RNA–Protein interactions for RNA: ENST00000339865.9

USP47-202, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 2 BASIC

Gene USP47, Length 7,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-202ENST00000339865 CELA1Q9UNI1 258 aa9.79□□□□□ -0.84
USP47-202ENST00000339865 COL5A1P20908 1838 aaPredicted RBP9.79□□□□□ -0.84
USP47-202ENST00000339865 PPDPFQ9H3Y8 114 aa9.79□□□□□ -0.84
USP47-202ENST00000339865 ANKHD1Q8IWZ3 2542 aaKnown RBP9.78□□□□□ -0.84
USP47-202ENST00000339865 PRSS33Q8NF86 280 aa9.78□□□□□ -0.84
USP47-202ENST00000339865 RETNLBQ9BQ08 111 aa9.78□□□□□ -0.84
USP47-202ENST00000339865 K7EIM0 57 aa9.78□□□□□ -0.84
USP47-202ENST00000339865 REG3AQ06141 175 aa9.78□□□□□ -0.84
USP47-202ENST00000339865 CRYGDP07320 174 aa9.78□□□□□ -0.84
USP47-202ENST00000339865 FOXL2NBQ6ZUU3 175 aa9.77□□□□□ -0.84
USP47-202ENST00000339865 FN1P02751 2386 aaKnown RBP9.77□□□□□ -0.84
USP47-202ENST00000339865 FRMD6-AS1P0C7T7 363 aa9.77□□□□□ -0.85
USP47-202ENST00000339865 NHSL1Q5SYE7 1610 aa9.77□□□□□ -0.85
USP47-202ENST00000339865 IGLV2-11P01706 119 aa9.77□□□□□ -0.85
USP47-202ENST00000339865 PRO0255Q9UI72 69 aa9.77□□□□□ -0.85
USP47-202ENST00000339865 I3L2K1 104 aa9.77□□□□□ -0.85
USP47-202ENST00000339865 C6orf99Q4VX62 202 aa9.77□□□□□ -0.85
USP47-202ENST00000339865 TRBV6-5A0A0K0K1A5 114 aa9.77□□□□□ -0.85
USP47-202ENST00000339865 SMIM9A6NGZ8 99 aa9.77□□□□□ -0.85
USP47-202ENST00000339865 IGLV9-49A0A0B4J1Y8 123 aa9.76□□□□□ -0.85
USP47-202ENST00000339865 IGHV7-81A0A0B4J1V7 117 aa9.76□□□□□ -0.85
USP47-202ENST00000339865 LINC00467Q9BRT7 94 aa9.76□□□□□ -0.85
USP47-202ENST00000339865 DNAJC9-AS1A6NH13 148 aa9.76□□□□□ -0.85
USP47-202ENST00000339865 C20orf203Q8NBC4 194 aa9.76□□□□□ -0.85
USP47-202ENST00000339865 SPRY4Q9C004 299 aa9.76□□□□□ -0.85
USP47-202ENST00000339865 C1orf147Q96MC9 270 aaPredicted RBP9.75□□□□□ -0.85
USP47-202ENST00000339865 FAM167A-AS1Q96KT0 104 aa9.75□□□□□ -0.85
USP47-202ENST00000339865 TRBV10-1A0A0K0K1A3 114 aa9.75□□□□□ -0.85
USP47-202ENST00000339865 LINC00337Q8N6G1 96 aa9.75□□□□□ -0.85
USP47-202ENST00000339865 IGLV11-55A0A075B6I3 123 aa9.74□□□□□ -0.85
USP47-202ENST00000339865 ZNF503-AS2A6NEH8 195 aa9.74□□□□□ -0.85
USP47-202ENST00000339865 MRPS36P82909 103 aaKnown RBP9.74□□□□□ -0.85
USP47-202ENST00000339865 LINC00308Q8TCZ7 52 aa9.74□□□□□ -0.85
USP47-202ENST00000339865 TP73-AS1Q9UF72 201 aa9.74□□□□□ -0.85
USP47-202ENST00000339865 CDKN2A-AS1Q9UH64 79 aa9.74□□□□□ -0.85
USP47-202ENST00000339865 BEAN1Q3B7T3 259 aa9.74□□□□□ -0.85
USP47-202ENST00000339865 CHCHD10Q8WYQ3 142 aaPredicted RBP9.74□□□□□ -0.85
USP47-202ENST00000339865 COL4A1P02462 1669 aa9.74□□□□□ -0.85
USP47-202ENST00000339865 TRBV30A0A0K0K1B3 111 aa9.74□□□□□ -0.85
USP47-202ENST00000339865 CSDC2Q9Y534 153 aaKnown RBP9.73□□□□□ -0.85
USP47-202ENST00000339865 IGF1P05019 195 aa9.73□□□□□ -0.85
USP47-202ENST00000339865 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.73□□□□□ -0.85
USP47-202ENST00000339865 LINC00208Q96KT6 92 aa9.73□□□□□ -0.85
USP47-202ENST00000339865 DEFB131BA0A096LNP1 70 aa9.72□□□□□ -0.85
USP47-202ENST00000339865 WDR90Q96KV7 1748 aa9.72□□□□□ -0.85
USP47-202ENST00000339865 CIRBP-AS1Q8TBR5 109 aa9.72□□□□□ -0.85
USP47-202ENST00000339865 A8MZ25 164 aa9.71□□□□□ -0.85
USP47-202ENST00000339865 C5orf56Q8N8D9 126 aa9.71□□□□□ -0.85
USP47-202ENST00000339865 TLN1Q9Y490 2541 aaKnown RBP9.71□□□□□ -0.85
USP47-202ENST00000339865 PATE2Q6UY27 113 aa9.71□□□□□ -0.85
USP47-202ENST00000339865 TRAV7A0A075B6U4 112 aa9.71□□□□□ -0.86
USP47-202ENST00000339865 SPINK1P00995 79 aa9.71□□□□□ -0.86
USP47-202ENST00000339865 CFAP126Q5VTH2 177 aa9.71□□□□□ -0.86
USP47-202ENST00000339865 CPAMD8Q8IZJ3 1885 aa9.71□□□□□ -0.86
USP47-202ENST00000339865 TP53TG3Q9ULZ0 132 aa9.7□□□□□ -0.86
USP47-202ENST00000339865 ESRGQ1W209 222 aa9.7□□□□□ -0.86
USP47-202ENST00000339865 IBA57-AS1B1ANH7 110 aa9.7□□□□□ -0.86
USP47-202ENST00000339865 LY6LH3BQJ8 138 aa9.7□□□□□ -0.86
USP47-202ENST00000339865 Q6ZQY7 126 aa9.69□□□□□ -0.86
USP47-202ENST00000339865 RPL37AP8A6NKH3 93 aa9.69□□□□□ -0.86
USP47-202ENST00000339865 CRYGAP11844 174 aa9.69□□□□□ -0.86
USP47-202ENST00000339865 RBX1P62877 108 aa9.69□□□□□ -0.86
USP47-202ENST00000339865 MAPKAPK5-AS1Q8N8E1 139 aa9.69□□□□□ -0.86
USP47-202ENST00000339865 IGLV1-44P01699 117 aa9.69□□□□□ -0.86
USP47-202ENST00000339865 XGP55808 180 aa9.69□□□□□ -0.86
USP47-202ENST00000339865 Q8N976 141 aa9.69□□□□□ -0.86
USP47-202ENST00000339865 CTSZQ9UBR2 303 aa9.68□□□□□ -0.86
USP47-202ENST00000339865 A6NDX4 124 aa9.68□□□□□ -0.86
USP47-202ENST00000339865 SMIM11BQ8TCY0 68 aa9.68□□□□□ -0.86
USP47-202ENST00000339865 J3QL48 77 aa9.68□□□□□ -0.86
USP47-202ENST00000339865 RSPO1Q2MKA7 263 aaPredicted RBP9.67□□□□□ -0.86
USP47-202ENST00000339865 LOC107984640A0A0U1RRK4 108 aa9.67□□□□□ -0.86
USP47-202ENST00000339865 NEXN-AS1Q8NBZ9 246 aa9.67□□□□□ -0.86
USP47-202ENST00000339865 SPAG11AQ6PDA7 123 aa9.67□□□□□ -0.86
USP47-202ENST00000339865 SPRNQ5BIV9 151 aa9.66□□□□□ -0.86
USP47-202ENST00000339865 IGLV4-3A0A075B6K6 122 aa9.66□□□□□ -0.86
USP47-202ENST00000339865 H7C423 109 aa9.66□□□□□ -0.86
USP47-202ENST00000339865 LINC01547P58512 204 aaPredicted RBP9.66□□□□□ -0.86
USP47-202ENST00000339865 Q6ZTI0 123 aa9.66□□□□□ -0.86
USP47-202ENST00000339865 PLA2G2EQ9NZK7 142 aa9.66□□□□□ -0.86
USP47-202ENST00000339865 INSL3P51460 131 aa9.66□□□□□ -0.86
USP47-202ENST00000339865 UNQ9165/PRO28630Q6UXU0 137 aa9.65□□□□□ -0.86
USP47-202ENST00000339865 PCOTHQ58A44 107 aa9.65□□□□□ -0.86
USP47-202ENST00000339865 A0A1B0GXF2 115 aa9.65□□□□□ -0.87
USP47-202ENST00000339865 C4orf3Q8WVX3 66 aa9.65□□□□□ -0.87
USP47-202ENST00000339865 E7EUB6 86 aa9.65□□□□□ -0.87
USP47-202ENST00000339865 C10orf25Q5T742 122 aa9.65□□□□□ -0.87
USP47-202ENST00000339865 PKD1L2Q7Z442 2459 aa9.65□□□□□ -0.87
USP47-202ENST00000339865 C17orf82Q86X59 251 aaPredicted RBP9.64□□□□□ -0.87
USP47-202ENST00000339865 LINC00526Q96FQ7 95 aa9.64□□□□□ -0.87
USP47-202ENST00000339865 C19orf71A6NCJ1 209 aa9.64□□□□□ -0.87
USP47-202ENST00000339865 DHRS4-AS1Q9P1J3 65 aa9.64□□□□□ -0.87
USP47-202ENST00000339865 IGLV2-14P01704 120 aa9.64□□□□□ -0.87
USP47-202ENST00000339865 A0A0J9YX75 114 aa9.64□□□□□ -0.87
USP47-202ENST00000339865 LOC100131303A0A0U1RQF7 123 aa9.63□□□□□ -0.87
USP47-202ENST00000339865 K7EMT4 169 aa9.63□□□□□ -0.87
USP47-202ENST00000339865 TRBV7-7A0A0K0K1E9 115 aa9.63□□□□□ -0.87
USP47-202ENST00000339865 ZNF22P17026 224 aaPredicted RBP9.63□□□□□ -0.87
USP47-202ENST00000339865 GRNP28799 593 aaKnown RBP9.63□□□□□ -0.87
USP47-202ENST00000339865 SPINT4Q6UDR6 99 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms