RNA–Protein interactions for RNA: ENST00000350148.9

SMAD9-201, Transcript of SMAD family member 9, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMAD9, Length 5,447 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-201ENST00000350148 FUSP35637 526 aaKnown RBP eCLIP9.01□□□□□ -0.97
SMAD9-201ENST00000350148 PMAIP1Q13794 54 aa9.01□□□□□ -0.97
SMAD9-201ENST00000350148 FSHBP01225 129 aa9□□□□□ -0.97
SMAD9-201ENST00000350148 XGP55808 180 aa9□□□□□ -0.97
SMAD9-201ENST00000350148 ZNF561-AS1K7EIQ3 104 aa9□□□□□ -0.97
SMAD9-201ENST00000350148 TCL1BO95988 128 aa9□□□□□ -0.97
SMAD9-201ENST00000350148 ANGP03950 147 aaKnown RBP9□□□□□ -0.97
SMAD9-201ENST00000350148 SERP2Q8N6R1 65 aa9□□□□□ -0.97
SMAD9-201ENST00000350148 LINC00467Q9BRT7 94 aa9□□□□□ -0.97
SMAD9-201ENST00000350148 E9PLD3 99 aa8.99□□□□□ -0.97
SMAD9-201ENST00000350148 PRO0628Q9UI54 55 aa8.99□□□□□ -0.97
SMAD9-201ENST00000350148 RNASE3P12724 160 aaKnown RBP8.99□□□□□ -0.97
SMAD9-201ENST00000350148 DEFB135Q30KP9 77 aa8.99□□□□□ -0.97
SMAD9-201ENST00000350148 ARHGAP32A7KAX9 2087 aa8.99□□□□□ -0.97
SMAD9-201ENST00000350148 PPDPFQ9H3Y8 114 aa8.99□□□□□ -0.97
SMAD9-201ENST00000350148 TRBV6-4A0A1B0GX49 114 aa8.99□□□□□ -0.97
SMAD9-201ENST00000350148 PLXNB1O43157 2135 aa8.99□□□□□ -0.97
SMAD9-201ENST00000350148 C2orf91Q6ZV80 131 aa8.98□□□□□ -0.97
SMAD9-201ENST00000350148 C18orf65Q6ZTR6 163 aa8.98□□□□□ -0.97
SMAD9-201ENST00000350148 M0QY20 66 aa8.98□□□□□ -0.97
SMAD9-201ENST00000350148 IGLV1-51P01701 117 aa8.98□□□□□ -0.97
SMAD9-201ENST00000350148 IMUPQ9GZP8 106 aa8.98□□□□□ -0.97
SMAD9-201ENST00000350148 C11orf21Q9P2W6 132 aa8.98□□□□□ -0.97
SMAD9-201ENST00000350148 TRBV27A0A0K0K1C4 114 aa8.98□□□□□ -0.97
SMAD9-201ENST00000350148 CHKB-CPT1BH3BT56 60 aa8.98□□□□□ -0.97
SMAD9-201ENST00000350148 PRR9Q5T870 116 aa8.98□□□□□ -0.97
SMAD9-201ENST00000350148 CFAP126Q5VTH2 177 aa8.98□□□□□ -0.97
SMAD9-201ENST00000350148 PSCAO43653 123 aa8.97□□□□□ -0.97
SMAD9-201ENST00000350148 A0A0J9YY99 117 aa8.97□□□□□ -0.97
SMAD9-201ENST00000350148 URB1-AS1Q96HZ7 61 aa8.97□□□□□ -0.97
SMAD9-201ENST00000350148 MYO15AQ9UKN7 3530 aa8.97□□□□□ -0.97
SMAD9-201ENST00000350148 SDIM1Q6ZPB5 146 aa8.97□□□□□ -0.97
SMAD9-201ENST00000350148 CSPG4Q6UVK1 2322 aa8.96□□□□□ -0.97
SMAD9-201ENST00000350148 TEX49A0A1B0GTD5 131 aa8.96□□□□□ -0.97
SMAD9-201ENST00000350148 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.96□□□□□ -0.98
SMAD9-201ENST00000350148 PYGO1Q9Y3Y4 419 aa8.96□□□□□ -0.98
SMAD9-201ENST00000350148 A0A0J9YXV3 536 aa8.96□□□□□ -0.98
SMAD9-201ENST00000350148 Q6ZTI0 123 aa8.96□□□□□ -0.98
SMAD9-201ENST00000350148 IL17DQ8TAD2 202 aa8.95□□□□□ -0.98
SMAD9-201ENST00000350148 NDUFC1O43677 76 aa8.95□□□□□ -0.98
SMAD9-201ENST00000350148 RPL39P62891 51 aaKnown RBP8.95□□□□□ -0.98
SMAD9-201ENST00000350148 NRACQ8N912 160 aa8.95□□□□□ -0.98
SMAD9-201ENST00000350148 C14orf132Q9NPU4 83 aa8.95□□□□□ -0.98
SMAD9-201ENST00000350148 CCL18P55774 89 aa8.95□□□□□ -0.98
SMAD9-201ENST00000350148 CLEC2BQ92478 149 aa8.95□□□□□ -0.98
SMAD9-201ENST00000350148 H0YGX0 51 aa8.94□□□□□ -0.98
SMAD9-201ENST00000350148 OXLD1Q5BKU9 147 aa8.94□□□□□ -0.98
SMAD9-201ENST00000350148 Q6Q795 121 aa8.94□□□□□ -0.98
SMAD9-201ENST00000350148 UPK3BQ9BT76 320 aa8.94□□□□□ -0.98
