RNA–Protein interactions for RNA: ENST00000343524.9

ATG4A-201, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 2

Gene ATG4A, Length 1,941 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-201ENST00000343524 PFN2P35080 140 aa6.03□□□□□ -1.44
ATG4A-201ENST00000343524 VSIG2Q96IQ7 327 aa6.03□□□□□ -1.44
ATG4A-201ENST00000343524 FAM19A4Q96LR4 140 aa6.03□□□□□ -1.44
ATG4A-201ENST00000343524 SERP1Q9Y6X1 66 aa6.03□□□□□ -1.44
ATG4A-201ENST00000343524 FAM236DA0A1B0GTK5 79 aa6.02□□□□□ -1.45
ATG4A-201ENST00000343524 USP17L23D6RBM5 183 aa6.02□□□□□ -1.45
ATG4A-201ENST00000343524 FAM236CP0DP71 79 aa6.02□□□□□ -1.45
ATG4A-201ENST00000343524 CD28P10747 220 aa6.02□□□□□ -1.45
ATG4A-201ENST00000343524 U3KQE9 123 aa6.02□□□□□ -1.45
ATG4A-201ENST00000343524 TRAV12-2A0A075B6T6 113 aa6.01□□□□□ -1.45
ATG4A-201ENST00000343524 CLPSL1A2RUU4 121 aa6.01□□□□□ -1.45
ATG4A-201ENST00000343524 NDUFA1O15239 70 aa6.01□□□□□ -1.45
ATG4A-201ENST00000343524 C15orf32Q32M92 178 aa6.01□□□□□ -1.45
ATG4A-201ENST00000343524 ADAMTSL4-AS1Q5T5F5 129 aa6.01□□□□□ -1.45
ATG4A-201ENST00000343524 VMO1Q7Z5L0 202 aa6.01□□□□□ -1.45
ATG4A-201ENST00000343524 PRIMA1Q86XR5 153 aa6.01□□□□□ -1.45
ATG4A-201ENST00000343524 RNF152Q8N8N0 203 aa6.01□□□□□ -1.45
ATG4A-201ENST00000343524 J3QLI3 93 aa6.01□□□□□ -1.45
ATG4A-201ENST00000343524 OXTP01178 125 aa6.01□□□□□ -1.45
ATG4A-201ENST00000343524 IGHG2P01859 326 aa6.01□□□□□ -1.45
ATG4A-201ENST00000343524 DEFB109BQ30KR1 87 aa6.01□□□□□ -1.45
ATG4A-201ENST00000343524 BEAN1Q3B7T3 259 aa6.01□□□□□ -1.45
ATG4A-201ENST00000343524 C9orf85Q96MD7 179 aa6.01□□□□□ -1.45
ATG4A-201ENST00000343524 PIMREGQ9BSJ6 248 aa6.01□□□□□ -1.45
ATG4A-201ENST00000343524 ATRQ13535 2644 aa6□□□□□ -1.45
ATG4A-201ENST00000343524 IGHV3OR16-10A0A075B7F0 116 aa6□□□□□ -1.45
ATG4A-201ENST00000343524 BCE1O60756 84 aa6□□□□□ -1.45
ATG4A-201ENST00000343524 PLXNB1O43157 2135 aa6□□□□□ -1.45
ATG4A-201ENST00000343524 TRAV12-3A0A0B4J271 114 aa5.99□□□□□ -1.45
ATG4A-201ENST00000343524 EPM2AB3EWF7 344 aa5.99□□□□□ -1.45
ATG4A-201ENST00000343524 NDPQ00604 133 aa5.99□□□□□ -1.45
ATG4A-201ENST00000343524 TMEM243Q9BU79 118 aa5.99□□□□□ -1.45
ATG4A-201ENST00000343524 C1orf43Q9BWL3 253 aa5.99□□□□□ -1.45
ATG4A-201ENST00000343524 STAB1Q9NY15 2570 aa5.99□□□□□ -1.45
ATG4A-201ENST00000343524 MALRD1Q5VYJ5 2156 aa5.99□□□□□ -1.45
ATG4A-201ENST00000343524 TACC2O95359 2948 aa5.99□□□□□ -1.45
ATG4A-201ENST00000343524 RBMY1BA6NDE4 496 aaKnown RBP5.99□□□□□ -1.45
ATG4A-201ENST00000343524 RBMY1EA6NEQ0 496 aaKnown RBP5.99□□□□□ -1.45
ATG4A-201ENST00000343524 M0QY20 66 aa5.99□□□□□ -1.45
ATG4A-201ENST00000343524 RBMY1DP0C7P1 496 aaKnown RBP5.99□□□□□ -1.45
ATG4A-201ENST00000343524 RBMY1A1P0DJD3 496 aaKnown RBP5.99□□□□□ -1.45
ATG4A-201ENST00000343524 RBMY1CP0DJD4 496 aa5.99□□□□□ -1.45
ATG4A-201ENST00000343524 RPL11P62913 178 aaKnown RBP5.99□□□□□ -1.45
ATG4A-201ENST00000343524 RBMY1FQ15415 496 aaKnown RBP5.99□□□□□ -1.45
ATG4A-201ENST00000343524 LINC00308Q8TCZ7 52 aa5.99□□□□□ -1.45
ATG4A-201ENST00000343524 RNASE6Q93091 150 aaKnown RBP5.99□□□□□ -1.45
ATG4A-201ENST00000343524 CSPG4Q6UVK1 2322 aa5.99□□□□□ -1.45
ATG4A-201ENST00000343524 IGHV3OR16-8A0A075B7F1 116 aa5.98□□□□□ -1.45
ATG4A-201ENST00000343524 IGHV3-66A0A0C4DH42 116 aa5.98□□□□□ -1.45
ATG4A-201ENST00000343524 ODF3BA8MYP8 253 aa5.98□□□□□ -1.45
ATG4A-201ENST00000343524 GNRH2O43555 120 aa5.98□□□□□ -1.45
ATG4A-201ENST00000343524 IGFL2Q6UWQ7 119 aa5.98□□□□□ -1.45
ATG4A-201ENST00000343524 SEM1Q6ZVN7 128 aa5.98□□□□□ -1.45
ATG4A-201ENST00000343524 Q8N6K4 173 aa5.98□□□□□ -1.45
ATG4A-201ENST00000343524 CYSTM1Q9H1C7 97 aa5.98□□□□□ -1.45
ATG4A-201ENST00000343524 A0A087WWL8 130 aa5.97□□□□□ -1.45
ATG4A-201ENST00000343524 SMIM26A0A096LP01 95 aa5.97□□□□□ -1.45
ATG4A-201ENST00000343524 TRAV13-2A0A0B4J235 113 aa5.97□□□□□ -1.45
ATG4A-201ENST00000343524 IGHV3-35A0A0C4DH35 117 aa5.97□□□□□ -1.45
ATG4A-201ENST00000343524 ATP5EP56381 51 aaPredicted RBP5.97□□□□□ -1.45
ATG4A-201ENST00000343524 KRTAP10-9P60411 292 aa5.97□□□□□ -1.45
ATG4A-201ENST00000343524 Q6ZSV7 163 aa5.97□□□□□ -1.45
ATG4A-201ENST00000343524 C10orf105Q8TEF2 133 aa5.97□□□□□ -1.45
ATG4A-201ENST00000343524 OPRPNQ99935 248 aaPredicted RBP5.97□□□□□ -1.45
ATG4A-201ENST00000343524 ZNF580Q9UK33 172 aa5.97□□□□□ -1.45
ATG4A-201ENST00000343524 IGHV7-81A0A0B4J1V7 117 aa5.97□□□□□ -1.45
ATG4A-201ENST00000343524 TRBV10-3A0A0K0K1G6 114 aa5.97□□□□□ -1.45
ATG4A-201ENST00000343524 KLLNB2CW77 178 aa5.97□□□□□ -1.45
ATG4A-201ENST00000343524 MINOS1Q5TGZ0 78 aa5.97□□□□□ -1.45
ATG4A-201ENST00000343524 ARFGEF3Q5TH69 2177 aa5.97□□□□□ -1.45
ATG4A-201ENST00000343524 FAM74A4Q5TZK3 123 aa5.97□□□□□ -1.45
ATG4A-201ENST00000343524 HIST2H2BDQ6DRA6 164 aa5.97□□□□□ -1.45
ATG4A-201ENST00000343524 CLEC19AQ6UXS0 136 aa5.97□□□□□ -1.45
ATG4A-201ENST00000343524 C20orf173Q96LM9 149 aa5.97□□□□□ -1.45
ATG4A-201ENST00000343524 CCDC140Q96MF4 163 aa5.97□□□□□ -1.45
ATG4A-201ENST00000343524 UBE2D4Q9Y2X8 147 aa5.97□□□□□ -1.45
ATG4A-201ENST00000343524 MINOS1-NBL1R4GNA1 71 aa5.97□□□□□ -1.45
ATG4A-201ENST00000343524 COL6A5A8TX70 2615 aa5.96□□□□□ -1.46
ATG4A-201ENST00000343524 KNCNA6PVL3 124 aa5.96□□□□□ -1.46
ATG4A-201ENST00000343524 H0YGX0 51 aa5.96□□□□□ -1.46
ATG4A-201ENST00000343524 SOCS3O14543 225 aa5.96□□□□□ -1.46
ATG4A-201ENST00000343524 RPL28P46779 137 aaKnown RBP5.96□□□□□ -1.46
ATG4A-201ENST00000343524 FHL2Q14192 279 aa5.96□□□□□ -1.46
ATG4A-201ENST00000343524 OBSCN-AS1Q96MR7 158 aa5.96□□□□□ -1.46
ATG4A-201ENST00000343524 V9GYY9 64 aa5.96□□□□□ -1.46
ATG4A-201ENST00000343524 IGLV5-45A0A087WSX0 123 aa5.95□□□□□ -1.46
ATG4A-201ENST00000343524 IGKV3D-7A0A0C4DH55 119 aa5.95□□□□□ -1.46
ATG4A-201ENST00000343524 FAM223BA6NKX1 122 aa5.95□□□□□ -1.46
ATG4A-201ENST00000343524 RS1O15537 224 aa5.95□□□□□ -1.46
ATG4A-201ENST00000343524 CRPP02741 224 aa5.95□□□□□ -1.46
ATG4A-201ENST00000343524 FAM223AQ8IWN6 122 aa5.95□□□□□ -1.46
ATG4A-201ENST00000343524 LINC01561Q8N1V8 128 aa5.95□□□□□ -1.46
ATG4A-201ENST00000343524 Q8NA96 180 aa5.95□□□□□ -1.46
ATG4A-201ENST00000343524 IGHV3OR16-13A0A075B7E8 117 aa5.95□□□□□ -1.46
ATG4A-201ENST00000343524 IGHV3-74A0A0B4J1X5 117 aa5.95□□□□□ -1.46
ATG4A-201ENST00000343524 IGF1P05019 195 aa5.95□□□□□ -1.46
ATG4A-201ENST00000343524 BSPH1Q075Z2 132 aa5.95□□□□□ -1.46
ATG4A-201ENST00000343524 ECSCRQ19T08 205 aa5.95□□□□□ -1.46
ATG4A-201ENST00000343524 ATP1A1-AS1Q5TC04 95 aa5.95□□□□□ -1.46
ATG4A-201ENST00000343524 C22orf24Q9Y442 160 aa5.95□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms