RNA–Protein interactions for RNA: ENST00000344113.8

SYNE2-202, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNE2, Length 21,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-202ENST00000344113 CAMK2N1Q7Z7J9 78 aa2.79□□□□□ -1.96
SYNE2-202ENST00000344113 Q6ZQY7 126 aa2.79□□□□□ -1.96
SYNE2-202ENST00000344113 PRB2P02812 416 aaPredicted RBP2.79□□□□□ -1.96
SYNE2-202ENST00000344113 NDPQ00604 133 aa2.79□□□□□ -1.96
SYNE2-202ENST00000344113 K7EMT4 169 aa2.79□□□□□ -1.96
SYNE2-202ENST00000344113 FAM19A4Q96LR4 140 aa2.79□□□□□ -1.96
SYNE2-202ENST00000344113 CTSZQ9UBR2 303 aa2.79□□□□□ -1.96
SYNE2-202ENST00000344113 IGLV2-18A0A075B6J9 118 aa2.79□□□□□ -1.96
SYNE2-202ENST00000344113 SEM1Q6ZVN7 128 aa2.79□□□□□ -1.96
SYNE2-202ENST00000344113 MAPKAPK5-AS1Q8N8E1 139 aa2.79□□□□□ -1.96
SYNE2-202ENST00000344113 WFDC5Q8TCV5 224 aa2.79□□□□□ -1.96
SYNE2-202ENST00000344113 TTTY13Q9BZ97 58 aa2.79□□□□□ -1.96
SYNE2-202ENST00000344113 AKAP13Q12802 2813 aa2.79□□□□□ -1.96
SYNE2-202ENST00000344113 DENND4CQ5VZ89 1909 aa2.79□□□□□ -1.96
SYNE2-202ENST00000344113 TRAV10A0A0B4J240 114 aa2.79□□□□□ -1.96
SYNE2-202ENST00000344113 FAM27E3Q08E93 113 aa2.79□□□□□ -1.96
SYNE2-202ENST00000344113 SIP14410 1827 aa2.79□□□□□ -1.96
SYNE2-202ENST00000344113 ZNF491Q8N8L2 437 aa2.79□□□□□ -1.96
SYNE2-202ENST00000344113 NPBQ8NG41 125 aa2.79□□□□□ -1.96
SYNE2-202ENST00000344113 FRMPD3Q5JV73 1810 aa2.79□□□□□ -1.96
SYNE2-202ENST00000344113 ZNF236Q9UL36 1845 aa2.79□□□□□ -1.96
SYNE2-202ENST00000344113 IGIPA6NJ69 53 aa2.79□□□□□ -1.96
SYNE2-202ENST00000344113 IGLV2-14P01704 120 aa2.78□□□□□ -1.96
SYNE2-202ENST00000344113 DEFB131AP59861 70 aa2.78□□□□□ -1.96
SYNE2-202ENST00000344113 CDC42SE1Q9NRR8 79 aa2.78□□□□□ -1.96
SYNE2-202ENST00000344113 LINC00205P59089 165 aa2.78□□□□□ -1.96
SYNE2-202ENST00000344113 SBF1O95248 1867 aa2.78□□□□□ -1.96
SYNE2-202ENST00000344113 GREB1Q4ZG55 1949 aa2.78□□□□□ -1.96
SYNE2-202ENST00000344113 IGKV1-16P04430 117 aa2.78□□□□□ -1.96
SYNE2-202ENST00000344113 RALGAPA2Q2PPJ7 1873 aa2.78□□□□□ -1.96
SYNE2-202ENST00000344113 LINC00474Q9P2X8 69 aa2.78□□□□□ -1.96
SYNE2-202ENST00000344113 DEFB119Q8N690 84 aa2.78□□□□□ -1.96
SYNE2-202ENST00000344113 SPINT4Q6UDR6 99 aa2.78□□□□□ -1.96
SYNE2-202ENST00000344113 OBSL1O75147 1896 aa2.78□□□□□ -1.96
SYNE2-202ENST00000344113 LRCOL1A6NCL2 159 aa2.78□□□□□ -1.96
SYNE2-202ENST00000344113 IGKV1-27A0A075B6S5 117 aa2.78□□□□□ -1.96
SYNE2-202ENST00000344113 MLANAQ16655 118 aa2.78□□□□□ -1.96
SYNE2-202ENST00000344113 LY6HO94772 140 aa2.78□□□□□ -1.96
SYNE2-202ENST00000344113 IGKV3-20P01619 116 aa2.78□□□□□ -1.96
SYNE2-202ENST00000344113 DEFB132Q7Z7B7 95 aa2.78□□□□□ -1.96
SYNE2-202ENST00000344113 RHPN1-AS1Q9BWJ2 59 aa2.78□□□□□ -1.96
SYNE2-202ENST00000344113 DMAC1Q96GE9 116 aa2.78□□□□□ -1.97
SYNE2-202ENST00000344113 NUP98P52948 1817 aa2.78□□□□□ -1.97
SYNE2-202ENST00000344113 IGLV5-45A0A087WSX0 123 aa2.78□□□□□ -1.97
SYNE2-202ENST00000344113 A0A0J9YXV3 536 aa2.78□□□□□ -1.97
SYNE2-202ENST00000344113 TMEM131Q92545 1883 aa2.78□□□□□ -1.97
SYNE2-202ENST00000344113 IGHV3-49A0A0A0MS15 119 aa2.77□□□□□ -1.97
SYNE2-202ENST00000344113 KAAG1Q9UBP8 84 aa2.77□□□□□ -1.97
SYNE2-202ENST00000344113 COL14A1Q05707 1796 aaKnown RBP2.77□□□□□ -1.97
SYNE2-202ENST00000344113 C9orf66Q5T8R8 295 aa2.77□□□□□ -1.97
SYNE2-202ENST00000344113 C5orf67F2Z3F1 127 aa2.77□□□□□ -1.97
SYNE2-202ENST00000344113 K7EIM0 57 aa2.77□□□□□ -1.97
SYNE2-202ENST00000344113 Q8N2B8 174 aa2.77□□□□□ -1.97
SYNE2-202ENST00000344113 SPINK14Q6IE38 97 aa2.77□□□□□ -1.97
SYNE2-202ENST00000344113 POLR2KP53803 58 aaKnown RBP2.77□□□□□ -1.97
SYNE2-202ENST00000344113 KLK9Q2XQG4 91 aa2.77□□□□□ -1.97
SYNE2-202ENST00000344113 C3orf84H3BNL1 204 aa2.77□□□□□ -1.97
SYNE2-202ENST00000344113 PSCAO43653 123 aa2.77□□□□□ -1.97
SYNE2-202ENST00000344113 CDSNQ15517 529 aa2.77□□□□□ -1.97
SYNE2-202ENST00000344113 DEFB105AQ8NG35 78 aa2.77□□□□□ -1.97
SYNE2-202ENST00000344113 LEAP2Q969E1 77 aa2.77□□□□□ -1.97
SYNE2-202ENST00000344113 RLFQ13129 1914 aa2.77□□□□□ -1.97
SYNE2-202ENST00000344113 WT1-ASQ06250 92 aa2.77□□□□□ -1.97
SYNE2-202ENST00000344113 RNASE6Q93091 150 aaKnown RBP2.77□□□□□ -1.97
SYNE2-202ENST00000344113 CCL5P13501 91 aa2.77□□□□□ -1.97
SYNE2-202ENST00000344113 RNASE13Q5GAN3 156 aaKnown RBP2.77□□□□□ -1.97
SYNE2-202ENST00000344113 ZNF837Q96EG3 531 aaPredicted RBP2.77□□□□□ -1.97
SYNE2-202ENST00000344113 IGLV2-11P01706 119 aa2.77□□□□□ -1.97
SYNE2-202ENST00000344113 C11orf71Q6IPW1 123 aa2.77□□□□□ -1.97
SYNE2-202ENST00000344113 C20orf204Q6ZNR8 217 aa2.77□□□□□ -1.97
SYNE2-202ENST00000344113 TNS1Q9HBL0 1735 aaKnown RBP2.77□□□□□ -1.97
SYNE2-202ENST00000344113 MSRB1Q9NZV6 116 aa2.77□□□□□ -1.97
SYNE2-202ENST00000344113 CHD8Q9HCK8 2581 aa2.77□□□□□ -1.97
SYNE2-202ENST00000344113 TRPM7Q96QT4 1865 aa2.77□□□□□ -1.97
SYNE2-202ENST00000344113 M0R378 163 aa2.77□□□□□ -1.97
SYNE2-202ENST00000344113 THSD7BQ9C0I4 1608 aa2.77□□□□□ -1.97
SYNE2-202ENST00000344113 PRR4Q16378 134 aa2.76□□□□□ -1.97
SYNE2-202ENST00000344113 Q8IZM0 81 aa2.76□□□□□ -1.97
SYNE2-202ENST00000344113 PATE1Q8WXA2 126 aa2.76□□□□□ -1.97
SYNE2-202ENST00000344113 NUP210LQ5VU65 1888 aa2.76□□□□□ -1.97
SYNE2-202ENST00000344113 HELZP42694 1942 aaKnown RBP2.76□□□□□ -1.97
SYNE2-202ENST00000344113 C6orf223Q8N319 242 aa2.76□□□□□ -1.97
SYNE2-202ENST00000344113 ARID2Q68CP9 1835 aa2.76□□□□□ -1.97
SYNE2-202ENST00000344113 FHL3Q13643 280 aa2.76□□□□□ -1.97
SYNE2-202ENST00000344113 LINC01554Q52M75 96 aa2.76□□□□□ -1.97
SYNE2-202ENST00000344113 IGLV3-19P01714 112 aa2.76□□□□□ -1.97
SYNE2-202ENST00000344113 IGHV1-2P23083 117 aa2.76□□□□□ -1.97
SYNE2-202ENST00000344113 IGHV7-4-1A0A0J9YVY3 117 aa2.76□□□□□ -1.97
SYNE2-202ENST00000344113 IGHV3-23P01764 117 aa2.76□□□□□ -1.97
SYNE2-202ENST00000344113 CGB3P0DN86 165 aa2.76□□□□□ -1.97
SYNE2-202ENST00000344113 CGB7P0DN87 165 aa2.76□□□□□ -1.97
SYNE2-202ENST00000344113 C1orf64Q8NEQ6 169 aa2.76□□□□□ -1.97
SYNE2-202ENST00000344113 WFDC10BQ8IUB3 73 aa2.76□□□□□ -1.97
SYNE2-202ENST00000344113 SMIM11BQ8TCY0 68 aa2.76□□□□□ -1.97
SYNE2-202ENST00000344113 PLXNA3P51805 1871 aa2.76□□□□□ -1.97
SYNE2-202ENST00000344113 IGHV1-46P01743 117 aa2.76□□□□□ -1.97
SYNE2-202ENST00000344113 ZSWIM8A7E2V4 1837 aa2.76□□□□□ -1.97
SYNE2-202ENST00000344113 ADAMTS9Q9P2N4 1935 aa2.76□□□□□ -1.97
SYNE2-202ENST00000344113 ATG2AQ2TAZ0 1938 aa2.76□□□□□ -1.97
SYNE2-202ENST00000344113 DEFB109BQ30KR1 87 aa2.76□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 113.2 ms