SMAD9-201ENST00000350148 SPEGQ15772 3267 aa8.94□□□□□ -0.98
SMAD9-201ENST00000350148 NEXN-AS1Q8NBZ9 246 aa8.94□□□□□ -0.98
SMAD9-201ENST00000350148 NXPH4O95158 308 aa8.94□□□□□ -0.98
SMAD9-201ENST00000350148 ODF3L2Q3SX64 289 aa8.94□□□□□ -0.98
SMAD9-201ENST00000350148 SERP1Q9Y6X1 66 aa8.94□□□□□ -0.98
SMAD9-201ENST00000350148 A6NED7 52 aa8.93□□□□□ -0.98
SMAD9-201ENST00000350148 JMJD7-PLA2G4BH0Y9G9 81 aa8.93□□□□□ -0.98
SMAD9-201ENST00000350148 COX7A2LO14548 114 aa8.93□□□□□ -0.98
SMAD9-201ENST00000350148 RPL18AQ02543 176 aaKnown RBP8.93□□□□□ -0.98
SMAD9-201ENST00000350148 LOC107984640A0A0U1RRK4 108 aa8.93□□□□□ -0.98
SMAD9-201ENST00000350148 IGKV2D-26A0A0A0MRZ7 120 aa8.92□□□□□ -0.98
SMAD9-201ENST00000350148 IGHV1-58A0A0C4DH39 117 aa8.92□□□□□ -0.98
SMAD9-201ENST00000350148 POLR2KP53803 58 aaKnown RBP8.92□□□□□ -0.98
SMAD9-201ENST00000350148 PRRC2AP48634 2157 aaKnown RBP8.92□□□□□ -0.98
SMAD9-201ENST00000350148 A0A096LPF7 62 aa8.92□□□□□ -0.98
SMAD9-201ENST00000350148 CRYGDP07320 174 aa8.92□□□□□ -0.98
SMAD9-201ENST00000350148 PROK1P58294 105 aa8.92□□□□□ -0.98
SMAD9-201ENST00000350148 RNASE13Q5GAN3 156 aaKnown RBP8.92□□□□□ -0.98
SMAD9-201ENST00000350148 FAM222AQ5U5X8 452 aa8.92□□□□□ -0.98
SMAD9-201ENST00000350148 Q9H8V8 135 aa8.92□□□□□ -0.98
SMAD9-201ENST00000350148 COX7B2Q8TF08 81 aa8.91□□□□□ -0.98
SMAD9-201ENST00000350148 SPTBN4Q9H254 2564 aa8.91□□□□□ -0.98
SMAD9-201ENST00000350148 XCL1P47992 114 aa8.91□□□□□ -0.98
SMAD9-201ENST00000350148 MRPS36P82909 103 aaKnown RBP8.91□□□□□ -0.98
SMAD9-201ENST00000350148 Q6ZQT7 251 aa8.9□□□□□ -0.98
SMAD9-201ENST00000350148 LINC00482Q8N8I6 264 aa8.9□□□□□ -0.98
SMAD9-201ENST00000350148 LINC00526Q96FQ7 95 aa8.9□□□□□ -0.98
SMAD9-201ENST00000350148 DOPEY2Q9Y3R5 2298 aa8.9□□□□□ -0.99
SMAD9-201ENST00000350148 TIRAPP58753 221 aa8.9□□□□□ -0.99
SMAD9-201ENST00000350148 TET2Q6N021 2002 aaPredicted RBP8.89□□□□□ -0.99
SMAD9-201ENST00000350148 UBE2BP63146 152 aa8.89□□□□□ -0.99
SMAD9-201ENST00000350148 NREPQ16612 68 aa8.89□□□□□ -0.99
SMAD9-201ENST00000350148 ATP5EP2Q5VTU8 51 aa8.89□□□□□ -0.99
SMAD9-201ENST00000350148 HIST2H2BDQ6DRA6 164 aa8.89□□□□□ -0.99
SMAD9-201ENST00000350148 C11orf45Q8TAV5 145 aa8.89□□□□□ -0.99
SMAD9-201ENST00000350148 TM2D2Q9BX73 214 aa8.89□□□□□ -0.99
SMAD9-201ENST00000350148 PTPN13Q12923 2485 aa8.89□□□□□ -0.99
SMAD9-201ENST00000350148 USP17L23D6RBM5 183 aa8.89□□□□□ -0.99
SMAD9-201ENST00000350148 SMR3AQ99954 134 aa8.89□□□□□ -0.99
SMAD9-201ENST00000350148 KLK5Q9Y337 293 aaPredicted RBP8.89□□□□□ -0.99
SMAD9-201ENST00000350148 A0A096LNT2 108 aa8.88□□□□□ -0.99
SMAD9-201ENST00000350148 UFSP1Q6NVU6 142 aa8.88□□□□□ -0.99
SMAD9-201ENST00000350148 DOPEY1Q5JWR5 2465 aa8.88□□□□□ -0.99
SMAD9-201ENST00000350148 IGLV4-3A0A075B6K6 122 aa8.88□□□□□ -0.99
SMAD9-201ENST00000350148 FHL3Q13643 280 aa8.88□□□□□ -0.99
SMAD9-201ENST00000350148 ESM1Q9NQ30 184 aa8.87□□□□□ -0.99
SMAD9-201ENST00000350148 NDUFS5O43920 106 aa8.87□□□□□ -0.99
SMAD9-201ENST00000350148 TSHBP01222 138 aa8.87□□□□□ -0.99
SMAD9-201ENST00000350148 UBE2AP49459 152 aa8.87□□□□□ -0.99
SMAD9-201ENST00000350148 MAPKAPK5-AS1Q8N8E1 139 aa8.87□□□□□ -0.99
SMAD9-201ENST00000350148 BEAN1Q3B7T3 259 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms