST00000355311 RS1O15537 224 aa9.95□□□□□ -0.82
EBF3-201ENST00000355311 COX6A2Q02221 97 aa9.95□□□□□ -0.82
EBF3-201ENST00000355311 YAE1D1Q9NRH1 226 aa9.95□□□□□ -0.82
EBF3-201ENST00000355311 CDKN2A-AS1Q9UH64 79 aa9.95□□□□□ -0.82
EBF3-201ENST00000355311 TRBV10-2A0A0K0K1G8 114 aa9.95□□□□□ -0.82
EBF3-201ENST00000355311 TIMM21Q9BVV7 248 aa9.95□□□□□ -0.82
EBF3-201ENST00000355311 PKD1L1Q8TDX9 2849 aa9.94□□□□□ -0.82
EBF3-201ENST00000355311 A0A096LPF7 62 aa9.93□□□□□ -0.82
EBF3-201ENST00000355311 TRBV6-5A0A0K0K1A5 114 aa9.93□□□□□ -0.82
EBF3-201ENST00000355311 TMEM89A2RUT3 159 aa9.93□□□□□ -0.82
EBF3-201ENST00000355311 CCL24O00175 119 aa9.93□□□□□ -0.82
EBF3-201ENST00000355311 PEMTQ9UBM1 199 aa9.93□□□□□ -0.82
EBF3-201ENST00000355311 A0A0J9YXY3 114 aa9.93□□□□□ -0.82
EBF3-201ENST00000355311 J3QLI3 93 aa9.93□□□□□ -0.82
EBF3-201ENST00000355311 C1orf158Q8N1D5 194 aa9.93□□□□□ -0.82
EBF3-201ENST00000355311 NDUFA12Q9UI09 145 aa9.93□□□□□ -0.82
EBF3-201ENST00000355311 ZNF415Q09FC8 603 aa9.92□□□□□ -0.82
EBF3-201ENST00000355311 CHCHD7Q9BUK0 85 aa9.92□□□□□ -0.82
EBF3-201ENST00000355311 ICOSQ9Y6W8 199 aa9.92□□□□□ -0.82
EBF3-201ENST00000355311 KRTAP1-3Q8IUG1 177 aa9.92□□□□□ -0.82
EBF3-201ENST00000355311 C11orf72Q8NBR9 251 aa9.91□□□□□ -0.82
EBF3-201ENST00000355311 A0A0B4J2C4 111 aa9.9□□□□□ -0.82
EBF3-201ENST00000355311 DEFB4AO15263 64 aa9.9□□□□□ -0.82
EBF3-201ENST00000355311 PAPPA-AS1Q5QFB9 102 aa9.9□□□□□ -0.82
EBF3-201ENST00000355311 ANK3Q12955 4377 aaKnown RBP9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms