RNA–Protein interactions for RNA: ENST00000348749.9

CHRNA1-202, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNA1, Length 1,984 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-202ENST00000348749 BRD3OSQ6XYD6 125 aa7.49□□□□□ -1.21
CHRNA1-202ENST00000348749 SPTA1P02549 2419 aa7.49□□□□□ -1.21
CHRNA1-202ENST00000348749 LRBAP50851 2863 aa7.49□□□□□ -1.21
CHRNA1-202ENST00000348749 IGLV5-39A0A0G2JS06 123 aa7.48□□□□□ -1.21
CHRNA1-202ENST00000348749 SOSTDC1Q6X4U4 206 aa7.48□□□□□ -1.21
CHRNA1-202ENST00000348749 PRIMA1Q86XR5 153 aa7.48□□□□□ -1.21
CHRNA1-202ENST00000348749 KIR2DL5BQ8NHK3 375 aa7.48□□□□□ -1.21
CHRNA1-202ENST00000348749 FAM218AQ96MZ4 157 aa7.48□□□□□ -1.21
CHRNA1-202ENST00000348749 CDKN2A-AS1Q9UH64 79 aa7.48□□□□□ -1.21
CHRNA1-202ENST00000348749 PSMB8P28062 276 aa7.48□□□□□ -1.21
CHRNA1-202ENST00000348749 LY6EQ16553 131 aa7.48□□□□□ -1.21
CHRNA1-202ENST00000348749 C10orf105Q8TEF2 133 aa7.48□□□□□ -1.21
CHRNA1-202ENST00000348749 OVOL2Q9BRP0 275 aa7.48□□□□□ -1.21
CHRNA1-202ENST00000348749 OXTP01178 125 aa7.47□□□□□ -1.21
CHRNA1-202ENST00000348749 Q9H8V8 135 aa7.47□□□□□ -1.21
CHRNA1-202ENST00000348749 MED13LQ71F56 2210 aa7.47□□□□□ -1.21
CHRNA1-202ENST00000348749 TRAV13-1A0A0B4J241 112 aa7.46□□□□□ -1.21
CHRNA1-202ENST00000348749 DNAL4O96015 105 aa7.46□□□□□ -1.21
CHRNA1-202ENST00000348749 PF4P02776 101 aa7.46□□□□□ -1.21
CHRNA1-202ENST00000348749 IGHV4-38-2P0DP08 117 aa7.46□□□□□ -1.21
CHRNA1-202ENST00000348749 BLCAPP62952 87 aa7.46□□□□□ -1.21
CHRNA1-202ENST00000348749 Q5XG85 94 aa7.46□□□□□ -1.21
CHRNA1-202ENST00000348749 OBSCN-AS1Q96MR7 158 aa7.46□□□□□ -1.21
CHRNA1-202ENST00000348749 BBC3Q96PG8 261 aaPredicted RBP7.46□□□□□ -1.21
CHRNA1-202ENST00000348749 LAMA5O15230 3695 aa7.46□□□□□ -1.22
CHRNA1-202ENST00000348749 TRAV12-2A0A075B6T6 113 aa7.46□□□□□ -1.22
CHRNA1-202ENST00000348749 IGHV4-61A0A0C4DH41 118 aa7.46□□□□□ -1.22
CHRNA1-202ENST00000348749 A8MTW9 85 aa7.46□□□□□ -1.22
CHRNA1-202ENST00000348749 RPL28P46779 137 aaKnown RBP7.46□□□□□ -1.22
CHRNA1-202ENST00000348749 HIST2H2BCQ6DN03 193 aa7.46□□□□□ -1.22
CHRNA1-202ENST00000348749 HIST2H2BDQ6DRA6 164 aa7.46□□□□□ -1.22
CHRNA1-202ENST00000348749 ABCA2Q9BZC7 2435 aa7.45□□□□□ -1.22
