RNA–Protein interactions for RNA: ENST00000341360.6

ATP2B4-201, Transcript of ATPase plasma membrane Ca2+ transporting 4, humanhuman

TSL 1 (best) BASIC

Gene ATP2B4, Length 4,658 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B4-201ENST00000341360 KIAA1549Q9HCM3 1950 aa5.78□□□□□ -1.48
ATP2B4-201ENST00000341360 CEP192Q8TEP8 1941 aa5.78□□□□□ -1.48
ATP2B4-201ENST00000341360 TRBV10-2A0A0K0K1G8 114 aa5.78□□□□□ -1.48
ATP2B4-201ENST00000341360 RPL39P62891 51 aaKnown RBP5.78□□□□□ -1.48
ATP2B4-201ENST00000341360 DEFB105AQ8NG35 78 aa5.78□□□□□ -1.48
ATP2B4-201ENST00000341360 C7orf33Q8WU49 177 aa5.78□□□□□ -1.48
ATP2B4-201ENST00000341360 CLUHP3Q96NS8 147 aa5.78□□□□□ -1.48
ATP2B4-201ENST00000341360 IGLV1-40P01703 118 aa5.78□□□□□ -1.48
ATP2B4-201ENST00000341360 Q6ZTI0 123 aa5.78□□□□□ -1.48
ATP2B4-201ENST00000341360 ZNF706Q9Y5V0 76 aaPredicted RBP5.78□□□□□ -1.48
ATP2B4-201ENST00000341360 TRBV6-8A0A0A6YYG3 113 aa5.77□□□□□ -1.49
ATP2B4-201ENST00000341360 NDUFC2O95298 119 aa5.77□□□□□ -1.49
ATP2B4-201ENST00000341360 HIST2H2BDQ6DRA6 164 aa5.77□□□□□ -1.49
ATP2B4-201ENST00000341360 MRPL55Q7Z7F7 128 aaKnown RBP5.77□□□□□ -1.49
ATP2B4-201ENST00000341360 TIMM17BO60830 172 aa5.77□□□□□ -1.49
ATP2B4-201ENST00000341360 WISP2O76076 250 aa5.77□□□□□ -1.49
ATP2B4-201ENST00000341360 LELP1Q5T871 98 aa5.77□□□□□ -1.49
ATP2B4-201ENST00000341360 Q6ZUT4 128 aa5.77□□□□□ -1.49
ATP2B4-201ENST00000341360 CHCHD10Q8WYQ3 142 aaPredicted RBP5.77□□□□□ -1.49
ATP2B4-201ENST00000341360 LINC00474Q9P2X8 69 aa5.77□□□□□ -1.49
ATP2B4-201ENST00000341360 ATP5EP2Q5VTU8 51 aa5.76□□□□□ -1.49
ATP2B4-201ENST00000341360 SPANXB1Q9NS25 103 aaPredicted RBP5.76□□□□□ -1.49
ATP2B4-201ENST00000341360 TRBV27A0A0K0K1C4 114 aa5.76□□□□□ -1.49
ATP2B4-201ENST00000341360 ASPHD1Q5U4P2 390 aa5.76□□□□□ -1.49
ATP2B4-201ENST00000341360 HCFC1P51610 2035 aa5.76□□□□□ -1.49
ATP2B4-201ENST00000341360 K7ERJ3 54 aa5.75□□□□□ -1.49
ATP2B4-201ENST00000341360 LECT2O14960 151 aa5.75□□□□□ -1.49
ATP2B4-201ENST00000341360 P0DMU3 169 aa5.75□□□□□ -1.49
ATP2B4-201ENST00000341360 FAM231AP0DMU4 169 aa5.75□□□□□ -1.49
ATP2B4-201ENST00000341360 FAM231CP0DMU5 169 aa5.75□□□□□ -1.49
ATP2B4-201ENST00000341360 U3KQK5 164 aa5.75□□□□□ -1.49
ATP2B4-201ENST00000341360 MRPS36P82909 103 aaKnown RBP5.75□□□□□ -1.49
ATP2B4-201ENST00000341360 SYCNQ0VAF6 134 aa5.75□□□□□ -1.49
ATP2B4-201ENST00000341360 ESM1Q9NQ30 184 aa5.75□□□□□ -1.49
ATP2B4-201ENST00000341360 SS18L2Q9UHA2 77 aa5.75□□□□□ -1.49
ATP2B4-201ENST00000341360 USP9XQ93008 2570 aaPredicted RBP5.75□□□□□ -1.49
ATP2B4-201ENST00000341360 FAM110AQ9BQ89 295 aa5.75□□□□□ -1.49
ATP2B4-201ENST00000341360 KLLNB2CW77 178 aa5.75□□□□□ -1.49
ATP2B4-201ENST00000341360 CFAP126Q5VTH2 177 aa5.75□□□□□ -1.49
ATP2B4-201ENST00000341360 LINC00269Q8N2A0 174 aa5.75□□□□□ -1.49
ATP2B4-201ENST00000341360 IGHV4-4A0A075B6R2 117 aa5.74□□□□□ -1.49
ATP2B4-201ENST00000341360 F8WDY8 70 aa5.74□□□□□ -1.49
ATP2B4-201ENST00000341360 CHKB-CPT1BH3BT56 60 aa5.74□□□□□ -1.49
ATP2B4-201ENST00000341360 C1orf229Q6ZS94 237 aaPredicted RBP5.74□□□□□ -1.49
ATP2B4-201ENST00000341360 NEXN-AS1Q8NBZ9 246 aa5.74□□□□□ -1.49
ATP2B4-201ENST00000341360 CD164L2Q6UWJ8 174 aa5.74□□□□□ -1.49
ATP2B4-201ENST00000341360 M0QY20 66 aa5.74□□□□□ -1.49
ATP2B4-201ENST00000341360 ZNF80P51504 273 aaPredicted RBP5.74□□□□□ -1.49
ATP2B4-201ENST00000341360 FN1P02751 2386 aaKnown RBP5.74□□□□□ -1.49
ATP2B4-201ENST00000341360 C2orf91Q6ZV80 131 aa5.74□□□□□ -1.49
ATP2B4-201ENST00000341360 NUPR2A6NF83 97 aa5.73□□□□□ -1.49
ATP2B4-201ENST00000341360 NCR3O14931 201 aa5.73□□□□□ -1.49
ATP2B4-201ENST00000341360 DEFB4AO15263 64 aa5.73□□□□□ -1.49
ATP2B4-201ENST00000341360 C16orf95Q9H693 158 aa5.73□□□□□ -1.49
ATP2B4-201ENST00000341360 C22orf34Q6ZV56 151 aa5.73□□□□□ -1.49
ATP2B4-201ENST00000341360 IGLV4-3A0A075B6K6 122 aa5.73□□□□□ -1.49
ATP2B4-201ENST00000341360 CDH23Q9H251 3354 aa5.73□□□□□ -1.49
ATP2B4-201ENST00000341360 IGLV4-69A0A075B6H9 119 aa5.72□□□□□ -1.49
ATP2B4-201ENST00000341360 COX17Q14061 63 aa5.72□□□□□ -1.49
ATP2B4-201ENST00000341360 LINC00643Q86TS7 51 aa5.72□□□□□ -1.49
ATP2B4-201ENST00000341360 FXYD2P54710 66 aa5.72□□□□□ -1.49
ATP2B4-201ENST00000341360 URB1-AS1Q96HZ7 61 aa5.72□□□□□ -1.49
ATP2B4-201ENST00000341360 DHRS4-AS1Q9P1J3 65 aa5.72□□□□□ -1.49
ATP2B4-201ENST00000341360 USP9YO00507 2555 aaPredicted RBP5.72□□□□□ -1.49
ATP2B4-201ENST00000341360 IGHV4-28A0A0C4DH34 117 aa5.72□□□□□ -1.49
ATP2B4-201ENST00000341360 C9orf85Q96MD7 179 aa5.72□□□□□ -1.49
ATP2B4-201ENST00000341360 LINC00467Q9BRT7 94 aa5.71□□□□□ -1.49
ATP2B4-201ENST00000341360 ADAMTS20P59510 1910 aa5.71□□□□□ -1.5
ATP2B4-201ENST00000341360 ZNF22P17026 224 aaPredicted RBP5.71□□□□□ -1.5
ATP2B4-201ENST00000341360 CNFNQ9BYD5 112 aa5.71□□□□□ -1.5
ATP2B4-201ENST00000341360 LOC107984640A0A0U1RRK4 108 aa5.71□□□□□ -1.5
ATP2B4-201ENST00000341360 TMEM223A0PJW6 202 aa5.71□□□□□ -1.5
ATP2B4-201ENST00000341360 IGLV2-11P01706 119 aa5.71□□□□□ -1.5
ATP2B4-201ENST00000341360 KPRPQ5T749 579 aaPredicted RBP5.71□□□□□ -1.5
ATP2B4-201ENST00000341360 C20orf173Q96LM9 149 aa5.71□□□□□ -1.5
ATP2B4-201ENST00000341360 UPK3BQ9BT76 320 aa5.71□□□□□ -1.5
ATP2B4-201ENST00000341360 TP73-AS1Q9UF72 201 aa5.71□□□□□ -1.5
ATP2B4-201ENST00000341360 BPY2O14599 106 aa5.7□□□□□ -1.5
ATP2B4-201ENST00000341360 PRR14LQ5THK1 2151 aa5.7□□□□□ -1.5
ATP2B4-201ENST00000341360 HIGD2AQ9BW72 106 aa5.7□□□□□ -1.5
ATP2B4-201ENST00000341360 CDKN2A-AS1Q9UH64 79 aa5.7□□□□□ -1.5
ATP2B4-201ENST00000341360 M0R378 163 aa5.7□□□□□ -1.5
ATP2B4-201ENST00000341360 DEFB1P60022 68 aa5.7□□□□□ -1.5
ATP2B4-201ENST00000341360 IGKV2-24A0A0C4DH68 120 aa5.7□□□□□ -1.5
ATP2B4-201ENST00000341360 SEC61GP60059 68 aa5.69□□□□□ -1.5
ATP2B4-201ENST00000341360 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP5.69□□□□□ -1.5
ATP2B4-201ENST00000341360 A0A087WZ39 114 aa5.69□□□□□ -1.5
ATP2B4-201ENST00000341360 FAM19A1Q7Z5A9 133 aa5.69□□□□□ -1.5
ATP2B4-201ENST00000341360 DCANP1Q8TF63 244 aa5.69□□□□□ -1.5
ATP2B4-201ENST00000341360 IGLV1-51P01701 117 aa5.69□□□□□ -1.5
ATP2B4-201ENST00000341360 WFDC2Q14508 124 aa5.69□□□□□ -1.5
ATP2B4-201ENST00000341360 PTH2Q96A98 100 aa5.69□□□□□ -1.5
ATP2B4-201ENST00000341360 FOXI1Q12951 378 aa5.68□□□□□ -1.5
ATP2B4-201ENST00000341360 LINC00482Q8N8I6 264 aa5.68□□□□□ -1.5
ATP2B4-201ENST00000341360 LINC00308Q8TCZ7 52 aa5.68□□□□□ -1.5
ATP2B4-201ENST00000341360 TRBV30A0A0K0K1B3 111 aa5.68□□□□□ -1.5
ATP2B4-201ENST00000341360 H0Y9J4 135 aa5.68□□□□□ -1.5
ATP2B4-201ENST00000341360 POLR2KP53803 58 aaKnown RBP5.68□□□□□ -1.5
ATP2B4-201ENST00000341360 NHLRC4P0CG21 123 aaPredicted RBP5.68□□□□□ -1.5
ATP2B4-201ENST00000341360 Q8IZM0 81 aa5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms