RNA–Protein interactions for RNA: ENST00000344280.7

CCDC38-201, Transcript of coiled-coil domain containing 38, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC38, Length 2,277 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-201ENST00000344280 TCL1BO95988 128 aa15.34■□□□□ 0.05
CCDC38-201ENST00000344280 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP15.34■□□□□ 0.05
CCDC38-201ENST00000344280 VSIG2Q96IQ7 327 aa15.34■□□□□ 0.05
CCDC38-201ENST00000344280 LINC00694P0DN24 101 aa15.33■□□□□ 0.05
CCDC38-201ENST00000344280 RNASE1P07998 156 aaKnown RBP15.33■□□□□ 0.04
CCDC38-201ENST00000344280 ADAMTSL4-AS1Q5T5F5 129 aa15.33■□□□□ 0.04
CCDC38-201ENST00000344280 TMEM263Q8WUH6 116 aaKnown RBP15.33■□□□□ 0.04
CCDC38-201ENST00000344280 NOP10Q9NPE3 64 aaKnown RBP15.32■□□□□ 0.04
CCDC38-201ENST00000344280 NDUFA12Q9UI09 145 aa15.32■□□□□ 0.04
CCDC38-201ENST00000344280 ZNF418Q8TF45 676 aaPredicted RBP15.32■□□□□ 0.04
CCDC38-201ENST00000344280 CDKN2A-AS1Q9UH64 79 aa15.32■□□□□ 0.04
CCDC38-201ENST00000344280 C16orf95Q9H693 158 aa15.31■□□□□ 0.04
CCDC38-201ENST00000344280 H7C2G1 150 aa15.31■□□□□ 0.04
CCDC38-201ENST00000344280 NDUFA7O95182 113 aa15.31■□□□□ 0.04
CCDC38-201ENST00000344280 IGHV3-33P01772 117 aa15.3■□□□□ 0.04
CCDC38-201ENST00000344280 RPL35AP18077 110 aaKnown RBP15.3■□□□□ 0.04
CCDC38-201ENST00000344280 COX6A2Q02221 97 aa15.3■□□□□ 0.04
CCDC38-201ENST00000344280 NTM-AS1Q6ZSK4 140 aa15.3■□□□□ 0.04
CCDC38-201ENST00000344280 GEMIN7Q9H840 131 aaKnown RBP15.3■□□□□ 0.04
CCDC38-201ENST00000344280 FASNP49327 2511 aaKnown RBP15.3■□□□□ 0.04
CCDC38-201ENST00000344280 C19orf73Q9NVV2 129 aa15.29■□□□□ 0.04
CCDC38-201ENST00000344280 K7EQD1 137 aa15.29■□□□□ 0.04
CCDC38-201ENST00000344280 DGAT2L7PQ6IED9 249 aa15.29■□□□□ 0.04
CCDC38-201ENST00000344280 PLAC8L1A1L4L8 177 aa15.28■□□□□ 0.04
CCDC38-201ENST00000344280 PLA2G2AP14555 144 aa15.28■□□□□ 0.04
CCDC38-201ENST00000344280 PRSS2P07478 247 aa15.28■□□□□ 0.04
CCDC38-201ENST00000344280 A0A0B4J2C4 111 aa15.27■□□□□ 0.04
CCDC38-201ENST00000344280 GAGE12JA6NER3 117 aa15.27■□□□□ 0.04
CCDC38-201ENST00000344280 IGLV1-51P01701 117 aa15.27■□□□□ 0.04
CCDC38-201ENST00000344280 SCGB1C2P0DMR2 95 aa15.27■□□□□ 0.04
CCDC38-201ENST00000344280 NPC2P61916 151 aa15.27■□□□□ 0.04
CCDC38-201ENST00000344280 GAGE4Q13068 117 aa15.27■□□□□ 0.04
CCDC38-201ENST00000344280 GAGE5Q13069 117 aa15.27■□□□□ 0.04
CCDC38-201ENST00000344280 TRAV4A0A0B4J268 109 aa15.26■□□□□ 0.03
CCDC38-201ENST00000344280 RPL36AP83881 106 aaKnown RBP15.26■□□□□ 0.03
CCDC38-201ENST00000344280 RPL36ALQ969Q0 106 aaKnown RBP15.26■□□□□ 0.03
CCDC38-201ENST00000344280 LYRM7Q5U5X0 104 aa15.26■□□□□ 0.03
CCDC38-201ENST00000344280 SMR3AQ99954 134 aa15.26■□□□□ 0.03
CCDC38-201ENST00000344280 ZFAND6Q6FIF0 208 aa15.25■□□□□ 0.03
CCDC38-201ENST00000344280 TMEM101Q96IK0 257 aa15.25■□□□□ 0.03
CCDC38-201ENST00000344280 ERG28Q9UKR5 140 aa15.25■□□□□ 0.03
CCDC38-201ENST00000344280 IGLV5-45A0A087WSX0 123 aa15.24■□□□□ 0.03
CCDC38-201ENST00000344280 LINC00242Q5T6M2 205 aa15.24■□□□□ 0.03
CCDC38-201ENST00000344280 TRBV10-1A0A0K0K1A3 114 aa15.24■□□□□ 0.03
CCDC38-201ENST00000344280 TIRAPP58753 221 aa15.24■□□□□ 0.03
CCDC38-201ENST00000344280 TRBV20-1A0A075B6N2 111 aa15.23■□□□□ 0.03
CCDC38-201ENST00000344280 GAGE7O76087 117 aa15.23■□□□□ 0.03
CCDC38-201ENST00000344280 GAGE12FP0CL80 117 aa15.23■□□□□ 0.03
CCDC38-201ENST00000344280 GAGE12GP0CL81 117 aa15.23■□□□□ 0.03
CCDC38-201ENST00000344280 GAGE12IP0CL82 117 aa15.23■□□□□ 0.03
CCDC38-201ENST00000344280 DAZ2Q13117 558 aaKnown RBP15.23■□□□□ 0.03
CCDC38-201ENST00000344280 SIGMAR1Q99720 223 aa15.23■□□□□ 0.03
CCDC38-201ENST00000344280 C1QTNF4Q9BXJ3 329 aa15.23■□□□□ 0.03
CCDC38-201ENST00000344280 HIVEP2P31629 2446 aa15.23■□□□□ 0.03
CCDC38-201ENST00000344280 LOC100131303A0A0U1RQF7 123 aa15.23■□□□□ 0.03
CCDC38-201ENST00000344280 J3QR89 54 aa15.23■□□□□ 0.03
CCDC38-201ENST00000344280 DAND5Q8N907 189 aa15.23■□□□□ 0.03
CCDC38-201ENST00000344280 CSNK1G2-AS1Q8NCQ2 148 aa15.23■□□□□ 0.03
CCDC38-201ENST00000344280 TRAV16A0A0A6YYK6 109 aaPredicted RBP15.22■□□□□ 0.03
CCDC38-201ENST00000344280 FOXI1Q12951 378 aa15.22■□□□□ 0.03
CCDC38-201ENST00000344280 SPANXDQ9BXN6 97 aa15.22■□□□□ 0.03
CCDC38-201ENST00000344280 SPANXCQ9NY87 97 aa15.22■□□□□ 0.03
CCDC38-201ENST00000344280 A0A1B0GV72 72 aa15.22■□□□□ 0.03
CCDC38-201ENST00000344280 GAGE12HA6NDE8 117 aa15.22■□□□□ 0.03
CCDC38-201ENST00000344280 DAZ4Q86SG3 579 aaKnown RBP15.22■□□□□ 0.03
CCDC38-201ENST00000344280 SBSPONQ8IVN8 264 aa15.22■□□□□ 0.03
CCDC38-201ENST00000344280 DAZ3Q9NR90 486 aaKnown RBP15.22■□□□□ 0.03
CCDC38-201ENST00000344280 TRAV13-1A0A0B4J241 112 aa15.21■□□□□ 0.03
CCDC38-201ENST00000344280 HILS1P60008 231 aa15.21■□□□□ 0.03
CCDC38-201ENST00000344280 MIAQ16674 131 aa15.21■□□□□ 0.03
CCDC38-201ENST00000344280 GTSF1LQ9H1H1 148 aa15.21■□□□□ 0.03
CCDC38-201ENST00000344280 FN1P02751 2386 aaKnown RBP15.21■□□□□ 0.02
CCDC38-201ENST00000344280 Q1RN00 199 aa15.2■□□□□ 0.02
CCDC38-201ENST00000344280 TRGV2A0A075B6R0 118 aa15.2■□□□□ 0.02
CCDC38-201ENST00000344280 C16orf74Q96GX8 76 aa15.2■□□□□ 0.02
CCDC38-201ENST00000344280 KMT2BQ9UMN6 2715 aaPredicted RBP15.2■□□□□ 0.02
CCDC38-201ENST00000344280 KRTAP10-3P60369 221 aa15.19■□□□□ 0.02
CCDC38-201ENST00000344280 J3QKU1 62 aa15.18■□□□□ 0.02
CCDC38-201ENST00000344280 CMC4P56277 68 aaPredicted RBP15.18■□□□□ 0.02
CCDC38-201ENST00000344280 NOTCH2Q04721 2471 aa15.18■□□□□ 0.02
CCDC38-201ENST00000344280 HERVK_113P63121 156 aa15.18■□□□□ 0.02
CCDC38-201ENST00000344280 ATP6V0E2Q8NHE4 81 aa15.18■□□□□ 0.02
CCDC38-201ENST00000344280 CARD19Q96LW7 228 aa15.18■□□□□ 0.02
CCDC38-201ENST00000344280 FAM110AQ9BQ89 295 aa15.18■□□□□ 0.02
CCDC38-201ENST00000344280 CDC42SE2Q9NRR3 84 aa15.18■□□□□ 0.02
CCDC38-201ENST00000344280 CSDC2Q9Y534 153 aaKnown RBP15.18■□□□□ 0.02
CCDC38-201ENST00000344280 IGLV5-39A0A0G2JS06 123 aa15.17■□□□□ 0.02
CCDC38-201ENST00000344280 NDUFA1O15239 70 aa15.17■□□□□ 0.02
CCDC38-201ENST00000344280 ZNF625Q96I27 306 aaPredicted RBP15.17■□□□□ 0.02
CCDC38-201ENST00000344280 SPATA25Q9BR10 227 aa15.17■□□□□ 0.02
CCDC38-201ENST00000344280 HECTD1Q9ULT8 2610 aa15.17■□□□□ 0.02
CCDC38-201ENST00000344280 VWFP04275 2813 aa15.16■□□□□ 0.02
CCDC38-201ENST00000344280 TRIAP1O43715 76 aa15.16■□□□□ 0.02
CCDC38-201ENST00000344280 SMIM1B2RUZ4 78 aa15.15■□□□□ 0.02
CCDC38-201ENST00000344280 TEN1Q86WV5 123 aa15.15■□□□□ 0.02
CCDC38-201ENST00000344280 Q9H8V8 135 aa15.15■□□□□ 0.02
CCDC38-201ENST00000344280 FAM19A3Q7Z5A8 133 aa15.15■□□□□ 0.02
CCDC38-201ENST00000344280 GCN1Q92616 2671 aaKnown RBP15.15■□□□□ 0.02
CCDC38-201ENST00000344280 A0A0U1RRA0 63 aa15.14■□□□□ 0.01
CCDC38-201ENST00000344280 C9JAW5 83 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms