RNA–Protein interactions for RNA: ENST00000343876.6

CCDC141-201, Transcript of coiled-coil domain containing 141, humanhuman

TSL 1 (best)

Gene CCDC141, Length 3,795 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC141-201ENST00000343876 HOXD3P31249 432 aaPredicted RBP3.63□□□□□ -1.83
CCDC141-201ENST00000343876 TMEM75Q8N9X5 138 aa3.63□□□□□ -1.83
CCDC141-201ENST00000343876 MRPL36Q9P0J6 103 aaKnown RBP3.63□□□□□ -1.83
CCDC141-201ENST00000343876 A0A087WWL8 130 aa3.63□□□□□ -1.83
CCDC141-201ENST00000343876 A0A087WZ39 114 aa3.63□□□□□ -1.83
CCDC141-201ENST00000343876 TMEM256-PLSCR3K7ERE1 68 aa3.63□□□□□ -1.83
CCDC141-201ENST00000343876 PAPPA-AS1Q5QFB9 102 aa3.63□□□□□ -1.83
CCDC141-201ENST00000343876 MAPKAPK5-AS1Q8N8E1 139 aa3.63□□□□□ -1.83
CCDC141-201ENST00000343876 SRSF12Q8WXF0 261 aaKnown RBP3.63□□□□□ -1.83
CCDC141-201ENST00000343876 METTL26Q96S19 204 aa3.63□□□□□ -1.83
CCDC141-201ENST00000343876 PRO1854Q9UHT4 67 aa3.63□□□□□ -1.83
CCDC141-201ENST00000343876 A0A096LNJ9 63 aa3.63□□□□□ -1.83
CCDC141-201ENST00000343876 DNAL4O96015 105 aa3.63□□□□□ -1.83
CCDC141-201ENST00000343876 CKS2P33552 79 aa3.63□□□□□ -1.83
CCDC141-201ENST00000343876 SUMO2P61956 95 aaKnown RBP3.63□□□□□ -1.83
CCDC141-201ENST00000343876 FAM104BQ5XKR9 115 aa3.63□□□□□ -1.83
CCDC141-201ENST00000343876 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP3.63□□□□□ -1.83
CCDC141-201ENST00000343876 LRCOL1A6NCL2 159 aa3.62□□□□□ -1.83
CCDC141-201ENST00000343876 LY6LH3BQJ8 138 aa3.62□□□□□ -1.83
CCDC141-201ENST00000343876 H3BUX3 64 aa3.62□□□□□ -1.83
CCDC141-201ENST00000343876 IGHV3-23P01764 117 aa3.62□□□□□ -1.83
CCDC141-201ENST00000343876 PRB2P02812 416 aaPredicted RBP3.62□□□□□ -1.83
CCDC141-201ENST00000343876 PRNTQ86SH4 94 aa3.62□□□□□ -1.83
CCDC141-201ENST00000343876 SNURFQ9Y675 71 aa3.62□□□□□ -1.83
CCDC141-201ENST00000343876 TRAV23DV6A0A075B6W5 121 aa3.62□□□□□ -1.83
CCDC141-201ENST00000343876 IGHV1-69DA0A0B4J2H0 117 aa3.62□□□□□ -1.83
CCDC141-201ENST00000343876 IGHV1-69P01742 117 aa3.62□□□□□ -1.83
CCDC141-201ENST00000343876 RIGQ13278 110 aa3.62□□□□□ -1.83
CCDC141-201ENST00000343876 MRGPRG-AS1Q2M3A8 158 aa3.62□□□□□ -1.83
CCDC141-201ENST00000343876 PSMG4Q5JS54 123 aa3.62□□□□□ -1.83
CCDC141-201ENST00000343876 FAM222AQ5U5X8 452 aa3.62□□□□□ -1.83
CCDC141-201ENST00000343876 LINC00322Q6ZN03 302 aaPredicted RBP3.62□□□□□ -1.83
CCDC141-201ENST00000343876 LAMTOR3Q9UHA4 124 aa3.62□□□□□ -1.83
CCDC141-201ENST00000343876 IGHV1-3A0A0C4DH29 117 aa3.62□□□□□ -1.83
CCDC141-201ENST00000343876 TRBV10-2A0A0K0K1G8 114 aa3.62□□□□□ -1.83
CCDC141-201ENST00000343876 NACAE9PAV3 2078 aa3.62□□□□□ -1.83
CCDC141-201ENST00000343876 EIF4EBP3O60516 100 aaPredicted RBP3.62□□□□□ -1.83
CCDC141-201ENST00000343876 HLA-DMBP28068 263 aa3.62□□□□□ -1.83
CCDC141-201ENST00000343876 WT1-ASQ06250 92 aa3.62□□□□□ -1.83
CCDC141-201ENST00000343876 FHL2Q14192 279 aa3.62□□□□□ -1.83
CCDC141-201ENST00000343876 POM121L12Q8N7R1 296 aa3.62□□□□□ -1.83
CCDC141-201ENST00000343876 TRBV7-6A0A0J9YX20 115 aa3.61□□□□□ -1.83
CCDC141-201ENST00000343876 ODF3BA8MYP8 253 aa3.61□□□□□ -1.83
CCDC141-201ENST00000343876 IGLV2-23P01705 113 aa3.61□□□□□ -1.83
CCDC141-201ENST00000343876 EGR2P11161 476 aaPredicted RBP3.61□□□□□ -1.83
CCDC141-201ENST00000343876 GP9P14770 177 aa3.61□□□□□ -1.83
CCDC141-201ENST00000343876 GYPEP15421 78 aa3.61□□□□□ -1.83
CCDC141-201ENST00000343876 GATA1P15976 413 aaPredicted RBP3.61□□□□□ -1.83
CCDC141-201ENST00000343876 FUSP35637 526 aaKnown RBP eCLIP3.61□□□□□ -1.83
CCDC141-201ENST00000343876 MRPL35Q9NZE8 188 aaKnown RBP3.61□□□□□ -1.83
CCDC141-201ENST00000343876 TMEM14CQ9P0S9 112 aa3.61□□□□□ -1.83
CCDC141-201ENST00000343876 IGHV3OR16-13A0A075B7E8 117 aa3.61□□□□□ -1.83
CCDC141-201ENST00000343876 IGHV3-74A0A0B4J1X5 117 aa3.61□□□□□ -1.83
CCDC141-201ENST00000343876 A0A0B4J2C4 111 aa3.61□□□□□ -1.83
CCDC141-201ENST00000343876 D6R8Y8 96 aa3.61□□□□□ -1.83
CCDC141-201ENST00000343876 G3V318 75 aa3.61□□□□□ -1.83
CCDC141-201ENST00000343876 PSPHP1O15172 72 aa3.61□□□□□ -1.83
CCDC141-201ENST00000343876 ACYP1P07311 99 aa3.61□□□□□ -1.83
CCDC141-201ENST00000343876 NDPQ00604 133 aa3.61□□□□□ -1.83
CCDC141-201ENST00000343876 Q86TA4 180 aa3.61□□□□□ -1.83
CCDC141-201ENST00000343876 LINC01619G3V211 115 aa3.6□□□□□ -1.83
CCDC141-201ENST00000343876 SMKR1H3BMG3 65 aa3.6□□□□□ -1.83
CCDC141-201ENST00000343876 RPL27AP46776 148 aaKnown RBP3.6□□□□□ -1.83
CCDC141-201ENST00000343876 IGFL4Q6B9Z1 124 aa3.6□□□□□ -1.83
CCDC141-201ENST00000343876 C18orf65Q6ZTR6 163 aa3.6□□□□□ -1.83
CCDC141-201ENST00000343876 NDUFA11Q86Y39 141 aa3.6□□□□□ -1.83
CCDC141-201ENST00000343876 DPM3Q9P2X0 92 aa3.6□□□□□ -1.83
CCDC141-201ENST00000343876 DNAH7Q8WXX0 4024 aa3.6□□□□□ -1.83
CCDC141-201ENST00000343876 CFC1BP0CG36 223 aa3.6□□□□□ -1.83
CCDC141-201ENST00000343876 CFC1P0CG37 223 aa3.6□□□□□ -1.83
CCDC141-201ENST00000343876 IGHV3-49A0A0A0MS15 119 aa3.6□□□□□ -1.83
CCDC141-201ENST00000343876 C8orf87E5RJ46 101 aa3.6□□□□□ -1.83
CCDC141-201ENST00000343876 RNASE1P07998 156 aaKnown RBP3.6□□□□□ -1.83
CCDC141-201ENST00000343876 CD164L2Q6UWJ8 174 aa3.6□□□□□ -1.83
CCDC141-201ENST00000343876 FAM19A3Q7Z5A8 133 aa3.6□□□□□ -1.83
CCDC141-201ENST00000343876 IGHV3-66A0A0C4DH42 116 aa3.59□□□□□ -1.83
CCDC141-201ENST00000343876 A0A1B0GUT8 65 aa3.59□□□□□ -1.83
CCDC141-201ENST00000343876 F8WEM9 126 aa3.59□□□□□ -1.83
CCDC141-201ENST00000343876 M0R1W7 72 aa3.59□□□□□ -1.83
CCDC141-201ENST00000343876 FP248Q71RG6 208 aaPredicted RBP3.59□□□□□ -1.83
CCDC141-201ENST00000343876 ORMDL3Q8N138 153 aa3.59□□□□□ -1.83
CCDC141-201ENST00000343876 LYPD1Q8N2G4 141 aa3.59□□□□□ -1.83
CCDC141-201ENST00000343876 IGLV2-11P01706 119 aa3.59□□□□□ -1.83
CCDC141-201ENST00000343876 EBI3Q14213 229 aa3.59□□□□□ -1.83
CCDC141-201ENST00000343876 A0A0A0MQY5 61 aa3.59□□□□□ -1.84
CCDC141-201ENST00000343876 TRAV21A0A0B4J279 112 aa3.59□□□□□ -1.84
CCDC141-201ENST00000343876 DNAJC9-AS1A6NH13 148 aa3.59□□□□□ -1.84
CCDC141-201ENST00000343876 CCKP06307 115 aa3.59□□□□□ -1.84
CCDC141-201ENST00000343876 PSMB8P28062 276 aa3.59□□□□□ -1.84
CCDC141-201ENST00000343876 KRTAP10-3P60369 221 aa3.59□□□□□ -1.84
CCDC141-201ENST00000343876 UBE2D3P61077 147 aa3.59□□□□□ -1.84
CCDC141-201ENST00000343876 UBE2D2P62837 147 aa3.59□□□□□ -1.84
CCDC141-201ENST00000343876 KLHL30-AS1Q8NEE0 82 aa3.59□□□□□ -1.84
CCDC141-201ENST00000343876 ZNF625Q96I27 306 aaPredicted RBP3.59□□□□□ -1.84
CCDC141-201ENST00000343876 FAM223BA6NKX1 122 aa3.58□□□□□ -1.84
CCDC141-201ENST00000343876 LYRM9A8MSI8 78 aa3.58□□□□□ -1.84
CCDC141-201ENST00000343876 XCL1P47992 114 aa3.58□□□□□ -1.84
CCDC141-201ENST00000343876 REG3AQ06141 175 aa3.58□□□□□ -1.84
CCDC141-201ENST00000343876 KLK9Q2XQG4 91 aa3.58□□□□□ -1.84
CCDC141-201ENST00000343876 CLEC2BQ92478 149 aa3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms