RNA–Protein interactions for RNA: ENST00000348495.10

SSBP4-202, Transcript of single stranded DNA binding protein 4, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SSBP4, Length 1,721 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-202ENST00000348495 A0A087WX48 190 aa18.41■□□□□ 0.54
SSBP4-202ENST00000348495 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP18.41■□□□□ 0.54
SSBP4-202ENST00000348495 DNAH10OSP0CZ25 163 aa18.41■□□□□ 0.54
SSBP4-202ENST00000348495 DGAT2L7PQ6IED9 249 aa18.41■□□□□ 0.54
SSBP4-202ENST00000348495 IFI27L1Q96BM0 104 aa18.41■□□□□ 0.54
SSBP4-202ENST00000348495 CDC42SE2Q9NRR3 84 aa18.41■□□□□ 0.54
SSBP4-202ENST00000348495 LINC01556Q5JQF7 62 aa18.4■□□□□ 0.54
SSBP4-202ENST00000348495 Q6ZUT4 128 aa18.4■□□□□ 0.54
SSBP4-202ENST00000348495 TMEM101Q96IK0 257 aa18.4■□□□□ 0.54
SSBP4-202ENST00000348495 UBE2DNLQ8IWF7 75 aa18.4■□□□□ 0.54
SSBP4-202ENST00000348495 SIVA1O15304 175 aa18.39■□□□□ 0.53
SSBP4-202ENST00000348495 ZNF664Q8N3J9 261 aa18.39■□□□□ 0.53
SSBP4-202ENST00000348495 BAALCQ8WXS3 180 aa18.37■□□□□ 0.53
SSBP4-202ENST00000348495 AMELXQ99217 191 aa18.37■□□□□ 0.53
SSBP4-202ENST00000348495 Q9H8V8 135 aa18.37■□□□□ 0.53
SSBP4-202ENST00000348495 IGHV3-30P01768 117 aa18.36■□□□□ 0.53
SSBP4-202ENST00000348495 IGHV3-33P01772 117 aa18.36■□□□□ 0.53
SSBP4-202ENST00000348495 IGHV3-30-3P0DP02 117 aa18.36■□□□□ 0.53
SSBP4-202ENST00000348495 IGHV3-30-5P0DP03 117 aa18.36■□□□□ 0.53
SSBP4-202ENST00000348495 RNASE13Q5GAN3 156 aaKnown RBP18.35■□□□□ 0.53
SSBP4-202ENST00000348495 PAPPA-AS1Q5QFB9 102 aa18.35■□□□□ 0.53
SSBP4-202ENST00000348495 Q6ZN92 141 aa18.35■□□□□ 0.53
SSBP4-202ENST00000348495 ZC2HC1BQ5TFG8 222 aa18.34■□□□□ 0.53
SSBP4-202ENST00000348495 LGALS9CQ6DKI2 356 aa18.34■□□□□ 0.53
SSBP4-202ENST00000348495 MAP1LC3CQ9BXW4 147 aa18.34■□□□□ 0.53
SSBP4-202ENST00000348495 C3orf79P0CE67 100 aa18.33■□□□□ 0.52
SSBP4-202ENST00000348495 VCX2Q9H322 139 aa18.33■□□□□ 0.52
SSBP4-202ENST00000348495 ANGP03950 147 aaKnown RBP18.32■□□□□ 0.52
SSBP4-202ENST00000348495 LYSTQ99698 3801 aa18.32■□□□□ 0.52
SSBP4-202ENST00000348495 SYS1-DBNDD2H3BUS1 97 aa18.32■□□□□ 0.52
SSBP4-202ENST00000348495 PRSS1P07477 247 aa18.32■□□□□ 0.52
SSBP4-202ENST00000348495 PMVKQ15126 192 aa18.32■□□□□ 0.52
SSBP4-202ENST00000348495 TEX43Q6ZNM6 134 aa18.32■□□□□ 0.52
SSBP4-202ENST00000348495 CST9LQ9H4G1 147 aa18.32■□□□□ 0.52
SSBP4-202ENST00000348495 LINC00269Q8N2A0 174 aa18.31■□□□□ 0.52
SSBP4-202ENST00000348495 KLK12Q9UKR0 248 aa18.31■□□□□ 0.52
SSBP4-202ENST00000348495 SPATA12Q7Z6I5 190 aa18.3■□□□□ 0.52
SSBP4-202ENST00000348495 OR10D4PQ8NGN7 298 aa18.3■□□□□ 0.52
SSBP4-202ENST00000348495 PRR34Q9NV39 138 aa18.3■□□□□ 0.52
SSBP4-202ENST00000348495 VPS13DQ5THJ4 4388 aa18.3■□□□□ 0.52
SSBP4-202ENST00000348495 TRAV12-1A0A0B4J245 112 aa18.29■□□□□ 0.52
SSBP4-202ENST00000348495 PRSS29PA6NIE9 313 aa18.29■□□□□ 0.52
SSBP4-202ENST00000348495 KRTDAPP60985 99 aa18.29■□□□□ 0.52
SSBP4-202ENST00000348495 DNAH1Q9P2D7 4330 aa18.28■□□□□ 0.52
SSBP4-202ENST00000348495 REG3AQ06141 175 aa18.27■□□□□ 0.52
SSBP4-202ENST00000348495 H0Y8G0 127 aa18.26■□□□□ 0.51
SSBP4-202ENST00000348495 K7EP13 123 aa18.26■□□□□ 0.51
SSBP4-202ENST00000348495 LINC00476Q8WZB0 136 aa18.26■□□□□ 0.51
SSBP4-202ENST00000348495 C2orf88Q9BSF0 95 aa18.26■□□□□ 0.51
SSBP4-202ENST00000348495 CLPSL2Q6UWE3 100 aa18.26■□□□□ 0.51
SSBP4-202ENST00000348495 PET117Q6UWS5 81 aa18.26■□□□□ 0.51
SSBP4-202ENST00000348495 ENHOQ6UWT2 76 aa18.26■□□□□ 0.51
SSBP4-202ENST00000348495 ODF1Q14990 250 aa18.25■□□□□ 0.51
SSBP4-202ENST00000348495 UBE2D1P51668 147 aa18.24■□□□□ 0.51
SSBP4-202ENST00000348495 C10orf126Q8N4M7 172 aa18.23■□□□□ 0.51
SSBP4-202ENST00000348495 KRTAP1-5Q9BYS1 174 aa18.23■□□□□ 0.51
SSBP4-202ENST00000348495 TRAV9-2A0A087WT02 112 aa18.23■□□□□ 0.51
SSBP4-202ENST00000348495 TRAV13-1A0A0B4J241 112 aa18.23■□□□□ 0.51
SSBP4-202ENST00000348495 LOC105371267A0A1B0GV96 52 aa18.23■□□□□ 0.51
SSBP4-202ENST00000348495 IBA57-AS1B1ANH7 110 aa18.23■□□□□ 0.51
SSBP4-202ENST00000348495 IGKV3OR2-268A0A0C4DH90 116 aa18.22■□□□□ 0.51
SSBP4-202ENST00000348495 LINC00959A0A1B0GUT2 108 aa18.22■□□□□ 0.51
SSBP4-202ENST00000348495 LINC01545Q5VT33 79 aa18.22■□□□□ 0.51
SSBP4-202ENST00000348495 UBE2WQ96B02 151 aa18.22■□□□□ 0.51
SSBP4-202ENST00000348495 FAM19A3Q7Z5A8 133 aa18.21■□□□□ 0.51
SSBP4-202ENST00000348495 CHTOPQ9Y3Y2 248 aaKnown RBP18.21■□□□□ 0.51
SSBP4-202ENST00000348495 IGLV4-69A0A075B6H9 119 aa18.2■□□□□ 0.5
SSBP4-202ENST00000348495 MRPL35Q9NZE8 188 aaKnown RBP18.2■□□□□ 0.5
SSBP4-202ENST00000348495 F8VRH5 84 aa18.2■□□□□ 0.5
SSBP4-202ENST00000348495 LY6G6CO95867 125 aa18.2■□□□□ 0.5
SSBP4-202ENST00000348495 CRPP02741 224 aa18.2■□□□□ 0.5
SSBP4-202ENST00000348495 NBDYA0A0U1RRE5 68 aa18.19■□□□□ 0.5
SSBP4-202ENST00000348495 LINC00242Q5T6M2 205 aa18.19■□□□□ 0.5
SSBP4-202ENST00000348495 A0A0J9YXV3 536 aa18.18■□□□□ 0.5
SSBP4-202ENST00000348495 CCL25O15444 150 aa18.18■□□□□ 0.5
SSBP4-202ENST00000348495 MIAQ16674 131 aa18.18■□□□□ 0.5
SSBP4-202ENST00000348495 PMCHL2Q9BQD1 86 aa18.18■□□□□ 0.5
SSBP4-202ENST00000348495 IGLC3P0DOY3 106 aa18.18■□□□□ 0.5
SSBP4-202ENST00000348495 ALMS1Q8TCU4 4167 aa18.17■□□□□ 0.5
SSBP4-202ENST00000348495 SS18Q15532 418 aa18.16■□□□□ 0.5
SSBP4-202ENST00000348495 TTC32Q5I0X7 151 aa18.16■□□□□ 0.5
SSBP4-202ENST00000348495 TRAV8-4A0A0B4J246 113 aa18.15■□□□□ 0.5
SSBP4-202ENST00000348495 NFE4Q86UQ8 179 aa18.15■□□□□ 0.5
SSBP4-202ENST00000348495 TINCRA0A1B0GVN0 87 aa18.15■□□□□ 0.5
SSBP4-202ENST00000348495 IGLV10-54A0A075B6I4 117 aa18.14■□□□□ 0.49
SSBP4-202ENST00000348495 TRAV8-3A0A0A6YYJ7 113 aa18.14■□□□□ 0.49
SSBP4-202ENST00000348495 C20orf202A1L168 122 aa18.14■□□□□ 0.49
SSBP4-202ENST00000348495 AKR1D1P51857 326 aa18.14■□□□□ 0.49
SSBP4-202ENST00000348495 COX6A2Q02221 97 aa18.14■□□□□ 0.49
SSBP4-202ENST00000348495 C11orf86A6NJI1 115 aa18.13■□□□□ 0.49
SSBP4-202ENST00000348495 SEC11AP67812 179 aa18.13■□□□□ 0.49
SSBP4-202ENST00000348495 JOSD1Q15040 202 aaPredicted RBP18.13■□□□□ 0.49
SSBP4-202ENST00000348495 CHCHD10Q8WYQ3 142 aaPredicted RBP18.13■□□□□ 0.49
SSBP4-202ENST00000348495 DPM2O94777 84 aa18.12■□□□□ 0.49
SSBP4-202ENST00000348495 CHAC1Q9BUX1 264 aa18.12■□□□□ 0.49
SSBP4-202ENST00000348495 PLNP26678 52 aa18.12■□□□□ 0.49
SSBP4-202ENST00000348495 IGLV5-45A0A087WSX0 123 aa18.11■□□□□ 0.49
SSBP4-202ENST00000348495 XCL1P47992 114 aa18.11■□□□□ 0.49
SSBP4-202ENST00000348495 KRTAP26-1Q6PEX3 210 aa18.11■□□□□ 0.49
SSBP4-202ENST00000348495 Q6ZR54 194 aa18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 78.9 ms