CHRNA1-202ENST00000348749 MAST4O15021 2626 aa7.45□□□□□ -1.22
CHRNA1-202ENST00000348749 MSMBP08118 114 aa7.45□□□□□ -1.22
CHRNA1-202ENST00000348749 SPTBN1Q01082 2364 aaKnown RBP7.45□□□□□ -1.22
CHRNA1-202ENST00000348749 HELZ2Q9BYK8 2649 aaKnown RBP7.45□□□□□ -1.22
CHRNA1-202ENST00000348749 NDUFC2-KCTD14E9PQ53 114 aa7.44□□□□□ -1.22
CHRNA1-202ENST00000348749 FAM19A3Q7Z5A8 133 aa7.44□□□□□ -1.22
CHRNA1-202ENST00000348749 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP7.44□□□□□ -1.22
CHRNA1-202ENST00000348749 DSCR8Q96T75 97 aa7.44□□□□□ -1.22
CHRNA1-202ENST00000348749 LINC00467Q9BRT7 94 aa7.44□□□□□ -1.22
CHRNA1-202ENST00000348749 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.44□□□□□ -1.22
CHRNA1-202ENST00000348749 TRAV13-2A0A0B4J235 113 aa7.44□□□□□ -1.22
CHRNA1-202ENST00000348749 IGKV2-29A2NJV5 120 aaPredicted RBP7.44□□□□□ -1.22
CHRNA1-202ENST00000348749 USP17L23D6RBM5 183 aa7.44□□□□□ -1.22
CHRNA1-202ENST00000348749 F5H768 121 aa7.44□□□□□ -1.22
CHRNA1-202ENST00000348749 LINC01561Q8N1V8 128 aa7.44□□□□□ -1.22
CHRNA1-202ENST00000348749 MRAPQ8TCY5 172 aa7.44□□□□□ -1.22
CHRNA1-202ENST00000348749 ZNF625Q96I27 306 aaPredicted RBP7.44□□□□□ -1.22
CHRNA1-202ENST00000348749 ITPR1Q14643 2758 aa7.44□□□□□ -1.22
CHRNA1-202ENST00000348749 SYNJ2BPP57105 145 aa7.43□□□□□ -1.22
CHRNA1-202ENST00000348749 C4orf26Q17RF5 130 aa7.43□□□□□ -1.22
CHRNA1-202ENST00000348749 SPINK13Q1W4C9 94 aa7.43□□□□□ -1.22
CHRNA1-202ENST00000348749 Q9HAA7 133 aa7.43□□□□□ -1.22
CHRNA1-202ENST00000348749 IGSF10Q6WRI0 2623 aa7.43□□□□□ -1.22
CHRNA1-202ENST00000348749 IGKV3D-7A0A0C4DH55 119 aa7.42□□□□□ -1.22
CHRNA1-202ENST00000348749 PLA2G2AP14555 144 aa7.42□□□□□ -1.22
CHRNA1-202ENST00000348749 PROK1P58294 105 aa7.42□□□□□ -1.22
CHRNA1-202ENST00000348749 COX6A2Q02221 97 aa7.42□□□□□ -1.22
CHRNA1-202ENST00000348749 LINC00846Q9NV44 126 aa7.42□□□□□ -1.22
CHRNA1-202ENST00000348749 SMIM1B2RUZ4 78 aa7.42□□□□□ -1.22
CHRNA1-202ENST00000348749 B4DSR2 109 aa7.42□□□□□ -1.22
CHRNA1-202ENST00000348749 CCL19Q99731 98 aa7.42□□□□□ -1.22
CHRNA1-202ENST00000348749 IGHV3-73A0A0B4J1V6 119 aa7.41□□□□□ -1.22
CHRNA1-202ENST00000348749 NDUFC2O95298 119 aa7.41□□□□□ -1.22
CHRNA1-202ENST00000348749 EDN2P20800 178 aa7.41□□□□□ -1.22
CHRNA1-202ENST00000348749 DSCR9P59020 149 aa7.41□□□□□ -1.22
CHRNA1-202ENST00000348749 LINC00242Q5T6M2 205 aa7.41□□□□□ -1.22
CHRNA1-202ENST00000348749 HRCT1Q6UXD1 115 aa7.41□□□□□ -1.22
CHRNA1-202ENST00000348749 C14orf132Q9NPU4 83 aa7.41□□□□□ -1.22
CHRNA1-202ENST00000348749 HIVEP3Q5T1R4 2406 aa7.41□□□□□ -1.22
CHRNA1-202ENST00000348749 COL6A6A6NMZ7 2263 aa7.41□□□□□ -1.22
CHRNA1-202ENST00000348749 IGHV3OR16-12A0A075B7B8 117 aa7.4□□□□□ -1.22
CHRNA1-202ENST00000348749 A0A0U1RRA0 63 aa7.4□□□□□ -1.22
CHRNA1-202ENST00000348749 CYSRT1A8MQ03 144 aa7.4□□□□□ -1.22
CHRNA1-202ENST00000348749 IGKV3-20P01619 116 aa7.4□□□□□ -1.22
CHRNA1-202ENST00000348749 NACAE9PAV3 2078 aa7.4□□□□□ -1.22
CHRNA1-202ENST00000348749 A0A087WVE0 104 aa7.4□□□□□ -1.23
CHRNA1-202ENST00000348749 CRPP02741 224 aa7.4□□□□□ -1.23
CHRNA1-202ENST00000348749 C9orf129Q5T035 196 aaKnown RBP7.4□□□□□ -1.23
CHRNA1-202ENST00000348749 UBE2E2Q96LR5 201 aa7.4□□□□□ -1.23
CHRNA1-202ENST00000348749 H0YGX0 51 aa7.39□□□□□ -1.23
CHRNA1-202ENST00000348749 C19orf84I3L1E1 186 aa7.39□□□□□ -1.23
CHRNA1-202ENST00000348749 J3QKU1 62 aa7.39□□□□□ -1.23
CHRNA1-202ENST00000348749 J3QLI3 93 aa7.39□□□□□ -1.23
CHRNA1-202ENST00000348749 RS1O15537 224 aa7.39□□□□□ -1.23
CHRNA1-202ENST00000348749 HOXD3P31249 432 aaPredicted RBP7.39□□□□□ -1.23
CHRNA1-202ENST00000348749 FHL2Q14192 279 aa7.39□□□□□ -1.23
CHRNA1-202ENST00000348749 DGAT2L7PQ6IED9 249 aa7.39□□□□□ -1.23
CHRNA1-202ENST00000348749 Q6ZSN1 163 aa7.39□□□□□ -1.23
CHRNA1-202ENST00000348749 Q9UF83 564 aa7.39□□□□□ -1.23
CHRNA1-202ENST00000348749 NAV2Q8IVL1 2488 aa7.38□□□□□ -1.23
CHRNA1-202ENST00000348749 IGHV4-30-2A0A087WSY4 118 aa7.38□□□□□ -1.23
CHRNA1-202ENST00000348749 A0A087WYN8 130 aa7.38□□□□□ -1.23
CHRNA1-202ENST00000348749 IGHV3-53P01767 116 aa7.38□□□□□ -1.23
CHRNA1-202ENST00000348749 ATP5EP2Q5VTU8 51 aa7.38□□□□□ -1.23
CHRNA1-202ENST00000348749 NBASA2RRP1 2371 aa7.37□□□□□ -1.23
CHRNA1-202ENST00000348749 CSMD1Q96PZ7 3565 aa7.37□□□□□ -1.23
CHRNA1-202ENST00000348749 EPM2AB3EWF7 344 aa7.37□□□□□ -1.23
CHRNA1-202ENST00000348749 RBMY1A1P0DJD3 496 aaKnown RBP7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms