RNA–Protein interactions for RNA: ENST00000341807.8

COL22A1-202, Transcript of collagen type XXII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL22A1, Length 3,584 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL22A1-202ENST00000341807 A0A0B4J2C4 111 aa9.62□□□□□ -0.87
COL22A1-202ENST00000341807 EIF4EBP3O60516 100 aaPredicted RBP9.62□□□□□ -0.87
COL22A1-202ENST00000341807 UBE2WQ96B02 151 aa9.61□□□□□ -0.87
COL22A1-202ENST00000341807 VSIG2Q96IQ7 327 aa9.61□□□□□ -0.87
COL22A1-202ENST00000341807 MAP6D1Q9H9H5 199 aa9.61□□□□□ -0.87
COL22A1-202ENST00000341807 PRIMA1Q86XR5 153 aa9.61□□□□□ -0.87
COL22A1-202ENST00000341807 HIVEP2P31629 2446 aa9.6□□□□□ -0.87
COL22A1-202ENST00000341807 RNF183Q96D59 192 aa9.6□□□□□ -0.87
COL22A1-202ENST00000341807 SPANXA1Q9NS26 97 aa9.6□□□□□ -0.87
COL22A1-202ENST00000341807 UBE2L6O14933 153 aa9.6□□□□□ -0.87
COL22A1-202ENST00000341807 TRGV2A0A075B6R0 118 aa9.59□□□□□ -0.87
COL22A1-202ENST00000341807 RPL35AP18077 110 aaKnown RBP9.59□□□□□ -0.87
COL22A1-202ENST00000341807 MRPS36P82909 103 aaKnown RBP9.59□□□□□ -0.87
COL22A1-202ENST00000341807 YAE1D1Q9NRH1 226 aa9.59□□□□□ -0.87
COL22A1-202ENST00000341807 UBE2D4Q9Y2X8 147 aa9.59□□□□□ -0.87
COL22A1-202ENST00000341807 RPL36AP83881 106 aaKnown RBP9.59□□□□□ -0.87
COL22A1-202ENST00000341807 RPL36ALQ969Q0 106 aaKnown RBP9.59□□□□□ -0.87
COL22A1-202ENST00000341807 CLUHP3Q96NS8 147 aa9.59□□□□□ -0.87
COL22A1-202ENST00000341807 MIAQ16674 131 aa9.58□□□□□ -0.88
COL22A1-202ENST00000341807 Q6YL49 198 aa9.58□□□□□ -0.88
COL22A1-202ENST00000341807 C15orf53Q8NAA6 179 aa9.58□□□□□ -0.88
COL22A1-202ENST00000341807 Q96MF0 132 aa9.58□□□□□ -0.88
COL22A1-202ENST00000341807 CHCHD7Q9BUK0 85 aa9.58□□□□□ -0.88
COL22A1-202ENST00000341807 TMEM89A2RUT3 159 aa9.58□□□□□ -0.88
COL22A1-202ENST00000341807 KRTAP10-9P60411 292 aa9.58□□□□□ -0.88
COL22A1-202ENST00000341807 PYGO1Q9Y3Y4 419 aa9.58□□□□□ -0.88
COL22A1-202ENST00000341807 FBN2P35556 2912 aa9.58□□□□□ -0.88
COL22A1-202ENST00000341807 J3QLI3 93 aa9.58□□□□□ -0.88
COL22A1-202ENST00000341807 MXRA5Q9NR99 2828 aa9.57□□□□□ -0.88
COL22A1-202ENST00000341807 TRBV10-2A0A0K0K1G8 114 aa9.57□□□□□ -0.88
COL22A1-202ENST00000341807 TINCRA0A1B0GVN0 87 aa9.57□□□□□ -0.88
COL22A1-202ENST00000341807 CSMD2Q7Z408 3487 aa9.57□□□□□ -0.88
COL22A1-202ENST00000341807 NOP10Q9NPE3 64 aaKnown RBP9.57□□□□□ -0.88
COL22A1-202ENST00000341807 GAGE7O76087 117 aa9.57□□□□□ -0.88
COL22A1-202ENST00000341807 GAGE12FP0CL80 117 aa9.57□□□□□ -0.88
COL22A1-202ENST00000341807 GAGE12GP0CL81 117 aa9.57□□□□□ -0.88
COL22A1-202ENST00000341807 GAGE12IP0CL82 117 aa9.57□□□□□ -0.88
COL22A1-202ENST00000341807 COX6A2Q02221 97 aa9.57□□□□□ -0.88
COL22A1-202ENST00000341807 Q6ZTI0 123 aa9.57□□□□□ -0.88
COL22A1-202ENST00000341807 TRAV4A0A0B4J268 109 aa9.56□□□□□ -0.88
COL22A1-202ENST00000341807 TMEM101Q96IK0 257 aa9.56□□□□□ -0.88
COL22A1-202ENST00000341807 IGHV4-31P0DP07 118 aa9.56□□□□□ -0.88
COL22A1-202ENST00000341807 DEFB114Q30KQ6 69 aa9.55□□□□□ -0.88
COL22A1-202ENST00000341807 LINC00694P0DN24 101 aa9.55□□□□□ -0.88
COL22A1-202ENST00000341807 C11orf68Q9H3H3 251 aaKnown RBP9.55□□□□□ -0.88
COL22A1-202ENST00000341807 NF1P21359 2839 aa9.55□□□□□ -0.88
COL22A1-202ENST00000341807 TRBV30A0A0K0K1B3 111 aa9.54□□□□□ -0.88
COL22A1-202ENST00000341807 B5MCH6 92 aa9.54□□□□□ -0.88
COL22A1-202ENST00000341807 CRLF1O75462 422 aa9.54□□□□□ -0.88
COL22A1-202ENST00000341807 SVIPQ8NHG7 77 aa9.54□□□□□ -0.88
COL22A1-202ENST00000341807 H7C423 109 aa9.53□□□□□ -0.88
COL22A1-202ENST00000341807 GAGE6Q13070 117 aa9.53□□□□□ -0.88
COL22A1-202ENST00000341807 TRGV4A0A0C4DH28 118 aa9.53□□□□□ -0.88
COL22A1-202ENST00000341807 HERVK_113P63121 156 aa9.53□□□□□ -0.88
COL22A1-202ENST00000341807 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.53□□□□□ -0.88
COL22A1-202ENST00000341807 LITAFQ99732 161 aa9.53□□□□□ -0.88
COL22A1-202ENST00000341807 WFDC10AQ9H1F0 79 aa9.53□□□□□ -0.88
COL22A1-202ENST00000341807 SS18L2Q9UHA2 77 aa9.53□□□□□ -0.88
COL22A1-202ENST00000341807 SBSPONQ8IVN8 264 aa9.52□□□□□ -0.89
COL22A1-202ENST00000341807 CHCHD5Q9BSY4 110 aa9.52□□□□□ -0.89
COL22A1-202ENST00000341807 LINC00158P58513 81 aa9.52□□□□□ -0.89
COL22A1-202ENST00000341807 PIK3CD-AS1Q5SR53 167 aa9.52□□□□□ -0.89
COL22A1-202ENST00000341807 ODF3L2Q3SX64 289 aa9.51□□□□□ -0.89
COL22A1-202ENST00000341807 DNAJC30Q96LL9 226 aa9.51□□□□□ -0.89
COL22A1-202ENST00000341807 OR13C6PQ8NH95 151 aa9.51□□□□□ -0.89
COL22A1-202ENST00000341807 LINC00308Q8TCZ7 52 aa9.51□□□□□ -0.89
COL22A1-202ENST00000341807 FAM104AQ969W3 186 aa9.51□□□□□ -0.89
COL22A1-202ENST00000341807 SPANXDQ9BXN6 97 aa9.51□□□□□ -0.89
COL22A1-202ENST00000341807 SPANXCQ9NY87 97 aa9.51□□□□□ -0.89
COL22A1-202ENST00000341807 LINC00242Q5T6M2 205 aa9.5□□□□□ -0.89
COL22A1-202ENST00000341807 FLNAP21333 2647 aaKnown RBP9.5□□□□□ -0.89
COL22A1-202ENST00000341807 LOC100131303A0A0U1RQF7 123 aa9.5□□□□□ -0.89
COL22A1-202ENST00000341807 CCL24O00175 119 aa9.5□□□□□ -0.89
COL22A1-202ENST00000341807 C11orf72Q8NBR9 251 aa9.5□□□□□ -0.89
COL22A1-202ENST00000341807 C4orf3Q8WVX3 66 aa9.5□□□□□ -0.89
COL22A1-202ENST00000341807 IFITM1P13164 125 aa9.5□□□□□ -0.89
COL22A1-202ENST00000341807 PFN2P35080 140 aa9.5□□□□□ -0.89
COL22A1-202ENST00000341807 K7EQD1 137 aa9.49□□□□□ -0.89
COL22A1-202ENST00000341807 RS1O15537 224 aa9.49□□□□□ -0.89
COL22A1-202ENST00000341807 DEFB130BP0DP73 79 aa9.49□□□□□ -0.89
COL22A1-202ENST00000341807 DEFB130AP0DP74 79 aa9.49□□□□□ -0.89
COL22A1-202ENST00000341807 PLA2G2AP14555 144 aa9.49□□□□□ -0.89
COL22A1-202ENST00000341807 TMEM243Q9BU79 118 aa9.49□□□□□ -0.89
COL22A1-202ENST00000341807 C1orf158Q8N1D5 194 aa9.49□□□□□ -0.89
COL22A1-202ENST00000341807 NDUFA1O15239 70 aa9.48□□□□□ -0.89
COL22A1-202ENST00000341807 C3orf56Q8N813 242 aa9.48□□□□□ -0.89
COL22A1-202ENST00000341807 DEFB113Q30KQ7 82 aa9.48□□□□□ -0.89
COL22A1-202ENST00000341807 LST1O00453 97 aa9.47□□□□□ -0.89
COL22A1-202ENST00000341807 C5orf38Q86SI9 138 aa9.47□□□□□ -0.89
COL22A1-202ENST00000341807 CITED2Q99967 270 aaPredicted RBP9.47□□□□□ -0.89
COL22A1-202ENST00000341807 Q9HAA7 133 aa9.47□□□□□ -0.89
COL22A1-202ENST00000341807 H3BT86 120 aa9.47□□□□□ -0.89
COL22A1-202ENST00000341807 TIRAPP58753 221 aa9.47□□□□□ -0.89
COL22A1-202ENST00000341807 HIST2H2BCQ6DN03 193 aa9.47□□□□□ -0.89
COL22A1-202ENST00000341807 A0A096LPF7 62 aa9.46□□□□□ -0.89
COL22A1-202ENST00000341807 NDUFV3P56181 108 aaKnown RBP9.46□□□□□ -0.89
COL22A1-202ENST00000341807 CLPSL2Q6UWE3 100 aa9.46□□□□□ -0.89
COL22A1-202ENST00000341807 CRPP02741 224 aa9.46□□□□□ -0.9
COL22A1-202ENST00000341807 Q8N2B8 174 aa9.46□□□□□ -0.9
COL22A1-202ENST00000341807 SMIM1B2RUZ4 78 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 79.5 ms